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1661“…Evidence from spatial and predictive analysis suggests geological data integration is highly efficient for geothermal exploration across the middle Benue trough.…”
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1662“…Existing approaches like the Observational Medical Outcomes Partnership are discussed and contrasted with the use of ontologies and systems using them for data integration. The PRescription Drug Ontology 2.0 (PDRO 2.0) is then presented and entities that are paramount in addressing this problematic are described. …”
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1663por Bradford, Yvonne M, Van Slyke, Ceri E, Ruzicka, Leyla, Singer, Amy, Eagle, Anne, Fashena, David, Howe, Douglas G, Frazer, Ken, Martin, Ryan, Paddock, Holly, Pich, Christian, Ramachandran, Sridhar, Westerfield, Monte“…Here, we provide an overview of the data available at the Zebrafish Information Network including recent updates to the gene page to provide access to single-cell RNA sequencing data, links to Alliance web pages, ribbon diagrams to summarize the biological systems and Gene Ontology terms that have annotations, and data integration with the Alliance of Genome Resources.…”
Publicado 2022
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1664por Fraser, Helen C., Kuan, Valerie, Johnen, Ronja, Zwierzyna, Magdalena, Hingorani, Aroon D., Beyer, Andreas, Partridge, Linda“…To address this question, we text mined 917,645 literature abstracts followed by manual curation and found strong, non‐random associations between age‐related diseases and aging mechanisms in humans, confirmed by gene set enrichment analysis of GWAS data. Integration of these associations with clinical data from 3.01 million patients showed that age‐related diseases associated with each of five aging mechanisms were more likely than chance to be present together in patients. …”
Publicado 2022
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1665por Chan, Shi Yu, Ong, Zi Yan, Ngoh, Zhen Ming, Chong, Yap Seng, Zhou, Juan H., Fortier, Marielle V., Daniel, Lourdes M., Qiu, Anqi, Meaney, Michael J., Tan, Ai Peng“…Our study also highlights the utility of multimodal imaging data integration when studying the effects of reward network functional flexibility in the preschool age, a critical period in brain and executive function development.…”
Publicado 2022
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1666“…This paper addresses the topics of data generation, data quality, (meta)data standards, data storage and archiving and data integration and exchange.…”
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1667por Favero, Francesco, Barberis, Elettra, Gagliardi, Mara, Espinoza, Stefano, Contu, Liliana, Gustincich, Stefano, Boccafoschi, Francesca, Borsotti, Chiara, Lim, Dmitry, Rubino, Vito, Mignone, Flavio, Pasolli, Edoardo, Manfredi, Marcello, Zucchelli, Silvia, Corà, Davide, Corazzari, Marco“…Moreover, AD mice showed a significant decrease of some amino acids, while data integration revealed a dysregulated production of desaminotyrosine (DAT) and dihydro-3-coumaric acid. …”
Publicado 2022
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1668por Marino, Carmen, Grimaldi, Manuela, Sommella, Eduardo Maria, Ciaglia, Tania, Santoro, Angelo, Buonocore, Michela, Salviati, Emanuela, Trojsi, Francesca, Polverino, Arianna, Sorrentino, Pierpaolo, Sorrentino, Giuseppe, Campiglia, Pietro, D’Ursi, Anna Maria“…Multivariate statistical analysis of the data integrated with the network analysis indicates that metabolites related to energy deficit, abnormal concentrations of neurotoxic metabolites and metabolites related to neurotransmitter production are pathognomonic of ALS in the advanced stage. …”
Publicado 2022
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1669por Trisha, Anuva Talukder, Shakil, Mynul Hasan, Talukdar, Suvro, Rovina, Kobun, Huda, Nurul, Zzaman, Wahidu“…However, sufficient information was not found to support that green tea consumption reduces the risk of lung cancer, esophageal cancer, or stomach cancer. The exciting data integrated into this article will increase interest in future researchers to garner more fruitful information on the relevant topics.…”
Publicado 2022
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1670por Pennitz, Peter, Kirsten, Holger, Friedrich, Vincent D., Wyler, Emanuel, Goekeri, Cengiz, Obermayer, Benedikt, Heinz, Gitta A., Mashreghi, Mir-Farzin, Büttner, Maren, Trimpert, Jakob, Landthaler, Markus, Suttorp, Norbert, Hocke, Andreas C., Hippenstiel, Stefan, Tönnies, Mario, Scholz, Markus, Kuebler, Wolfgang M., Witzenrath, Martin, Hoenzke, Katja, Nouailles, Geraldine“…Specifically, we demonstrated a workflow for interspecies data integration, applied a single unified gene nomenclature, performed cell-specific clustering and identified marker genes for each species. …”
Publicado 2022
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1671por Ochoa, David, Hercules, Andrew, Carmona, Miguel, Suveges, Daniel, Baker, Jarrod, Malangone, Cinzia, Lopez, Irene, Miranda, Alfredo, Cruz-Castillo, Carlos, Fumis, Luca, Bernal-Llinares, Manuel, Tsukanov, Kirill, Cornu, Helena, Tsirigos, Konstantinos, Razuvayevskaya, Olesya, Buniello, Annalisa, Schwartzentruber, Jeremy, Karim, Mohd, Ariano, Bruno, Martinez Osorio, Ricardo Esteban, Ferrer, Javier, Ge, Xiangyu, Machlitt-Northen, Sandra, Gonzalez-Uriarte, Asier, Saha, Shyamasree, Tirunagari, Santosh, Mehta, Chintan, Roldán-Romero, Juan María, Horswell, Stuart, Young, Sarah, Ghoussaini, Maya, Hulcoop, David G, Dunham, Ian, McDonagh, Ellen M“…Since our last update, we have reimagined, redesigned, and rebuilt the Platform in order to streamline data integration and harmonisation, expand the ways in which users can explore the data, and improve the user experience. …”
Publicado 2022
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1672por Hollier, John M, Strickland, Tiantá A, Fordis, C Michael, van Tilburg, Miranda AL, Shulman, Robert J, Thompson, Debbe“…Using a hybrid thematic analysis approach, 2 independent coders coded the interview transcripts using a shared codebook. Data integration occurred after the qualitative and quantitative data were analyzed, and the collective results were summarized. …”
Publicado 2023
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1673“…INTEND’s data-driven approach makes it a valuable multi-omic data integration tool. The code for INTEND is available at https://github.com/Shamir-Lab/INTEND.…”
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1674por Tamborini, Marcilene Marques de Freitas, Centenaro, Alexa Pupiara Flores Coelho, Souto, Eliane Nogueira de Souza, Andres, Alana Thais Gisch, Stumm, Eniva Miladi Fernandes, Colet, Christiane de Fátima“…Professionals with more than sixteen years of experience had better conditions to deal with stressful factors, compared to those with less than five years (p<0.03). Data integration showed implications of the pandemic in life, work, and interfaces with psychological symptoms. …”
Publicado 2023
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1675“…Multidimensional genomic data integration enables the full exploration of the data and provides novel perspectives for screening, identification and characterization of the function and regulatory mechanisms of unknown enhancers. …”
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1676por Fernandez-Ricaud, Luciano, Warringer, Jonas, Ericson, Elke, Glaab, Kerstin, Davidsson, Pär, Nilsson, Fabian, Kemp, Graham J. L., Nerman, Olle, Blomberg, Anders“…Phenomics—the large-scale quantitative phenotypic analysis of genotypes on a genome-wide scale—connects automated data generation with the development of novel tools for phenotype data integration, mining and visualization. Our yeast phenomics database PROPHECY is available at . …”
Publicado 2007
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1677“…The study was performed using cell lines in equilibrium in order to reduce a major potential source of biological variation, thus allowing the analysis to focus on the data integration methods in order to establish their performance. …”
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1678por Plata, Germán, Hsiao, Tzu-Lin, Olszewski, Kellen L, Llinás, Manuel, Vitkup, Dennis“…Genome-scale metabolic reconstructions can serve as important tools for hypothesis generation and high-throughput data integration. Here, we present a metabolic network reconstruction and flux-balance analysis (FBA) of Plasmodium falciparum, the primary agent of malaria. …”
Publicado 2010
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1679por Pop, Ana, Huttenhower, Curtis, Iyer-Pascuzzi, Anjali, Benfey, Philip N, Troyanskaya, Olga G“…RESULTS: Here, we provide a compendium of functional relationship networks for Arabidopsis thaliana leveraging data integration based on over 60 microarray, physical and genetic interaction, and literature curation datasets. …”
Publicado 2010
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1680por Deng, Xutao“…RESULTS: SeqGene, a new data mining tool, supports mutation detection and annotation, dbSNP and 1000 Genome data integration, RNA-Seq expression quantification, mutation and coverage visualization, allele specific expression (ASE), differentially expressed genes (DEGs) identification, copy number variation (CNV) analysis, and gene expression quantitative trait loci (eQTLs) detection. …”
Publicado 2011
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