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7161por Zhang, Qingwei, Chen, Ximing, Hu, Yingying, Zhou, Tong, Du, Menghan, Xu, Run, Chen, Yongchao, Tang, Pingping, Chen, Zhouxiu, Li, Jiamin“…Gene ontology (GO) process and the Kyoto Encyclopedia of Genes and Genomes (KEGG) were applied to investigate the biological function and pathway of MeDEGs. …”
Publicado 2023
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7162“…To predict the functions of these microbiota, Kyoto Encyclopedia for Genes and Genomes and MetaCyc analysis were conducted and immunometabolism might be an important pathway. …”
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7163por Guo, Chen, Zhang, Pengpeng, Li, Junhui, Zhou, Chen, Yang, Zhen, Zhang, Yu, Luo, Yulin, Zhou, Jie, Cai, Yu, Ming, Yingzi“…Feces were collected from each participant and analyzed by 16S rRNA gene sequencing, which included species composition analysis at the phylum and family levels, α and β diversity analysis, LEfSe, Kyoto Encyclopedia of Genes and Genome (KEGG) and Clusters of Orthologous Groups of proteins (COG) analysis. …”
Publicado 2023
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7164“…Then we analyzed the enrichment of NRGs in the signature using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. Finally, we analyzed the immunological characteristics of the COAD patients by single sample gene set enrichment analysis (ssGSEA) and predicted the possible immune checkpoints. …”
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7165“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses proved that the NF-κB and toll-like receptor signaling pathways serve a key function in CDG therapy of PD. …”
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7166por Wu, Zhongyi, Zhang, Gaohua, Zhao, Ran, Gao, Qi, Zhao, Jinchen, Zhu, Xiaoxu, Wang, Fangyan, Kang, Zhensheng, Wang, Xiaojing“…The response of Yr10 to stripe rust involved various processes and activities, as indicated by the results of Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. …”
Publicado 2023
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7167“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were performed, and we then generated protein-protein interaction. …”
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7168“…The DAVID database was used to analyze gene functions, such as the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO) enrichment. …”
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7169“…Single-drug signals were evaluated using the reporting odds ratio (ROR) and proportional reporting ratio (PRR), and drug pathways were investigated using the Kyoto Encyclopedia of Genes and Genomes (KEGG). DDIs were evaluated using the Ω shrinkage measure and Chi-square statistics models. …”
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7170“…METHODS: In silico analyses were performed to compare UM and normal melanocyte cells via Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Set Enrichment Analysis (GSEA). …”
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7171por Zhong, Shan, Chen, Chengshui, Yang, Li, Jin, Meiling, Zeng, Yiming, Zou, Gang-Ming, Zhang, Qingying, Wang, Yun“…These candidate circRNAs were enriched in inflammation-associated pathways (such as mTOR, B-cell receptor, and NF-κB signaling pathways) via Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses. …”
Publicado 2023
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7172por Wang, Yu, Yang, Junjie, Lu, Jieru, Wang, Qingjie, Wang, Jian, Zhao, Jianyuan, Huang, Yuqiang, Sun, Kun“…Further Gene Ontology/Kyoto Encyclopedia of Genes and Genomes analysis revealed that these genes were primarily involved in molecular functions and biological processes related to chemical stress, oxidative stress, cellular response to starvation, response to nutrient levels, cellular response to external stimulus, and cellular response to extracellular stimulus. …”
Publicado 2023
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7173por Zhu, Liwen, Chen, Chuqin, Kang, Meiyun, Ma, Xiaopeng, Sun, Xiaoyan, Xue, Yao, Fang, Yongjun“…Enriched biological functions and signaling pathways were then identified by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Hub genes were selected by overlapping those between down-regulated genes in GSE73578, GSE4698 and the hub module. …”
Publicado 2023
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7174por Zhu, Ankang, Zong, Yan, Wei, Shuai, Li, Yinuo, Fan, Yan, Liu, Shaodong, Gao, Xingcai“…The Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicate that NCKAP1 is strongly associated with cell death and tumor immunity. …”
Publicado 2023
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7175“…Thereafter, Gene Ontology (GO) analysis, enrichment using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database, gene set enrichment analysis (GSEA), and protein–protein interaction (PPI) network analysis was conducted. …”
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7176“…Common targets were uploaded to the Metascape database for gene ontology terms and Kyoto Encyclopedia of Genes and Genomes pathway analyses. A protein–protein interaction network was established, and topological analysis was performed to obtain hub genes. …”
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7177por Tang, Wei, Zhang, Flora, Byun, Jung S., Dorsey, Tiffany H., Yfantis, Harris G., Ajao, Anuoluwapo, Liu, Huaitian, Pichardo, Margaret S., Pichardo, Catherine M., Harris, Alexandra R., Yang, Xiaohong R., Figueroa, Jonine D., Sayed, Shahin, Makokha, Francis W., Ambs, Stefan“…Mutations targeting TBX3 were confined to European Americans and those targeting the FBXW7 tumor suppressor to African American patients whereas mutations in the ARID1A gene that are known to confer resistance to endocrine therapy were distinctively enriched among Kenyan patients. A Kyoto Encyclopedia of Genes and Genomes pathway analysis could link FBXW7 mutations to an increased mitochondrial oxidative phosphorylation capacity in tumors carrying these mutations. …”
Publicado 2023
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7178por Gao, Lun, Ye, Zhang, Peng, Shu, Lei, Pan, Song, Ping, Li, Zhiyang, Zhou, Long, Hua, Qiuwei, Cheng, Li, Wei, Hangyu, Liu, Junhui, Cai, Qiang“…In addition, Gene set enrichment analysis (GSEA), Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated that BCL2A1 was significantly correlated with the immune response and immune-related pathways, and BCL2A1 expression was positively correlated with microenvironmental parameters (immune, stromal, and ESTIMATE scores) and macrophage infiltration. …”
Publicado 2023
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7179por Zhao, Jikun, Kuang, Dadong, Cheng, Xianshuo, Geng, Jiwei, Huang, Yong, Zhao, Haojie, Yang, Zhibin“…Pathway and protein analyses were performed via resources from the Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG). Visual analysis of the KEGG pathway was carried out according to ClueGO and CluePedia to establish the PPI network of gene interaction between pathways; the genes with the highest connectivity were screened by the molecular complex detection analysis method as Hub genes in this study; gene expression was verified by GEPIA online analysis tool, and Kaplan–Meier survival curve was drawn for prognosis analysis. …”
Publicado 2023
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7180por Yao, Youming, Zhang, Hongyu, Guo, Rong, Fan, Jiangmin, Liu, Siyi, Liao, Jianglin, Huang, Yingjin, Wang, Zhaohai“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that these DEGs were highly involved in chlorophyll metabolism, chloroplast development, and photosynthesis. …”
Publicado 2023
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