“…The assembly methods used for whole-genome shotgun (WGS) data have a major impact on the quality of resulting draft genomes. We present a novel algorithm to generate a set of “reliable” overlaps based on identifying repeat k-mers. …”
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“…The document was modified in response to oral and written comments, and a revised draft was posted in 2010 and again modified in response to written comments. …”
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“…Recently, draft sequences of two extinct hominin genomes, a Neanderthal and Denisovan, have been released. …”
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“…In this study, two high-quality draft genomes were generated from Anoxybacillus spp. …”
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“…Many of these core proteins are also found in the draft genomes (although which chromosome they are located on is unknown.) …”
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“…The draft scale was pilot-tested with a convenience sample of 30 women during their treatment. …”
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“…RESULTS: We assembled a 54.9Mb P. lycopersici draft genome sequence based on Illumina short reads, and annotated approximately 17,000 genes. …”
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“…Pilon significantly improves draft genome assemblies by correcting bases, fixing mis-assemblies and filling gaps. …”
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“…Here we use next-generation sequencing to produce a draft genome and transcriptome of T. canis to support future biological and biotechnological investigations. …”
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“…These steps were done to develop a conceptual framework: planning for a steering committee, forming a working committee, re-viewing community assessment models and projects, preparing the proposed model draft, in-depth interview and focused group discussions with national experts, finalizing the draft, and preparing the final model. …”
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“…The draft genomes of the 12 HS strains were between 2,298,035 and 2,410,300 bp in length. …”
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“…RESULTS: Twelve draft learning objectives were developed based on review of relevant literature. …”
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“…The sdn genes previously published as the putative nitrogenase of S. thermoautotrophicus have little similarity to anything found in draft genome sequences, published here, for strains H1 and UBT1, but share >99% nucleotide identity with genes from Hydrogenibacillus schlegelii, a draft genome for which is also presented here. …”
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“…We present the complete genome sequence for the M. phlei CCUG21000(T) type strain and the draft genomes for four additional strains. The genome size for all fiveis 5.3 Mb with 69.4% Guanine-Cytosine content. …”
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“…The software uses contigs obtained in the assembly of the genome to perform an alignment against a draft of the genome/scaffold, using BLAST or Mummer to close gaps. …”
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“…This sequence-based genetic map provides a powerful tool for the assembly of a low-cost draft genome of safflower, and the same general approach is expected to work for other species.…”
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“…BACKGROUND: A preexisting rotator cuff tear may affect the draft status and career performance of National Football League (NFL) players. …”
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“…Predicted mRNAs identified by screening the published D. citri annotated draft genome were manually searched using a custom database of immune genes from previously annotated insect genomes. …”
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“…Downy mildew pathogens affect several economically important crops worldwide but, due to their obligate nature, few genetic resources are available for genomic and population analyses. Draft genomes for emergent downy mildew pathogens such as the oomycete Pseudoperonospora cubensis, causal agent of cucurbit downy mildew, have been published and can be used to perform comparative genomic analysis and develop tools such as microsatellites to characterize pathogen population structure. …”
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“…Conclusions: We present an annotated draft genome of the Antarctic midge, P. steinenii. …”
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