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11961por He, Shaomei, Stevens, Sarah L. R., Chan, Leong-Keat, Bertilsson, Stefan, Glavina del Rio, Tijana, Tringe, Susannah G., Malmstrom, Rex R., McMahon, Katherine D.“…In this study, we recovered 19 Verrucomicrobia draft genomes by sequencing 184 time-series metagenomes from a eutrophic lake and a humic bog that differ in carbon source and nutrient availabilities. …”
Publicado 2017
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11962por Andermann, Tessa, Tamburini, Fiona B, Tkachenko, Ekaterina, Senchyna, Fiona, Banaei, Niaz, Bhatt, Ami“…We identified 15 patients from whom we had 17 bacteremia isolates, and performed NGS (Illumina HiSeq 4000) on stool and isolate DNA. We generated draft assemblies of isolate genomes using the SPAdes assembler, and aligned stool metagenomic reads to the draft isolate genomes using Bowtie2, filtering reads for perfect end-to-end alignment. …”
Publicado 2017
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11963por Blighe, K., DeDionisio, L., Christie, K. A., Chawes, B., Shareef, S., Kakouli-Duarte, T., Chao-Shern, C., Harding, V., Kelly, R. S., Castellano, L., Stebbing, J., Lasky-Su, J. A., Nesbit, M. A., Moore, C. B. T.“…The reporting of the first draft of the human genome in 2000 brought with it much hope for the future in what was felt as a paradigm shift toward improved health outcomes. …”
Publicado 2018
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11964por Lavelle, Candice, Smith, Ley Cody, Bisesi, Joseph H., Yu, Fahong, Silva-Sanchez, Cecilia, Moraga-Amador, David, Buerger, Amanda N., Garcia-Reyero, Natàlia, Sabo-Attwood, Tara, Denslow, Nancy D.“…To do so, we generated a draft transcriptome using short and long sequencing reads from liver, testis, brain, heart, gill, head kidney, trunk kidney, and gastrointestinal tract. …”
Publicado 2018
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11965por Timmers, Peer H. A., Vavourakis, Charlotte D., Kleerebezem, Robbert, Damsté, Jaap S. Sinninghe, Muyzer, Gerard, Stams, Alfons J. M., Sorokin, Dimity Y., Plugge, Caroline M.“…Metagenomic analysis of the M-SAO cultures showed that the dominant SAOB was ‘Candidatus Syntrophonatronum acetioxidans,’ and a near-complete draft genome of this SAOB was reconstructed. ‘Ca. …”
Publicado 2018
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11966por Li, Shu-Fen, Guo, Yu-Jiao, Li, Jia-Rong, Zhang, Dong-Xu, Wang, Bing-Xiao, Li, Ning, Deng, Chuan-Liang, Gao, Wu-Jun“…RESULTS: We extensively analyzed the repetitive components of draft spinach genome, especially TEs and satellites, by different strategies. …”
Publicado 2019
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11967“…We provide a set of candidate SNPs for species identification of four of the Cedrela species included in this analysis, and present draft chloroplast genomes for multiple individuals of eight species from four genera in the Meliaceae. …”
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11968por Lüli, Yunjiao, Cai, Qing, Chen, Zuo H., Sun, Hu, Zhu, Xue-Tai, Li, Xuan, Yang, Zhu L., Luo, Hong“…A fatal mushroom poisoning case in China has led to acquisition of fresh L. venenata fruiting bodies, based on which a draft genome was obtained through PacBio and Illumina sequencing platforms. …”
Publicado 2019
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11969por Cui, Jinming, Mai, Guoqin, Wang, Zuowei, Liu, Quan, Zhou, Yan, Ma, Yingfei, Liu, Chenli“…CONCLUSION: The analysis of the key genes involved in cellulose degradation and reconstruction of the microbial draft genomes by binning the assembled contigs predicted a mutualistic interaction based on public goods regarding the cellulolytic process in the niche, suggesting that in the studied microbial consortium, free-living bacteria likely survive on each other by acquisition and exchange of metabolites. …”
Publicado 2019
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11970por van den Berg, Leonard H., Sorenson, Eric, Gronseth, Gary, Macklin, Eric A., Andrews, Jinsy, Baloh, Robert H., Benatar, Michael, Berry, James D., Chio, Adriano, Corcia, Philippe, Genge, Angela, Gubitz, Amelie K., Lomen-Hoerth, Catherine, McDermott, Christopher J., Pioro, Erik P., Rosenfeld, Jeffrey, Silani, Vincenzo, Turner, Martin R., Weber, Markus, Brooks, Benjamin Rix, Miller, Robert G., Mitsumoto, Hiroshi“…Statistical experts drafted a separate document of statistical considerations (section 9). …”
Publicado 2019
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11971por Muramatsu, Taeko, Nakamura, Mieko, Okada, Eisaku, Katayama, Harumi, Ojima, Toshiyuki“…Five-hundred and twenty-eight nursing students responded to the final draft questionnaire. Participants’ mean age was 20.4 (standard deviation = 3.1) years. …”
Publicado 2019
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11972“…The final, refined prototype measure (QoLC&I, draft 3) was subjected to psychometric evaluation. …”
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11973por Just-Østergaard, Emilie, Flensborg-Madsen, Trine, Knop, Joachim, Sørensen, Holger Jelling, Becker, Ulrik, Mortensen, Erik Lykke“…DESIGN: Prospective cohort study based on a linkage of intelligence test scores from draft board examinations and register data on AUD diagnoses during 36 years of follow-up. …”
Publicado 2019
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11974por Sarda, Sujata P., De La Cruz, Marie, Flood, Emuella M., Vanya, Magdalena, Hwang, David G., Ta, Christopher N., Narvekar, Abhijit“…We aimed to develop content-valid patient- (PRO) and observer-reported outcome (ObsRO) instruments to assess symptoms of ocular discomfort associated with viral or bacterial conjunctivitis in adult and pediatric patients. METHODS: Draft items were developed from a previous review of published studies from 2001 to 2015. …”
Publicado 2019
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11975“…The road to professional baseball illustrates the complexity, variability and non-linearity of athlete development, as players may be drafted from various high school, 2 year, or 4 year programs and then placed into extensive minor league systems. …”
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11976por Shi, Min, Wang, Zhizhi, Ye, Xiqian, Xie, Hongqing, Li, Fei, Hu, Xiaoxiao, Wang, Zehua, Yin, Chuanlin, Zhou, Yuenan, Gu, Qijuan, Zou, Jiani, Zhan, Leqing, Yao, Yuan, Yang, Jian, Wei, Shujun, Hu, Rongmin, Guo, Dianhao, Zhu, Jiangyan, Wang, Yanping, Huang, Jianhua, Pennacchio, Francesco, Strand, Michael R., Chen, Xuexin“…Genome assembly using SOAPdenovo produced a 178 Mb draft genome for C. vestalis and a 399 Mb draft genome for D. collaris. …”
Publicado 2019
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11977por Waterhouse, Robert M., Aganezov, Sergey, Anselmetti, Yoann, Lee, Jiyoung, Ruzzante, Livio, Reijnders, Maarten J. M. F., Feron, Romain, Bérard, Sèverine, George, Phillip, Hahn, Matthew W., Howell, Paul I., Kamali, Maryam, Koren, Sergey, Lawson, Daniel, Maslen, Gareth, Peery, Ashley, Phillippy, Adam M., Sharakhova, Maria V., Tannier, Eric, Unger, Maria F., Zhang, Simo V., Alekseyev, Max A., Besansky, Nora J., Chauve, Cedric, Emrich, Scott J., Sharakhov, Igor V.“…Updating multi-scaffold drafts to chromosome-level status can be achieved through experimental mapping or re-sequencing efforts. …”
Publicado 2020
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11978por Milat, Andrew, Lee, Karen, Conte, Kathleen, Grunseit, Anne, Wolfenden, Luke, van Nassau, Femke, Orr, Neil, Sreeram, Padmaja, Bauman, Adrian“…METHODS: The ISAT was developed over three stages; the first stage involved a literature review to identify similar tools and frameworks that could be used to guide scalability assessments, and expert input to develop draft ISAT content. In the second stage, the draft ISAT tool was tested with end users. …”
Publicado 2020
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11979por Petkovic, Jennifer, Riddle, Alison, Akl, Elie A., Khabsa, Joanne, Lytvyn, Lyubov, Atwere, Pearl, Campbell, Pauline, Chalkidou, Kalipso, Chang, Stephanie M., Crowe, Sally, Dans, Leonila, Jardali, Fadi El, Ghersi, Davina, Graham, Ian D., Grant, Sean, Greer-Smith, Regina, Guise, Jeanne-Marie, Hazlewood, Glen, Jull, Janet, Katikireddi, S. Vittal, Langlois, Etienne V., Lyddiatt, Anne, Maxwell, Lara, Morley, Richard, Mustafa, Reem A., Nonino, Francesco, Pardo, Jordi Pardo, Pollock, Alex, Pottie, Kevin, Riva, John, Schünemann, Holger, Simeon, Rosiane, Smith, Maureen, Stein, Airton T., Synnot, Anneliese, Tufte, Janice, White, Howard, Welch, Vivian, Concannon, Thomas W., Tugwell, Peter“…We will use the results of the systematic reviews to develop a candidate list of draft guidance recommendations and will seek broad feedback on the draft guidance via an online survey of guideline developers and external stakeholders. …”
Publicado 2020
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11980“…While CRISPRi and CRISPRa have tremendous potential to systematically investigate gene function in bacteria, few programs are specifically tailored to identify guides in draft bacterial genomes genomewide. Furthermore, few programs offer open-source code with flexible design parameters for bacterial targeting. …”
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