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1521por Adli, Hasyiya Karimah, Remli, Muhammad Akmal, Wan Salihin Wong, Khairul Nizar Syazwan, Ismail, Nor Alina, González-Briones, Alfonso, Corchado, Juan Manuel, Mohamad, Mohd Saberi“…An IoT system provides data flow to AI techniques for data integration and interpretation as well as for the performance of automatic image analysis and data prediction. …”
Publicado 2023
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1522por Lee, Andrew J., Kim, Changyoun, Park, Seongwan, Joo, Jaegeon, Choi, Baekgyu, Yang, Dongchan, Jun, Kyoungho, Eom, Junghyun, Lee, Seung-Jae, Chung, Sun Ju, Rissman, Robert A., Chung, Jongkyeong, Masliah, Eliezer, Jung, Inkyung“…Here, we establish transcriptomic and epigenomic landscapes of the substantia nigra by profiling 113,207 nuclei obtained from healthy controls and patients with PD. Our multiomics data integration provides cell type annotation of 128,724 cis-regulatory elements (cREs) and uncovers cell type–specific dysregulations in cREs with a strong transcriptional influence on genes implicated in PD. …”
Publicado 2023
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1523“…GEMs can also be tailored to generate context-specific GEMs, using omics data integration approaches. To date, many integration approaches have been developed, however, each with specific pros and cons; and none of these algorithms systematically outperforms the others. …”
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1524“…Sensor ontology matching achieves data integration and sharing between sensors by establishing semantic relationships between sensor devices. …”
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1525por Martins, Ivis Levy Fernandes, Almeida, Flávia Valéria dos Santos, de Souza, Karyne Pollo, de Brito, Fernanda Carla Ferreira, Rodrigues, Gabriel Dias, Scaramello, Christianne Bretas Vieira“…Essential concepts involved in network medicine are highlighted, and specific research applying network medicine to study AF is discussed. Additionally, data integration through literature mining and bioinformatics tools, with network building, is exemplified. …”
Publicado 2023
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1526por Guo, Minzhe, Morley, Michael P., Jiang, Cheng, Wu, Yixin, Li, Guangyuan, Du, Yina, Zhao, Shuyang, Wagner, Andrew, Cakar, Adnan Cihan, Kouril, Michal, Jin, Kang, Gaddis, Nathan, Kitzmiller, Joseph A., Stewart, Kathleen, Basil, Maria C., Lin, Susan M., Ying, Yun, Babu, Apoorva, Wikenheiser-Brokamp, Kathryn A., Mun, Kyu Shik, Naren, Anjaparavanda P., Clair, Geremy, Adkins, Joshua N., Pryhuber, Gloria S., Misra, Ravi S., Aronow, Bruce J., Tickle, Timothy L., Salomonis, Nathan, Sun, Xin, Morrisey, Edward E., Whitsett, Jeffrey A., Xu, Yan“…Single-cell references with comprehensive cell types, reproducible and functionally validated cell identities, and common nomenclatures are much needed by the research community for automated cell type annotation, data integration, and data sharing. Here, we develop a computational pipeline utilizing the LungMAP CellCards as a dictionary to consolidate single-cell transcriptomic datasets of 104 human lungs and 17 mouse lung samples to construct LungMAP single-cell reference (CellRef) for both normal human and mouse lungs. …”
Publicado 2023
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1527“…While issues with standardisation, ethics, and data integration continue, collaboration within research, clinical practice, and policy realms fuels positive developments. …”
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1528“…These tools capture structured data, integrate into electronic health records, and create summary reports in real time to assist decision-making. …”
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1529por Qiu, Yinguo, Liu, Hao, Liu, Jiaxin, Li, Dexin, Liu, Chengzhao, Liu, Weixin, Wang, Jindi, Jiao, Yaqin“…Experimental results demonstrate the satisfying frequency of video-based HAB monitoring (once per second) and the valuable results of multi-source data integration and analysis for HAB management. This study demonstrated the high value of the constructed DTLF in accurate monitoring and scientific management of HABs in lakes.…”
Publicado 2023
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1530por Noy, Natalya F., Shah, Nigam H., Whetzel, Patricia L., Dai, Benjamin, Dorf, Michael, Griffith, Nicholas, Jonquet, Clement, Rubin, Daniel L., Storey, Margaret-Anne, Chute, Christopher G., Musen, Mark A.“…Biomedical ontologies provide essential domain knowledge to drive data integration, information retrieval, data annotation, natural-language processing and decision support. …”
Publicado 2009
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1531por Weile, Jochen, Pocock, Matthew, Cockell, Simon J., Lord, Phillip, Dewar, James M., Holstein, Eva−Maria, Wilkinson, Darren, Lydall, David, Hallinan, Jennifer, Wipat, Anil“…Results: We have created an integrated dataset for Saccharomyces cerevisiae using the semantic data integration tool Ondex, and have developed a view-based visualization technique that allows for concise graphical representations of the integrated data. …”
Publicado 2011
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1532por Cantarel, Brandi L., Erickson, Alison R., VerBerkmoes, Nathan C., Erickson, Brian K., Carey, Patricia A., Pan, Chongle, Shah, Manesh, Mongodin, Emmanuel F., Jansson, Janet K., Fraser-Liggett, Claire M., Hettich, Robert L.“…Accurate protein identification in large-scale proteomics experiments relies upon a detailed, accurate protein catalogue, which is derived from predictions of open reading frames based on genome sequence data. Integration of mass spectrometry-based proteomics data with computational proteome predictions from environmental metagenomic sequences has been challenging because of the variable overlap between proteomic datasets and corresponding short-read nucleotide sequence data. …”
Publicado 2011
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1533por Köhler, Sebastian, Bauer, Sebastian, Mungall, Chris J, Carletti, Gabriele, Smith, Cynthia L, Schofield, Paul, Gkoutos, Georgios V, Robinson, Peter N“…A recent approach of defining terms using logical definitions is now increasingly being adopted as a method for quality control as well as for facilitating interoperability and data integration. RESULTS: We show how automated reasoning over logical definitions of ontology terms can be used to improve ontology structure. …”
Publicado 2011
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1534“…This can be facilitated by putting accessible and automated approaches analysing the current wealth of ‘omic’-scale data in the hands of researchers who are directly addressing biological questions. Data integration techniques and standardized, automated, high-throughput analyses are needed to manage the data available as well as to help narrow down the excessive number of target gene possibilities presented by modern databases and system-level resources. …”
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1535“…Finally, we briefly discuss the use of multi-platform data integration for probing the nature of metabolic and regulatory systems underlying VOC emissions.…”
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1536por McClellan, Elizabeth A., Moerland, Perry D., van der Spek, Peter J., Stubbs, Andrew P.“…NetWeAvers is an R package that provides a novel method for analyzing proteomics data integrated with biological networks. The method includes an algorithm for finding dense clusters of proteins and a permutation algorithm to calculate cluster P-values. …”
Publicado 2013
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1537“…We describe the coding schema and key system features as well as several development challenges, including data integration, development of a final data structure from three separate ontologies, and ways to develop consensus about codes among program staff.…”
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1538“…BACKGROUND: With the increased use of ontologies and ontology mappings in semantically-enabled applications such as ontology-based search and data integration, the issue of detecting and repairing defects in ontologies and ontology mappings has become increasingly important. …”
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1539“…The results suggest that the expansion of the feature space through the data integration, achieved by the exploitation of imputation schemes in general, aids the classification task, imparting stability as regards the derivation of putative classifiers. …”
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1540por Arbuckle, Benjamin S., Kansa, Sarah Whitcher, Kansa, Eric, Orton, David, Çakırlar, Canan, Gourichon, Lionel, Atici, Levent, Galik, Alfred, Marciniak, Arkadiusz, Mulville, Jacqui, Buitenhuis, Hijlke, Carruthers, Denise, De Cupere, Bea, Demirergi, Arzu, Frame, Sheelagh, Helmer, Daniel, Martin, Louise, Peters, Joris, Pöllath, Nadja, Pawłowska, Kamilla, Russell, Nerissa, Twiss, Katheryn, Würtenberger, Doris“…This study presents the results of a major data integration project bringing together primary archaeozoological data for over 200,000 faunal specimens excavated from seventeen sites in Turkey spanning the Epipaleolithic through Chalcolithic periods, c. 18,000-4,000 cal BC, in order to document the initial westward spread of domestic livestock across Neolithic central and western Turkey. …”
Publicado 2014
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