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5781“…We investigated the co-expressed genes with lncRNAs involved in the prognostic model, as well as Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis was conducted R package clusterProfile. …”
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5782“…Gene Ontology (GO) functional annotation, Protein-Protein Interaction (PPI) network, “Molecular Complex Detection” (MCODE) modules, CytoNCA (cytoscape network centrality analysis) essential genes and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway interrelation analysis were performed. …”
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5783por Lin, Yuxiang, Fu, Fangmeng, Lv, Jinxing, Wang, Mengchi, Li, Yan, Zhang, Jie, Wang, Chuan“…Gene ontology (GO) annotation analysis and Kyoto Encyclopedia of Genes and Genome (KEGG) pathway enrichment analysis was performed by the Database for Annotation, Visualization and Integrated Discovery (David) online tool. …”
Publicado 2020
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5784por Zhao, Liang, Sun, Lifang, Zheng, Xiuli, Liu, Jingfang, Zheng, Rong, Yang, Rui, Wang, Ying“…Differentially expressed genes (DEGs) were analyzed using the Database for Annotation and Visualization and Integrated Discovery bioinformatics resource, and gene ontology enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were conducted. …”
Publicado 2019
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5785“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes pathway (KEGG) enrichment analysis was utilized to explore the biological functions of the identified genes. …”
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5786“…The genes coexpressed with CLIC3 were analyzed by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). CLIC3-related signal transduction pathways in BC were explored with gene set enrichment analysis (GSEA). …”
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5787por Qi, Feng, Wang, Lingxiao, Huang, Peixin, Zhao, Zhiying, Yang, Biwei, Xia, Jinglin“…Based on the identified significant signatures, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes pathway analyses were performed. …”
Publicado 2020
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5788por Yu, Dong-Hu, Huang, Jing-Yu, Liu, Xiao-Ping, Ruan, Xiao-Lan, Chen, Chen, Hu, Wei-Dong, Li, Sheng“…In addition, with the aid of the Database for Annotation, Visualization and Integrated Discovery, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes, pathway enrichment analyses were performed on the genes in the selected module. …”
Publicado 2020
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5789por Zhang, Wenchao, Gao, Lingling, Wang, Caixia, Wang, Shuang, Sun, Di, Li, Xiao, Liu, Miao, Qi, Yue, Liu, Juanjuan, Lin, Bei“…Our study integrated two GEO datasets(i.e.GSE63678, GSE17025) and TCGA(The Cancer Genome Atlas ) UCEC data to screen out 344 common differentially expressed genes(DEGs), which were further analyzed by GO(gene ontology) functions and KEGG(Kyoto Encyclopedia of Gene and Genome) pathways. KEGG analysis results showed these DEGs were mainly enriched in cell cycle, oocyte meiosis, cellular senescence, carbon metabolism and p53 signaling pathway. …”
Publicado 2020
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5790“…The gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were constructed, and protein–protein interaction network of differentially expressed genes (DEGs) was performed by Cytoscape. …”
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5791por Huang, Xuewei, Xu, Yigang, Lin, Qingyu, Guo, Weilong, Zhao, Dongfang, Wang, Chunmei, Wang, Li, Zhou, Han, Jiang, Yanping, Cui, Wen, Qiao, Xinyuan, Li, Yijing, Ma, Guangpeng, Tang, Lijie“…The techniques of gene ontology and Kyoto Encyclopedia of Genes and Genomes pathways were applied. …”
Publicado 2019
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5792por Cui, Xuemei, Wang, Yong, Maqbool, Babar, Yuan, Lijia, He, Shanshan, Zhang, Cenrong, Xu, Wei, Hu, Songhua“…Transcriptome analysis of splenocytes showed that differentially expressed genes (DEGs), immune-related gene ontology (GO) terms, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were significantly enriched in the SO-VE-GS group. …”
Publicado 2019
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5793por Ding, Haisheng, Cheng, Guanglong, Leng, Jianjian, Yang, Yongxin, Zhao, Xiaowei, Wang, Xiaofei, Qi, Yunxia, Huang, Dongwei, Zhao, Huiling“…The function of the differentially expressed miRNAs was explored by comparing them with known mammalian miRNAs and by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis of their predicted targets. …”
Publicado 2020
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5794“…Differentially expressed genes (DEGs), GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment were conducted using R software. …”
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5795por Chen, Zhencong, Li, Ming, Ma, Ke, Shang, Guoguo, Liang, Jiaqi, Yin, Jiacheng, Luo, Jizhuang, Zhan, Cheng, Shi, Yu, Wang, Qun“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses were performed to explore the functional importance of underlying molecular changes. …”
Publicado 2019
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5796por Alack, Katharina, Weiss, Astrid, Krüger, Karsten, Höret, Mona, Schermuly, Ralph, Frech, Torsten, Eggert, Martin, Mooren, Frank-Christoph“…Furthermore, KEGG (Kyoto Encyclopedia of Genes and Genomes) and Reactome pathway analysis indicate that Ras as well as intracellular signaling by second messengers were found to be enriched in the ET individuals. …”
Publicado 2020
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5797por Xiong, Hongchun, Zhou, Chunyun, Guo, Huijun, Xie, Yongdun, Zhao, Linshu, Gu, Jiayu, Zhao, Shirong, Ding, Yuping, Liu, Luxiang“…The results showed that the hotspot regions of mutations distributed on the chromosomes were consistent among the four mutant lines and these regions were mainly located around the 50, 360 and 400 Mb positions of chromosome 1A and the distal regions of chromosomes 2A and 2BL. Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses suggested that ‘protein processing in endoplasmic reticulum’ was the most common significantly enriched pathway based on the differentially expressed genes (DEGs) between wildtype (WT) and the mutants. …”
Publicado 2019
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5798“…Gene Ontology (GO) biological functions and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway of were performed to investigate by using Bioconductor tool for analysis. …”
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5799“…Gene Ontology enrichment analysis indicated that in response to low temperature, the mostly significantly enriched differentially expressed genes were mainly involved in phosphorylation, membrane and protein kinase activity, as well as photosynthesis, light harvesting, light reaction, and alpha,alpha-trehalose-phosphate synthase activity. Kyoto Encyclopedia of Genes and Genomes enrichment analysis also indicated that the most significantly enriched pathways involved ribosome biogenesis in eukaryotes, phenylalanine metabolism, circadian rhythm, porphyrin and chlorophyll metabolism, photosynthesis of antenna proteins, photosynthesis, and carbon fixation in photosynthetic organisms. …”
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5800por Li, Chun, Du, Xia, Liu, Yang, Liu, Qi-Qi, Zhi, Wen Bing, Wang, Chun Liu, Zhou, Jie, Li, Ye, Zhang, Hong“…The underlying mechanisms of the therapeutic effect for rougui-fuzi were investigated with gene ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
Publicado 2020
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