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12661por Burbano, Hernán A., Green, Richard E., Maricic, Tomislav, Lalueza-Fox, Carles, de la Rasilla, Marco, Rosas, Antonio, Kelso, Janet, Pollard, Katherine S., Lachmann, Michael, Pääbo, Svante“…Combining these new data with shotgun sequence from the Neandertal and Denisova draft genomes, we determine at least one archaic hominin allele for 84% of all positions within HARs. …”
Publicado 2012
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12662por Urasaki, Naoya, Tarora, Kazuhiko, Shudo, Ayano, Ueno, Hiroki, Tamaki, Moritoshi, Miyagi, Norimichi, Adaniya, Shinichi, Matsumura, Hideo“…The primitive sex chromosomes genetically determine the sex of the papaya. Although draft sequences of the papaya genome are already available, the genes for sex determination have not been identified, likely due to the complicated structure of its sex-chromosome sequences. …”
Publicado 2012
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12663“…At present, PGDD contains data for 26 plants including bryophytes and chlorophyta, as well as angiosperms with draft genome sequences. In addition to the inclusion of new genomes as they become available, we are preparing new functions to enhance PGDD.…”
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12664por Zheng, Aiping, Lin, Runmao, Zhang, Danhua, Qin, Peigang, Xu, Lizhi, Ai, Peng, Ding, Lei, Wang, Yanran, Chen, Yao, Liu, Yao, Sun, Zhigang, Feng, Haitao, Liang, Xiaoxing, Fu, Rongtao, Tang, Changqing, Li, Qiao, Zhang, Jing, Xie, Zelin, Deng, Qiming, Li, Shuangcheng, Wang, Shiquan, Zhu, Jun, Wang, Lingxia, Liu, Huainian, Li, Ping“…Rhizoctonia solani is a major fungal pathogen of rice (Oryza sativa L.) that causes great yield losses in all rice-growing regions of the world. Here we report the draft genome sequence of the rice sheath blight disease pathogen, R. solani AG1 IA, assembled using next-generation Illumina Genome Analyser sequencing technologies. …”
Publicado 2013
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12665“…In the light of recently released Musa genome draft sequence, the molecular breeders may have interest in developing molecular markers for drought resistance.…”
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12666por Di Stefano, Marco, Rosa, Angelo, Belcastro, Vincenzo, di Bernardo, Diego, Micheletti, Cristian“…The findings indicate that gene coregulation and colocalization are largely compatible and that this relationship can be exploited to draft the overall spatial organization of the chromosome in vivo. …”
Publicado 2013
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12667“…CGAP implemented four web servers including creating complete and regional genome maps of high quality, comparing genome features, constructing phylogenetic trees using complete genome sequences, and annotating draft chloroplast genomes submitted by users. CONCLUSIONS: Both CGAP and source code are available at http://www.herbbol.org:8000/chloroplast. …”
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12668“…In the first step, through literature review, the draft and basic fields of main tasks were defined. …”
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12669por Beheshtian, M, Olyaee Manesh, A, Bonakdar, SH, Malek Afzali, H, Larijani, B, Hosseini, L, Zakeri, M, Dastgerdi, M Vahid“…This study is carried out through a main workshop and expert panels and final consensus on selected indicators. The first draft of indicators and inequity stratifying variables were prepared and then revised by working groups consisting of experts inside and outside Health system. …”
Publicado 2013
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12670por Leushkin, Evgeny V, Sutormin, Roman A, Nabieva, Elena R, Penin, Aleksey A, Kondrashov, Alexey S, Logacheva, Maria D“…RESULTS: Here we report sequencing and de novo draft assembly of G. aurea genome. The assembly consists of 10,687 contigs of the total length of 43.4 Mb and includes 17,755 complete and partial protein-coding genes. …”
Publicado 2013
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12671“…Recently our group published draft genome of strain SJ98. In this study, we further sequence and annotate the genome of stain SJ98 to exploit the potential of this bacterium. …”
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12672por Stackebrandt, Erko, Chertkov, Olga, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Goodwin, Lynne A., Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Huntemann, Marcel, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Pan, Chongle, Rohde, Manfred, Gronow, Sabine, Göker, Markus, Detter, John C., Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter“…This is the first complete genome sequence of a member of the genus Turneriella and the 13(th) member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.…”
Publicado 2013
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12673por Croucher, Nicholas J., Mitchell, Andrea M., Gould, Katherine A., Inverarity, Donald, Barquist, Lars, Feltwell, Theresa, Fookes, Maria C., Harris, Simon R., Dordel, Janina, Salter, Susannah J., Browall, Sarah, Zemlickova, Helena, Parkhill, Julian, Normark, Staffan, Henriques-Normark, Birgitta, Hinds, Jason, Mitchell, Tim J., Bentley, Stephen D.“…Phylogenetic analysis of a complete reference genome and 81 draft sequences from clonal complex 180, the predominant serotype 3 clone in much of the world, found most sampled isolates belonged to a clade affected by few diversifying recombinations. …”
Publicado 2013
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12674por Wolever, Ruth Q.“…From my perspective as a health psychologist, understanding the origins of the problems will help us draft the solution. But from my perspective as a coach, how we got here is much less important than how we get out of here.…”
Publicado 2013
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12675“…This is the first report of targeted capture array technology in an avian species, the chicken, an important vertebrate model; the work highlights the utility of employing advanced technologies in an organism with only a “draft stage” reference genome sequence.…”
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12676por Zhou, Dan, Zhang, Donghui, Ding, Guohui, Shi, Linna, Hou, Qing, Ye, Yuting, Xu, Yang, Zhou, Huayun, Xiong, Chunrong, Li, Shengdi, Yu, Jing, Hong, Shanchao, Yu, Xinyou, Zou, Ping, Chen, Chen, Chang, Xuelian, Wang, Weijie, Lv, Yuan, Sun, Yan, Ma, Lei, Shen, Bo, Zhu, Changliang“…RESULTS: We performed 454 next-generation sequencing and obtained a draft sequence of A. sinensis assembled into scaffolds spanning 220.8 million base pairs. …”
Publicado 2014
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12677por Riedel, Thomas, Teshima, Hazuki, Petersen, Jörn, Fiebig, Anne, Davenport, Karen, Daligault, Hajnalka, Erkkila, Tracy, Gu, Wei, Munk, Christine, Xu, Yan, Chen, Amy, Pati, Amrita, Ivanova, Natalia, Goodwin, Lynne A., Chain, Patrick, Detter, John C., Rohde, Manfred, Gronow, Sabine, Kyrpides, Nikos C., Woyke, Tanja, Göker, Markus, Brinkhoff, Thorsten, Klenk, Hans-Peter“…Here we describe the features of L. aquimarina DSM 24565(T) together with the permanent-draft genome sequence and annotation. The 5,344,253 bp long genome consists of one chromosome and an unusually high number of seven extrachromosomal elements and contains 5,129 protein-coding and 89 RNA genes. …”
Publicado 2013
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12678por Freese, Heike M., Dalingault, Hajnalka, Petersen, Jörn, Pradella, Silke, Davenport, Karen, Teshima, Hazuki, Chen, Amy, Pati, Amrita, Ivanova, Natalia, Goodwin, Lynne A., Chain, Patrick, Detter, John C., Rohde, Manfred, Gronow, Sabine, Kyrpides, Nikos C., Woyke, Tanja, Brinkhoff, Thorsten, Göker, Markus, Overmann, Jörg, Klenk, Hans-Peter“…Here, we describe the features of this organism including the annotated high-quality draft genome sequence and highlight some particular traits. …”
Publicado 2013
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12679por Sergeant, Martin J., Constantinidou, Chrystala, Cogan, Tristan A., Bedford, Michael R., Penn, Charles W., Pallen, Mark J.“…These were binned into over two-dozen draft genomes, which included Campylobacter jejuni and Helicobacter pullorum. …”
Publicado 2014
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12680por Roy, Rajat S., Price, Dana C., Schliep, Alexander, Cai, Guohong, Korobeynikov, Anton, Yoon, Hwan Su, Yang, Eun Chan, Bhattacharya, Debashish“…Here we tested the efficacy of SCG to generate a draft genome assembly from a single sample, in this case a cell belonging to the broadly distributed MAST-4 uncultured marine stramenopiles. …”
Publicado 2014
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