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13241por Park, Seon-Cheol, Oh, Hong Seok, Oh, Dong-Hoon, Jung, Seung Ah, Na, Kyoung-Sae, Lee, Hwa-Young, Kang, Ree-Hun, Choi, Yun-Kyeung, Lee, Min-Soo, Park, Yong Chon“…The guideline development process consisted of establishing several key questions related to non-pharmacologic treatments of depression, searching the literature for studies which answer these questions, assessing the evidence level of each selected study, drawing up draft recommendation, and peer review. The Scottish Intercollegiate Guidelines Network grading system was used to evaluate the quality of evidence. …”
Publicado 2014
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13242por Reddy, Umesh K., Almeida, Aldo, Abburi, Venkata L., Alaparthi, Suresh Babu, Unselt, Desiree, Hankins, Gerald, Park, Minkyu, Choi, Doil, Nimmakayala, Padma“…The genes Pun1, CCR, KAS and HCT were sequenced and matched with the whole-genome sequence draft of pepper to identify SNP locations and for further characterization. …”
Publicado 2014
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13243por Lorente-Galdos, Belen, Bleyhl, Jonathan, Santpere, Gabriel, Vives, Laura, Ramírez, Oscar, Hernandez, Jessica, Anglada, Roger, Cooper, Gregory M, Navarro, Arcadi, Eichler, Evan E, Marques-Bonet, Tomas“…Genes within segmental duplications are overlooked in most studies of selection due to the limitations of draft nonhuman genome assemblies and to the methodological reliance on accurate gene trees, which are difficult to obtain for duplicated genes. …”
Publicado 2013
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13244por Dogs, Marco, Teshima, Hazuki, Petersen, Jörn, Fiebig, Anne, Chertkov, Olga, Dalingault, Hajnalka, Chen, Amy, Pati, Amrita, Goodwin, Lynne A., Chain, Patrick, Detter, John C., Ivanova, Natalia, Lapidus, Alla, Rohde, Manfred, Gronow, Sabine, Kyrpides, Nikos C., Woyke, Tanja, Simon, Meinhard, Göker, Markus, Klenk, Hans-Peter, Brinkhoff, Thorsten“…TF-218(T) is the type strain of the species Phaeobacter daeponensis Yoon et al. 2007, a facultatively anaerobic Phaeobacter species isolated from tidal flats. Here we describe the draft genome sequence and annotation of this bacterium together with previously unreported aspects of its phenotype. …”
Publicado 2013
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13245Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variationspor Ercolano, Maria Raffaella, Sacco, Adriana, Ferriello, Francesca, D’Alessandro, Raffaella, Tononi, Paola, Traini, Alessandra, Barone, Amalia, Zago, Elisa, Chiusano, Maria Luisa, Buson, Genny, Delledonne, Massimo, Frusciante, Luigi“…RESULTS: Here, we present the draft genome sequences of tomato Vesuviano and San Marzano genome. …”
Publicado 2014
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13246por Paungfoo-Lonhienne, Chanyarat, Lonhienne, Thierry G A, Yeoh, Yun Kit, Webb, Richard I, Lakshmanan, Prakash, Chan, Cheong Xin, Lim, Phaik-Eem, Ragan, Mark A, Schmidt, Susanne, Hugenholtz, Philip“…One isolate readily colonized roots, fixed N(2) and stimulated growth of plantlets, and was classified as a new species, Burkholderia australis sp. nov. Draft genome sequencing of the isolate confirmed the presence of nitrogen fixation. …”
Publicado 2014
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13247por Auchincloss, Lisa Corwin, Laursen, Sandra L., Branchaw, Janet L., Eagan, Kevin, Graham, Mark, Hanauer, David I., Lawrie, Gwendolyn, McLinn, Colleen M., Pelaez, Nancy, Rowland, Susan, Towns, Marcy, Trautmann, Nancy M., Varma-Nelson, Pratibha, Weston, Timothy J., Dolan, Erin L.“…Thus, we assembled a small working group of people with expertise in CURE instruction and assessment to: 1) draft an operational definition of a CURE, with the aim of defining what makes a laboratory course or project a “research experience”; 2) summarize research on CUREs, as well as findings from studies of undergraduate research internships that would be useful for thinking about how students are influenced by participating in CUREs; and 3) identify areas of greatest need with respect to CURE assessment, and directions for future research on and evaluation of CUREs. …”
Publicado 2014
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13248por Ishida, Kasumi, Sekizuka, Tsuyoshi, Hayashida, Kyoko, Matsuo, Junji, Takeuchi, Fumihiko, Kuroda, Makoto, Nakamura, Shinji, Yamazaki, Tomohiro, Yoshida, Mitsutaka, Takahashi, Kaori, Nagai, Hiroki, Sugimoto, Chihiro, Yamaguchi, Hiroyuki“…In this study, we found that the host amoeba could completely evade Legionella infection. The draft genome sequence of Neochlamydia S13 revealed several defects in essential metabolic pathways, as well as unique molecules with leucine-rich repeats (LRRs) and ankyrin domains, responsible for protein-protein interaction. …”
Publicado 2014
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13249por Olalde, Iñigo, Sánchez-Quinto, Federico, Datta, Debayan, Marigorta, Urko M., Chiang, Charleston W. K., Rodríguez, Juan Antonio, Fernández-Callejo, Marcos, González, Irene, Montfort, Magda, Matas-Lalueza, Laura, Civit, Sergi, Luiselli, Donata, Charlier, Philippe, Pettener, Davide, Ramírez, Oscar, Navarro, Arcadi, Himmelbauer, Heinz, Marquès-Bonet, Tomàs, Lalueza-Fox, Carles“…In addition, the eye colour prediction supported brown eyes, while Louis XVI had blue eyes. This is the first draft genome generated from a person who lived in a recent historical period; however, our results suggest that this sample may not correspond to the alleged king.…”
Publicado 2014
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13250“…The whole genome sequence of this protist has revealed new insights into the ancestral genome composition of Metazoa, in particular with regard to gene families involved in the evolution of multicellularity. The draft genome revealed the presence of 23 families of transposable element, made up from DNA transposon as well as long terminal repeat (LTR) and non-LTR retrotransposon families. …”
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13251por Shin, Dong-Seong, Park, Sukh-Que, Kang, Hyun-Seung, Yoon, Seok-Mann, Cho, Jae-Hoon, Lim, Dong-Jun, Baik, Min-Woo, Kwon, O Ki, Kim, Bum-Tae“…After 2 years, a rough draft of the ENS training and certification regulations were prepared, and the standard training program title was decided. …”
Publicado 2014
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13252por Evans, Ruth EC, Morris, Melanie, Sekhon, Mandeep, Buszewicz, Marta, Walter, Fiona M, Waller, Jo, Simon, Alice E“…METHOD: An invitation was emailed to GPs via practice managers and included a weblink to a draft education leaflet and an online survey about the impact of sending a leaflet giving information about symptoms associated with gynaecological cancers to all women on GPs’ lists. …”
Publicado 2014
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13253por Watanabe, Masahiro, Inoue, Hiroyuki, Inoue, Benchaporn, Yoshimi, Miho, Fujii, Tatsuya, Ishikawa, Kazuhiko“…The xylanases of A. cellulolyticus play an important role in cellulolytic biomass degradation. Search of a draft genome sequence of A. cellulolyticus for xylanase coding regions identified seven ORFs showing homology to GH 11 xylanase genes (xylA, xylB, xylC, xylD, xylE, xylF and xylG). …”
Publicado 2014
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13254por Cai, Qingle, Qian, Xiaoju, Lang, Yongshan, Luo, Yadan, Xu, Jiaohui, Pan, Shengkai, Hui, Yuanyuan, Gou, Caiyun, Cai, Yue, Hao, Meirong, Zhao, Jinyang, Wang, Songbo, Wang, Zhaobao, Zhang, Xinming, He, Rongjun, Liu, Jinchao, Luo, Longhai, Li, Yingrui, Wang, Jun“…RESULTS: Using next generation sequencing technology, we generated and assembled a draft genome sequence of the ground tit. The assembly contained 1.04 Gb of sequence that covered 95.4% of the whole genome and had higher N50 values, at the level of both scaffolds and contigs, than other sequenced avian genomes. …”
Publicado 2013
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13255por Koren, Sergey, Harhay, Gregory P, Smith, Timothy PL, Bono, James L, Harhay, Dayna M, Mcvey, Scott D, Radune, Diana, Bergman, Nicholas H, Phillippy, Adam M“…Therefore, most genomes have been left unfinished due to the significant resources required to manually close gaps in draft assemblies. Third-generation, single-molecule sequencing addresses this problem by greatly increasing sequencing read length, which simplifies the assembly problem. …”
Publicado 2013
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13256por Kopf, Matthias, Klähn, Stephan, Pade, Nadin, Weingärtner, Christian, Hagemann, Martin, Voß, Björn, Hess, Wolfgang R.“…To enable a comparative approach, we generated the draft genome sequence of Synechocystis sp. PCC 6714, a closely related strain of 6803 (16S rDNA identity 99.4%) that also is amenable to genetic manipulation. …”
Publicado 2014
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13257por Afonso-Grunz, Fabian, Molina, Carlos, Hoffmeier, Klaus, Rycak, Lukas, Kudapa, Himabindu, Varshney, Rajeev K., Drevon, Jean-Jacques, Winter, Peter, Kahl, Günter“…Here, we reannotated our previously published transcriptome data generated by deepSuperSAGE (Serial Analysis of Gene Expression) to the recently published draft genome of chickpea to assess the root- and nodule-specific transcriptomes of the eukaryotic host cells. …”
Publicado 2014
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13258por Young, Neil D., Nagarajan, Niranjan, Lin, Suling Joyce, Korhonen, Pasi K., Jex, Aaron R., Hall, Ross S., Safavi-Hemami, Helena, Kaewkong, Worasak, Bertrand, Denis, Gao, Song, Seet, Qihui, Wongkham, Sopit, Teh, Bin Tean, Wongkham, Chaisiri, Intapan, Pewpan Maleewong, Maleewong, Wanchai, Yang, Xinhua, Hu, Min, Wang, Zuo, Hofmann, Andreas, Sternberg, Paul W., Tan, Patrick, Wang, Jun, Gasser, Robin B.“…Here we characterize the draft genome (634.5 Mb) and transcriptomes of O. viverrini, elucidate how this fluke survives in the hostile environment within the bile duct and show that metabolic pathways in the parasite are highly adapted to a lipid-rich diet from bile and/or cholangiocytes. …”
Publicado 2014
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13259por Illakkiam, Devaraj, Shankar, Manoharan, Ponraj, Paramasivan, Rajendhran, Jeyaprakash, Gunasekaran, Paramasamy“…Reference genome assembly using MIRA 3.4.0 yielded 198 contigs. The draft genome of PGPR2 encoded 6803 open reading frames, of which 5314 were genes with predicted functions, 1489 were genes of known functions, and 80 were RNA-coding genes. …”
Publicado 2014
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13260por Sheu, Bor-Shyang, Wu, Chun-Ying, Wu, Ming-Shiang, Chiu, Cheng-Tang, Lin, Chun-Che, Hsu, Ping-I, Cheng, Hsiu-Chi, Lee, Teng-Yu, Wang, Hsiu-Po, Lin, Jaw-Town“…The expert group comprised thirty-two Taiwan experts of UGIB to conduct the consensus conference by a modified Delphi process through two separate iterations to modify the draft statements and to vote anonymously to reach consensus with an agreement ≥80% for each statement and to set the recommendation grade. …”
Publicado 2014
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