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2401por Amirbakhtiar, Nazanin, Ismaili, Ahmad, Ghaffari, Mohammad-Reza, Mirdar Mansuri, Raheleh, Sanjari, Sepideh, Shobbar, Zahra-Sadat“…Clustering of the DEGs utilizing Kyoto Encyclopedia of Genes and Genomes (KEGG) indicated that transcripts associated with phenylpropanoid biosynthesis, transporters, transcription factors, hormone signal transduction, glycosyltransferases, exosome, and MAPK signaling might be involved in salt tolerance. …”
Publicado 2021
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2402“…In the present study, public datasets from the Cancer Cell Line Encyclopedia (CCLE), Gene Expression Omnibus (GEO), The Cancer Genome Atlas (TCGA), and cBioPortal were used to address these issues. …”
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2403“…The new model was validated on the well-known cancer genomics resource: CTRP. GeneHancer and Encyclopedia of DNA Elements (ENCODE) database searches indicated that the predicted methylation sites related to EGFR inhibitor sensitivity genes were related to regulatory elements. …”
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2404“…In total, 15,704 compound pairs across KEGG (Kyoto Encyclopedia of Genes and Genomes) and MetaCyc databases were detected. …”
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2405“…When mapping all the impacted metabolites to the biological pathways in the KEGG (Kyoto Encyclopedia of Genes and Genomes) database, we found mineral absorption, ABC transporters, amino acid biosynthesis, metabolic pathways and biosynthesis of plant secondary metabolites were mainly impacted. …”
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2406“…Functional enrichment analysis demonstrated that BN-targeted genes were enriched in 49 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. MIRWALK2.0 database analysis identified 110 enriched KEGG pathways related to osteoporosis. …”
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2407por Wu, Hao, Su, Quan-Xin, Zhang, Zi-Yi, Zhang, Ze, Gao, Sheng-Lin, Lu, Chao, Zuo, Li, Zhang, Li-Feng“…Then, the Database for Annotation, Visualization and Integrated Discovery (DAVID) was used for Gene Ontology (GO) functional analysis, and the Kyoto Encyclopedia of Genes and Genomes (KEGG) was used for pathway enrichment analysis. …”
Publicado 2021
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2408“…The results of the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO) biological process enrichment analysis revealed that the DEGs with upregulation were mainly associated with spliceosome, ribosome, RNA-catabolic process, electron transport chain, etc. …”
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2409“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were applied for the DEGs. …”
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2410por Wang, Shuangqiu, Ma, Jiarui, Zeng, Yanqi, Zhou, Guowei, Wang, Yuxuan, Zhou, Wenjuan, Sun, Xiaohe, Wu, Minghua“…We also constructed a protein–protein interaction network and carried out Gene Ontology and Kyoto Encyclopedia of Genes and Genomes functional enrichment analyses to predict the therapeutic actions of icariin in nervous system diseases including Alzheimer disease, Parkinson disease, ischemic stroke, depressive disorder, multiple sclerosis, glioblastoma, and hereditary spastic paraplegias. …”
Publicado 2021
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2411por Lospinoso, Kristen, Dozmorov, Mikhail, El Fawal, Nadine, Raghu, Rhea, Chae, Wook-Jin, Lee, Eun D.“…However, the down-regulation of these genes in ERAP2N-expressing TCs translates into a propensity for cell death. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that 64 DEGs were significantly enriched in nine pathways, including “Protein processing in endoplasmic reticulum” and “Antigen processing and presentation”, suggesting that the genes may be associated with peptide processes involved in immune recognition during the reproductive cycle.…”
Publicado 2021
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2412por Rong, Guoguang, Zheng, Yuqiao, Chen, Yin, Zhang, Yanjun, Zhu, Peixi, Sawan, MohamadEnlace del recurso
Publicado 2023
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2413por Rody, Hugo V. S., Camargo, Luis E. A., Creste, Silvana, Van Sluys, Marie-Anne, Rieseberg, Loren H., Monteiro-Vitorello, Claudia B.“…Based on sugarcane-Arabidopsis orthology, the modeling used metabolic and protein-protein interaction (PPI) data from Arabidopsis thaliana (from Kyoto Encyclopedia of Genes and Genomes (KEGG) and BioGRID databases) and plant resistance curated knowledge for Viridiplantae obtained through text mining of the UniProt/SwissProt database. …”
Publicado 2021
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2414por Xu, Manlin, Zhang, Xia, Yu, Jing, Guo, Zhiqing, Li, Ying, Song, Xinying, He, Kang, Li, Guowei, Chi, Yucheng“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses revealed that Khib proteins were significantly enriched in many cellular compartments and pathways, such as ribosomes and proteasome subunits. …”
Publicado 2021
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2415“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analysis were used to clarify the functional role in GC. …”
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2416por Qian, Long, Xia, Zhipeng, Zhang, Ming, Han, Qiong, Hu, Die, Qi, Sha, Xing, Danmou, Chen, Yan, Zhao, Xin“…These DEGs were then arranged into a protein-protein interaction (PPI) network, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO) term enrichment analyses were performed to explore the functional roles of these genes. …”
Publicado 2021
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2417por Wang, Xiaolong, Li, Chen, Chen, Tong, Li, Wenhao, Zhang, Hanwen, Zhang, Dong, Liu, Ying, Han, Dianwen, Li, Yaming, Li, Zheng, Luo, Dan, Zhang, Ning, Yang, Qifeng“…The differentially expressed genes (DEGs) were estimated by Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. A risk score formula involving five novel prognostic associated biomarkers (EDN2, CLEC3B, SV2C, WT1, and MUC2) were then constructed by LASSO. …”
Publicado 2021
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2418“…In this study, p22 interacting proteins of the host were identified by a high-throughput method and analyzed by Gene ontology terms and Kyoto Encyclopedia of Gene and Genomes (KEGG) pathways; numerous cellular proteins in 293-T that interacted with p22 protein were identified. …”
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2419“…The Gene Ontology (GO) biological process and Kyoto Encyclopedia of Genes and Genes (KEGG) pathway enrichment analysis were analyzed through the biological information annotation database (DAVID). …”
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2420“…SARS-CoV-2 differentially expressed genes (DEGs) were screened out via bioinformatic analysis Gene Expression Omnibus (GEO) datasets GSE147507, followed by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis; then, protein-protein interaction network was constructed. …”
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