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1481por Pallikkuth, Suresh, Chaudhury, Sidhartha, Lu, Pinyi, Pan, Li, Jongert, Erik, Wille-Reece, Ulrike, Pahwa, Savita“…Here, we show that protection in both study arms was associated with early induction of functional IL-21-secreting circumsporozoite (CSP)-specific pTfh cells, together with induction of CSP-specific memory B cell responses after the second dose that persisted after the third dose. Data integration of key immunologic measures identified a subset of non-protected individuals in the standard (STD) vaccine arm who lost prior protective B cell responses after receiving the third vaccine dose. …”
Publicado 2020
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1482“…Collectively, our results demonstrate that TFSEE is a robust enhancer-calling algorithm that can be used to perform multilayer genomic data integration to uncover cell type-specific TFs that control lineage-specific enhancers.…”
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1483por Rabadán, Raúl, Mohamedi, Yamina, Rubin, Udi, Chu, Tim, Alghalith, Adam N., Elliott, Oliver, Arnés, Luis, Cal, Santiago, Obaya, Álvaro J., Levine, Arnold J., Cámara, Pablo G.“…Our results demonstrate that data integration through topological techniques can increase our ability to identify previously unreported cancer-related alterations.…”
Publicado 2020
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1484por Borcier, Elodie, Charrier, Grégory, Couteau, Jérôme, Maillet, Géraldine, Le Grand, Fabienne, Bideau, Antoine, Waeles, Matthieu, Le Floch, Stéphane, Amara, Rachid, Pichereau, Vianney, Laroche, Jean“…Douarnenez fish. The data integration allowed to hypothesize relationships between membrane phospholipids, xenobiotic metabolism, bioenergetics, and antioxidant defence. …”
Publicado 2020
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1485“…We observe that several LSLOD sources exist as stand-alone data sources that are not inter-linked with other sources, use unpublished schemas with minimal reuse or mappings, and have elements that are not useful for data integration from a biomedical perspective. We envision that the LSLOD schema graph and the findings from this research will aid researchers who wish to query and integrate data and knowledge from multiple biomedical sources simultaneously on the Web.…”
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1486por Jaiswal, Alok, Gautam, Prson, Pietilä, Elina A, Timonen, Sanna, Nordström, Nora, Akimov, Yevhen, Sipari, Nina, Tanoli, Ziaurrehman, Fleischer, Thomas, Lehti, Kaisa, Wennerberg, Krister, Aittokallio, Tero“…To account for a relatively low consistency observed for certain data modalities, we developed a robust data integration approach that identifies reproducible signals shared among multiple data modalities and studies. …”
Publicado 2021
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1487“…The original raw radar data are available from the “XRAIN Precipitation Original Data search and Download System”, which is hosted on the website “Data Integration and Analysis System (DIAS)”. Animated images of the radar data shown here, which provide a visual explanation of the temporal evolution and the inner structure of volcanic eruption clouds, were created using the program “Analysis Tools of Three-dimensional Weather Radar Data (AN3D)”. …”
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1488“…This raises the question of data integration methods and tools. These approaches allow us to increase our knowledge on immune mechanisms as well as the identification of key effectors of the immune response. …”
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1489por Schoof, Erwin M., Furtwängler, Benjamin, Üresin, Nil, Rapin, Nicolas, Savickas, Simonas, Gentil, Coline, Lechman, Eric, Keller, Ulrich auf dem, Dick, John E., Porse, Bo T.“…Furthermore, we develop a computational workflow (SCeptre) that effectively normalizes the data, integrates available FACS data and facilitates downstream analysis. …”
Publicado 2021
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1490por Cox, Simon J. D., Gonzalez-Beltran, Alejandra N., Magagna, Barbara, Marinescu, Maria-Cristina“…In turn, this increases data interoperability and enables data integration.…”
Publicado 2021
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1491por Lange, Mike, Angelidou, Georgia, Ni, Zhixu, Criscuolo, Angela, Schiller, Jürgen, Blüher, Matthias, Fedorova, Maria“…AdipoAtlas reference lipidome serves as a data-rich resource for the development of WAT-specific high-throughput methods and as a scaffold for systems medicine data integration.…”
Publicado 2021
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1492“…These findings open up new venues to apply network-based tools for cross-scale data integration.…”
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1493“…Technologies that measure multiple modalities of such data add more detail, but they also complicate data integration. We offer an integrated analysis of the spatial location and gene expression profiles of cells to determine their identity. …”
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1494por Wu, Junru, Vodovotz, Yoram, Abdelhamid, Sultan, Guyette, Francis X., Yaffe, Michael B., Gruen, Danielle S., Cyr, Anthony, Okonkwo, David O., Kar, Upendra K., Krishnamoorthi, Neha, Voinchet, Robert G., Billiar, Isabel M., Yazer, Mark H., Namas, Rami A., Daley, Brian J., Miller, Richard S., Harbrecht, Brian G., Claridge, Jeffrey A., Phelan, Herbert A., Zuckerbraun, Brian S., Johansson, Pär I., Stensballe, Jakob, Morrissey, James H., Tracy, Russell P., Wisniewski, Stephen R., Neal, Matthew D., Sperry, Jason L., Billiar, Timothy R.“…A “systemic storm” pattern with release of 1,061 markers, together with a pattern suggestive of the “massive consumption” of 892 constitutive circulating markers, is identified in the acute phase post-trauma. Data integration reveals two human injury response endotypes, which align with clinical trajectory. …”
Publicado 2021
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1495por Schriml, Lynn M, Munro, James B, Schor, Mike, Olley, Dustin, McCracken, Carrie, Felix, Victor, Baron, J Allen, Jackson, Rebecca, Bello, Susan M, Bearer, Cynthia, Lichenstein, Richard, Bisordi, Katharine, Dialo, Nicole Campion, Giglio, Michelle, Greene, Carol“…The DO, funded as a NHGRI Genomic Resource, plays a key role in disease knowledge organization, representation, and standardization, serving as a reference framework for multiscale biomedical data integration and analysis across thousands of clinical, biomedical and computational research projects and genomic resources around the world. …”
Publicado 2021
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1496“…Secondly, we employ data integration to merge information from: (i) SNV density; (ii) SNVs in driver genes and (iii) trinucleotide motifs. …”
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1497“…Adverse Outcome Pathways (AOPs) are a research synthesis tool, used primarily by toxicologists for numerous applications including: hypothesis generation, data integration, biomarker determination, and identification of gaps in current knowledge. …”
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1498por Costanzo, Michele, Caterino, Marianna, Fedele, Roberta, Cevenini, Armando, Pontillo, Mariarca, Barra, Lucia, Ruoppolo, Margherita“…Exploring the multiomics perspective and the concurrent data integration may provide new suitable therapeutic solutions to combat the COVID-19 pandemic.…”
Publicado 2022
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1499“…Expanding on this, our review initially focuses on the recent computational strategies aiming at investigating protein–protein interfaces in a dynamic fashion using enhanced sampling, multi-scale modeling, and experimental data integration. Then, we discuss how interface dynamics report on the function of protein assemblies in globular complexes, in fuzzy complexes containing intrinsically disordered proteins, as well as in active complexes, where chemical reactions take place across the protein–protein interface.…”
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1500“…Furthermore, we show that crossmodal generation by scMM leads to more precise prediction and data integration compared with the state-of-the-art and conventional approaches.…”
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