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5821“…METHODS: A systematic network pharmacology analysis was conducted by integrating construction of SZC compound database and AM target database, prediction of potential active compounds and targets by molecular docking combined with compound-target prediction graph (CTPG), protein-protein interaction (PPI) analysis, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. …”
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5822“…Differentially expressed genes (DEGs) extracted from 4 Gene Expression Omnibus (GEO) cohorts were subjected to functional enrichment analyses by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genome (KEGG) pathway analysis. …”
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5823por Zhang, Beihua, Xue, Hong, Wang, Wei, Chen, Ting, Su, Min, Kang, Nan, Yang, Jianqin, Bian, Zhaoxiang, Wang, Fengyun, Tang, Xudong“…Protein interaction network and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that the differentiated proteins were mainly involved in the protein ubiquitination pathway and mitochondrial dysfunction. …”
Publicado 2020
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5824“…The enrichment analysis of the biological processes in Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes pathways was performed on the ceRNA‐related DEmRNAs. …”
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5825por Yu, Anze, Li, Minghao, Xing, Changsheng, Chen, Danlei, Wang, Cikui, Xiao, Qiao, Zhang, Liang, Pang, Yingxian, Wang, Yong, Zu, Xiongbing, Liu, Longfei“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to predict the functions of these circRNAs. …”
Publicado 2020
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5826por Bao, Lin, Zhao, Ye, Liu, ChenChen, Cao, Qi, Huang, Yu, Chen, Ke, Song, Zhengshuai“…DAVID was performed to assess Gene ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. The protein-protein interaction (PPI) network and modules were constructed. …”
Publicado 2020
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5827“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were subsequently performed to study the function and pathway enrichment of the identified DEGs. …”
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5828“…Subsequently, the Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed on these DEGs using the DAVID database, and the protein-protein interaction (PPI) network was constructed using the STRING database and analyzed using the Cytoscape software. …”
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5829por Han, Min, Liu, Zhen, Xu, Yingying, Liu, Xiangtian, Wang, Dewei, Li, Fan, Wang, Yun, Bi, Jianzhong“…The data were analyzed by gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses, and pathways that might be related to synaptic or neuron development and growth were constructed. …”
Publicado 2020
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5830“…Moreover, hundreds of pathways were predicted to participate in salt stress response in S. salsa by Gene Ontology (GO), MapMan and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses, including ion transport and sequestration as well as photoprotection of photosystem (PS) II. …”
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5831por Liu, Kaichao, Luo, Jing, Shao, Chenye, Ren, Zhijian, Sun, Sai, Zhu, Yihao, Zhou, Hai, Jiang, Zhisheng, Li, Xiaokun, Gu, Wenfeng, Xu, Youtao, Qiang, Yong, Ren, Binhui, Xu, Lin, Wu, Haiwei, Shen, Yi“…The in vivo and in vitro effects of down-regulation and upregulation of SYT12 were studied using short-interfering RNA (si-RNA) and overexpression plasmids, respectively. The Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) pathway analysis, quantitative reverse transcription-polymerase chain reaction (qRT-PCR), and Western blot investigated the molecular mechanisms of SYT12 expression in LUAD. …”
Publicado 2020
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5832por Lu, Jun, Liu, Jian Ning, Sarsaiya, Surendra, Duns, Gregory Joseph, Han, Jing, Jin, Leilei, Chen, Jishuang“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways enrichment analysis on differential expressed unigenes (DEGs) revealed that multiple metabolic pathway were enriched significantly, such as ‘Starch and sucrose metabolism’, ‘Purine metabolism’, ‘Photosynthesis’ and six transcription factors (MYB, WRKY, bHLH, lateral organ boundaries domain (LBD), homeodomain-zipper (HD-ZIP) and Ethylene-responsive factor (ERF)) play a key role in difference of transcriptome between T2 line and T2Plus line. …”
Publicado 2020
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5833“…Moreover, lncRNAs AC124804.1 and MIR34AHG were identified using K-M survival analysis and the potential function of these two lncRNAs was predicted using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes functional enrichment. …”
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5834“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed to determine the biological functions and pathways of the upregulated DEGs, and a protein-protein interaction (PPI) network was subsequently constructed to screen the hub genes. …”
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5835por Xue, Kai, Cao, Jinfeng, Wang, Yinan, Zhao, Xue, Yu, Dan, Jin, Chunshun, Xu, Chengbi“…Genes in those modules were intersected with DEGs for gene ontology and Kyoto Encyclopedia of Genes and Genomes functional enrichment analysis. …”
Publicado 2019
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5836por Chen, Quanquan, Huang, Ran, Xu, Zhenxiang, Zhang, Yaxin, Li, Li, Fu, Junjie, Wang, Guoying, Wang, Jianhua, Du, Xuemei, Gu, Riliang“…Gene ontology (GO) analysis indicated that the 41 BL proteins were primarily involved in the response to stress and stimuli. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis found that the BL proteins were enriched in several defense pathways, such as the ascorbate and aldarate metabolic pathways. …”
Publicado 2020
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5837por Zhou, Wei, Wu, Jiarui, Zhu, Yingli, Meng, Ziqi, Liu, Xinkui, Liu, Shuyu, Ni, Mengwei, Jia, Shanshan, Zhang, Jingyuan, Guo, Siyu“…In addition, we analyzed the mechanism of action of the predicted targets by Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analyses. …”
Publicado 2020
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5838por Zhang, Jingyuan, Liu, Xinkui, Wu, Jiarui, Zhou, Wei, Tian, Jinhui, Guo, Siyu, Jia, Shan Shan, Meng, Ziqi, Ni, Mengwei“…In addition, we analyzed the mechanism of action of the predicted targets by the Kyoto Encyclopedia of Genes and Genomes and gene ontology analyses. …”
Publicado 2020
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5839“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were carried out to further explore the DN mechanism and therapeutic effect of AM. …”
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5840“…Methods: The expression profiles of the genes were extracted from Gene Expression Omnibus (GEO), The Cancer Genome Atlas (TCGA), International Cancer Genome Consortium (ICGC), Cancer Cell Line Encyclopedia (CCLE), Gene Expression Profiling Interactive Analysis (GEPIA), and The Human Protein Atlas databases. …”
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