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7081“…The hub genes corresponding to the differential miRNA were then identified by using the Xiantao academic tool, GO (Gene Ontology), and KEGG (Kyoto Encyclopedia of Genes and Genomes). Afterward, we used the miEAA database to perform gene set enrichment analysis (GSEA) of differential miRNA, and used Xiantao academic tools again to conduct the ceRNA network based on the target genes. …”
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7082por Li, Feiran, Huang, Huiying, Xu, Jing, Tao, Lei, Zhou, Liang, Hsueh, Chiyao, Gong, Hongli, Zhang, Ming“…Both univariate and multivariate analyses were used to screen for differential metabolites. Kyoto Encyclopedia of Genes and Genomes (KEGG) metabolic pathway enrichment analysis was further used to explore the metabolic changes. …”
Publicado 2023
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7083por Yu, Yunfeng, Zhou, Manli, Long, Xi, Yin, Shuang, Hu, Gang, Yang, Xinyu, Jian, Weixiong, Yu, Rong“…Reactom database was applied for Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. …”
Publicado 2023
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7084por Bi, Yingxin, Liu, Xianjun, Liu, Yue, Wang, Mengyuan, Shan, Yaming, Yin, Yuhe, Meng, Xianglong, Sun, Fengjie, Li, Hao, Li, Zhandong“…The regulatory functions of these microRNAs in the pathogenesis of EIF in mice were further explored based on Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses with a total of over 20,000–30,000 target genes annotated and 44 metabolic pathways enriched in the experimental groups based on GO and KEGG databases, respectively. …”
Publicado 2023
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7085“…The DEGs were evaluated by a gene set enrichment analysis as well as Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses. A protein interaction network, univariate Cox regression, and Lasso regression were used to screen out hub genes correlated with survival. …”
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7086“…Further, we performed Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of the potential target genes of miR-210 to examine their related diseases and network interactions. …”
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7087por Hu, Hao, Wang, Zhi-Wen, Hu, Shuang, Xiang, Yuan, Deng, Yang, Wan, Fu-Jian, Zhang, Tong-Cun, Yang, Zhong-Yi, Liao, Xing-Hua“…The biological signaling pathways implicated in GNPNAT1 were investigated through function enrichment analysis including Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and gene set enrichment analysis. …”
Publicado 2023
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7088por Zhou, Hang, Xu, Mingming, Hu, Ping, Li, Yuezheng, Ren, Congzhe, Li, Muwei, Pan, Yang, Wang, Shangren, Liu, Xiaoqiang“…Further analyses followed, including those using Protein-Protein Interaction (PPI), Gene Ontology (GO) function enrichment analysis, and the Kyoto Encyclopedia of Genes and Genomes (KEGG). Potential hub genes were screened using three machine learning methods, and they were later verified using GSE132714 and GSE166253. …”
Publicado 2023
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7089“…The chosen candidate genes were then subjected to analyses of protein-protein interactions, gene ontology enrichment, and Kyoto Encyclopedia of Genes and Genomes pathway enrichment. …”
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7090“…Functional Correlation enrichment analyses were conducted based on Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and the Reactome database to reveal AD-associated biological functions and key pathways. …”
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7091por Wang, Hongli, Cheng, Xi, Shi, Qiyu, Xu, Jie, Chen, Dongliang, Luo, Chang, Liu, Hua, Cao, Li, Huang, Conglin“…Gene Ontology classification and Kyoto Encyclopedia of Genes and Genomes pathway analyses showed that the DEGs were enriched in 57 pathways, especially starch and sucrose metabolism, phenylpropane biosynthesis, MAPK signaling, fructose and mannose metabolism, and oxidative phosphorylation. …”
Publicado 2023
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7092por Song, Jinjing, Liang, Kai, Wei, Tongtong, Li, Li, Huang, Zhiguang, Chen, Gang, Mao, Naiquan, Yang, Jie“…METHODS: Differentially expressed genes (DEGs), gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were identified by RNA sequencing (RNA-Seq) between thirteen LUAD tissues and five normal lung tissues. …”
Publicado 2023
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7093por Song, Fengcheng, Ma, Shubao, Zhang, Yujiao, Yang, Xiaoying, Zhang, Haolin, Han, Yingying, Liu, Yuning, Gao, Fuli, Yuan, Zhengrong“…GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genome) annotations indicated that genes in gut samples were highly associated with metabolic functions. …”
Publicado 2023
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7094“…Gene set enrichment analysis analysis displayed Kyoto encyclopedia of genes and genomes and gene ontology pathways enriched in risk groups, such as focal adhesion, pathways in cancer, epidermal cell differentiation. …”
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7095“…In total, 1,623, 142, and 842 genes were differentially expressed in MT versus LT, HT versus LT, and HT versus MT, respectively. Moreover, Kyoto Encyclopedia of Genes and Genomes analysis revealed that these differentially expressed genes were mainly involved in the Hippo signaling pathway, MAPK signaling pathway, and Toll−like receptor signaling pathway. …”
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7096por Shi, Yinli, Sheng, Pei, Guo, Ming, Chen, Kai, Zhou, Hongguang, Wu, Mianhua, Li, Wenting, Li, Bo“…Both possible biological and immune infiltration functions were investigated using Principal Component Analysis (PCA), Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and immunoassays. …”
Publicado 2023
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7097por Zhang, Xiao, Wan, Mengyao, Min, Xiaoli, Chu, Guanglei, Luo, Yumin, Han, Ziping, Li, Wei, Xu, Ran, Luo, Jichang, Li, Wenjing, Yang, Yutong, Ma, Yan, Jiao, Liqun, Wang, Tao“…We descriptively summarized the included studies, conducted meta‐analysis under a random effects model, and did bioinformatics analysis including Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. …”
Publicado 2023
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7098por Zheng, Jia-Lin, Wang, Xiao, Song, Zhe, Zhou, Peng, Zhang, Gui-Ju, Diao, Juan-Juan, Han, Cheng-En, Jia, Guang-Yuan, Zhou, Xu, Zhang, Bao-Qing“…Bioinformatics resources from the Database for Annotation, Visualization and Integrated Discovery were utilized for gene ontology biological process and Kyoto Encyclopedia of Genes and Genomes network pathway enrichment analysis, and molecular docking techniques were adopted to verify the combination of major active ingredients and core targets. …”
Publicado 2023
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7099por Wang, Ji, Zhang, Xianyu, You, Zilong, Meng, Yuhuan, Fan, Xijie, Qiao, Guangdong, Pang, Da“…The differentially expressed (DE) mRNA, microRNA (miRNA), and long noncoding RNA (lncRNA) target genes were annotated using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) to reveal the relevant biological processes.The ceRNA networks were constructed to show distinct regulation, and the mRNAs involved were annotated. …”
Publicado 2023
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7100por Zheng, Ming-zhi, Lou, Jun-sheng, Fan, Yun-peng, Fu, Chun-yan, Mao, Xing-jia, Li, Xiang, Zhong, Kai, Lu, Lin-huizi, Wang, Lin-lin, Chen, Ying-ying, Zheng, Liang-rong“…Gene Ontology, Kyoto Encyclopedia of Genes and Genomes and Gene Set Enrichment Analysis were evaluated, and a competing endogenous RNA network was constructed, to evaluate the role of circRNAs related to autophagy in SICM. …”
Publicado 2023
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