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1541“…The advent of next generation sequencing and other high throughput methods has led to a major increase in availability of biological data. Integration of such disparate data can help define the emergent metabolic system properties, which is of crucial importance in addressing biofuel production optimization. …”
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1542“…In this study, we used three gridded rainfall datasets: 1) National Centers for Environmental Prediction - Climate Forecast System Reanalysis (NCEP-CFSR); 2) Asian Precipitation - Highly-Resolved Observational Data Integration Towards Evaluation (APHRODITE); and 3) China trend - surface reanalysis (trend surface) data. …”
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1543“…Our machine reading approach to scientific data integration and synthesis brings within reach many questions that are currently underdetermined and does so in ways that may stimulate entirely new modes of inquiry.…”
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1544por Daniel, Christel, Sinaci, Anil, Ouagne, David, Sadou, Eric, Declerck, Gunnar, Kalra, Dipak, Charlet, Jean, Forsberg, Kerstin, Bain, Landen, Mead, Charlie, Hussain, Sajjad, Laleci Erturkmen, Gokce B.“…Integration profiles collaboratively developed by CDISC and IHE for integrating data from Electronic Health Records (EHRs) with clinical research and pharmacovigilance are limited to resolving lexical/syntactic data integration issues and do not address semantic barriers. …”
Publicado 2014
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1545“…These might be thought of as being challenges related to samples (processing and scale for analysis), sensitivity and specificity of mutation detection, sources of heterogeneity (biological and technical), synergies (from data integration) and systems modelling. We discuss these in the context of recent advances in technologies and data modelling, concluding with implications for moving cancer research into the clinic.…”
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1546por Wheeler, Diek W, White, Charise M, Rees, Christopher L, Komendantov, Alexander O, Hamilton, David J, Ascoli, Giorgio A“…Although the hippocampal literature is remarkably information-rich, neuron properties are often reported with incompletely defined and notoriously inconsistent terminology, creating a formidable challenge for data integration. Our extensive literature mining and data reconciliation identified 122 neuron types based on neurotransmitter, axonal and dendritic patterns, synaptic specificity, electrophysiology, and molecular biomarkers. …”
Publicado 2015
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1547“…A large proportion of bioinformatics research tasks, however, may include labor-intensive tasks such as fetching, parsing, and merging datasets and functional annotations from distributed multi-domain databases. This data integration issue is one of the key challenges in bioinformatics. …”
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1548por Axer, Markus, Strohmer, Sven, Gräßel, David, Bücker, Oliver, Dohmen, Melanie, Reckfort, Julia, Zilles, Karl, Amunts, Katrin“…Hence, comprehensible strategies for data integration across modalities and across scales are essential. …”
Publicado 2016
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1549por Sergushichev, Alexey A., Loboda, Alexander A., Jha, Abhishek K., Vincent, Emma E., Driggers, Edward M., Jones, Russell G., Pearce, Edward J., Artyomov, Maxim N.“…While a number of conceptual approaches have been developed for data integration, easily accessible tools for integrated analysis of mammalian steady-state metabolomic and transcriptional data are lacking. …”
Publicado 2016
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1550por Schlomann, Uwe, Koller, Garrit, Conrad, Catharina, Ferdous, Taheera, Golfi, Panagiota, Garcia, Adolfo Molejon, Höfling, Sabrina, Parsons, Maddy, Costa, Patricia, Soper, Robin, Bossard, Maud, Hagemann, Thorsten, Roshani, Rozita, Sewald, Norbert, Ketchem, Randal R., Moss, Marcia L., Rasmussen, Fred H., Miller, Miles A., Lauffenburger, Douglas A., Tuveson, David A., Nimsky, Christopher, Bartsch, Jörg W.“…BK-1361 application in mice decreased tumour burden and metastasis of implanted pancreatic tumour cells and provides improved metrics of clinical symptoms and survival in a Kras(G12D)-driven mouse model of PDAC. Thus, our data integrate ADAM8 in pancreatic cancer signalling and validate ADAM8 as a target for PDAC therapy.…”
Publicado 2015
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1551por Zhang, Yun, Aevermann, Brian D., Anderson, Tavis K., Burke, David F., Dauphin, Gwenaelle, Gu, Zhiping, He, Sherry, Kumar, Sanjeev, Larsen, Christopher N., Lee, Alexandra J., Li, Xiaomei, Macken, Catherine, Mahaffey, Colin, Pickett, Brett E., Reardon, Brian, Smith, Thomas, Stewart, Lucy, Suloway, Christian, Sun, Guangyu, Tong, Lei, Vincent, Amy L., Walters, Bryan, Zaremba, Sam, Zhao, Hongtao, Zhou, Liwei, Zmasek, Christian, Klem, Edward B., Scheuermann, Richard H.“…IRD facilitates the research and development of vaccines, diagnostics and therapeutics against influenza virus by providing a comprehensive collection of influenza-related data integrated from various sources, a growing suite of analysis and visualization tools for data mining and hypothesis generation, personal workbench spaces for data storage and sharing, and active user community support. …”
Publicado 2017
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1552“…Research data archiving solutions are evolving rapidly to address these necessities, however, distributed data integration is still difficult because of the need of explicit agreements for disparate data models. …”
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1553ndmaSNF: cancer subtype discovery based on integrative framework assisted by network diffusion model“…To effectively exploit the value of those data, integrative methods are urgently needed. In this paper, based on SNF (Similarity Network Diffusion) [1], we proposed a new integrative method named ndmaSNF (network diffusion model assisted SNF), which can be used for cancer subtype discovery with the advantage of making use of somatic mutation data and other discrete data. …”
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1554por Sun, Wencheng, Cai, Zhiping, Li, Yangyang, Liu, Fang, Fang, Shengqun, Wang, Guoyan“…Most structured data commonly needs classic preprocessing technologies, including data cleansing, data integration, data transformation, and data reduction. …”
Publicado 2018
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1555por Hatami, Rezvan“…To overcome this problem, a causal modelling method based on spatiotemporal data, integrated with existing statistical methods such as multivariate redundancy analysis, multiple regression and, ordination was used for inferring causal effects of wastewater on biotic ecosystems. …”
Publicado 2018
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1556“…We summarize the benefits of transcriptomic analyses in breast cancer management and propose that unscrambling the core signaling networks of cancer may be an important task of multiple-omic data integration for precision oncology.…”
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1557“…Providing healthcare services in the future will involve the storage and manipulation of large volumes of data (big data) from medical records, requiring the integration of different data sources, for a multitude of purposes, such as prediction, prevention, personalization, participation, and becoming digital. Data integration and data sharing will be essential to achieve these goals. …”
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1558por Weaver, Nick A., Zhao, Lei, Biesbroek, J. Matthijs, Kuijf, Hugo J., Aben, Hugo P., Bae, Hee-Joon, Caballero, Miguel Á.A., Chappell, Francesca M., Chen, Christopher P.L.H., Dichgans, Martin, Duering, Marco, Georgakis, Marios K., van der Giessen, Ruben S., Gyanwali, Bibek, Hamilton, Olivia K.L., Hilal, Saima, vom Hofe, Elise M., de Kort, Paul L.M., Koudstaal, Peter J., Lam, Bonnie Y.K., Lim, Jae-Sung, Makin, Stephen D.J., Mok, Vincent C.T., Shi, Lin, Valdés Hernández, Maria C., Venketasubramanian, Narayanaswamy, Wardlaw, Joanna M., Wollenweber, Frank A., Wong, Adrian, Xin, Xu, Biessels, Geert Jan“…The pilot study (six ischemic stroke cohorts, n = 878) demonstrated feasibility of multicenter data integration (computed tomography/magnetic resonance imaging) and achieved marked improvement of lesion coverage. …”
Publicado 2019
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1559por Shokri, Leila, Inukai, Sachi, Hafner, Antonina, Weinand, Kathryn, Hens, Korneel, Vedenko, Anastasia, Gisselbrecht, Stephen S., Dainese, Riccardo, Bischof, Johannes, Furger, Edy, Feuz, Jean-Daniel, Basler, Konrad, Deplancke, Bart, Bulyk, Martha L.“…Our analysis of ChIP-seq data, integrating PPI and gene expression information, uncovered different modes by which interacting TFs are recruited to DNA. …”
Publicado 2019
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1560por Neveu, Pascal, Tireau, Anne, Hilgert, Nadine, Nègre, Vincent, Mineau‐Cesari, Jonathan, Brichet, Nicolas, Chapuis, Romain, Sanchez, Isabelle, Pommier, Cyril, Charnomordic, Brigitte, Tardieu, François, Cabrera‐Bosquet, Llorenç“…It interoperates with external resources via web services, thereby allowing data integration into other systems; for example, modelling platforms or external databases. …”
Publicado 2018
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