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8601por Pang, Yipeng, Wang, Yushi, Zhou, Xinyu, Ni, Zhu, Chen, Wenjing, Liu, Yi, Du, Wenlong“…Analysis of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) data demonstrated that differentially expressed genes (DEGs) are primarily important for immune responses and the PI3K-Akt pathway. …”
Publicado 2023
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8602por Wang, Xu, Ban, Chao, Li, Jia-Xuan, Luo, Qing-Yuan, Qin, Ji-Xiao, Xu, Yi-Qing, Lu, Qi, Tian, Xing-Zhou“…A total of 532 differentially expressed genes (DEGs) between the CON and HS were obtained using transcriptome sequencing. Kyoto Encyclopedia of Genes and Genomes analysis identified upregulated (p < 0.05) DEGs mainly related to vascular smooth muscle contraction, alpha-linolenic acid metabolism, biosynthesis of unsaturated fatty acids, the VEGF signalling pathway, and proteoglycans in cancer; downregulated (p < 0.05) DEGs mainly related to the NOD-like receptor signalling pathway, influenza A, cytokine-cytokine receptor interaction, haematopoietic cell lineage, and African trypanosomiasis. …”
Publicado 2023
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8603por Wang, Zhihuai, Wu, Siyuan, Wang, Gaochao, Yang, Zhen, Zhang, Yinjie, Zhu, Chunfu, Qin, Xihu“…In addition, the underlying mechanism of ARHGAP21 involved in CCA was investigated by the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis, and the most significant signaling pathway was identified through gene set enrichment analysis (GSEA) and the Western blot method. …”
Publicado 2023
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8604por Shen, Yan, Yu, Fangzheng, Qiu, Lili, Gao, Mengjia, Xu, Puxin, Zhang, Lingjun, Liao, Xiangyan, Wang, Min, Hu, Xiangyu, Sun, Yan, Pan, Yihuai“…Compared to the wild type, fluoride-resistant strain significantly increased the diversity and difference of oral microbial community at the initial stage of biofilm formation (4 and 24 h) and at a low fluoride environment (0 and 275 ppm NaF) (P < 0.05). Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that fluoride-resistant strain enhanced the metabolic pathways and glucose transfer. …”
Publicado 2023
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8605“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis was obtained from Database for Annotation, Visualization and Integrated Discovery (DAVID). …”
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8606por Wang, Geng-Chong, Zhou, Mi, Zhang, Yan, Cai, Hua-Man, Chiang, Seok-Theng, Chen, Qi, Han, Tian-Zhen, Li, Rong-Xiu“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis along with R packages “estimate” and “ssGSEA” were performed to reveal the mechanism of risk difference. …”
Publicado 2023
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8607“…Among them, 38 metabolites were identified by univariate analysis, and 7 metabolites that were altered by conditioning therapy were identified by multivariate analysis. The Kyoto Encyclopedia of Genes and Genomes (KEGG) database was used for pathway enrichment analysis. …”
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8608por Choi, Yeong A., Jeong, Areum, Woo, Chang-Hoon, Cha, Soon Cheol, Park, Do Young, Sagong, Min“…Target genes and predicted pathways of miRNAs were investigated via pathway enrichment analysis using the Kyoto Encyclopedia of Genes and Genomes database. A total of 161 miRNAs from eyes with typical AMD and 185 miRNAs from eyes with PCV were differentially expressed. 33 miRNAs were commonly upregulated, and 77 miRNAs were commonly downregulated in both typical AMD and PCV groups. …”
Publicado 2023
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8609por Xu, Jiawen, Si, Haibo, Zeng, Yi, Wu, Yuangang, Zhang, Shaoyun, Liu, Yuan, Li, Mingyang, Shen, Bin“…In total, 148 DCS-enriched Gene Ontology (GO) terms were identified, such as mast cell degranulation (GO:0043303); 15 DCS-enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were identified, such as the sphingolipid signalling pathway (ko04071). …”
Publicado 2023
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8610por Zhang, Huibin, Liu, Yangguang, Han, Zheng, Xu, Qilong, Zhang, Nannan, Wang, Jinglin, Zheng, Xianrui, Ding, Yueyun, Yin, Zongjun, Zhang, Xiaodong“…Gene Ontology (GO) indicated that differentially expressed lncRNAs associated with apoptotic process were highly enriched. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis of lncRNA target genes found that the Wnt signaling pathway and PI3K-Akt signaling pathway were both enriched. …”
Publicado 2023
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8611“…The important functions of the CCP-related genes were further investigated using Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and single-sample Gene Set Enrichment Analysis (ssGSEA). …”
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8612por Cai, Kaier, Xie, Zhilong, Liu, Yingao, Wu, Junfeng, Song, Hao, Liu, Wang, Wang, Xinyi, Xiong, Yinghuan, Gan, Siyuan, Sun, Yanqin“…After using GEO2R to analyze the differentially expressed genes (DEGs) between lung cancer and normal tissues online, the common DEGs of the five sets of chips were obtained using a Venn online tool and imported into the Database for Annotation, Visualization, and Integrated Discovery (DAVID) database for Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. …”
Publicado 2023
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8613“…The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) of the differentially expressed genes (DEGs) between three immune-based subtypes were subsequently analyzed for functional enrichment pathways. …”
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8614“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses showed the biological functions of the differentially expressed circRNAs target genes. …”
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8615por He, Zhigang, Ding, Baopeng, Ali, Qurban, Liu, Huiyu, Zhao, Ying, Wang, Xiujuan, Han, Yingzuo, Dong, Huan, Divvela, Praveen Kumar, Juan, Yinghua“…The results showed that the low-temperature (10°C) and high-efficiency cellulose-degrading bacterium Bacillus subtilis K1 was 4,060,823 bp in genome size, containing 4,213 genes, with 3,665, 3,656, 2,755, 3,240, 1,261, 3,336 and 4,003 genes annotated in the non-redundant protein sequence database (NR), Pfam, clusters of orthologous groups of proteins (COGs), Genome Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Annotation databases, respectively. …”
Publicado 2023
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8616“…In addition, several GO and Kyoto Encyclopedia of Genes and Genomes (KEGG) items associated with immune response, JAK STAT signal pathway, and cell cycle were significantly enriched in the high PLEKHA4 expression phenotype pathway. …”
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8617“…Finally, Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were performed on the risk genes to explore the related mechanism of DKD merging IBD. …”
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8618“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were performed to deduce ZGJTSXF-associated targets and pathways. …”
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8619por Sun, Yanfa, Zhang, Yeqiu, Wu, Qiong, Lin, Rulong, Chen, Hongping, Zhang, Min, Lin, Jiaqi, Xu, Enrong, Li, Meng, Cai, Yicheng, Deng, Fan, Yue, Wen, Pan, Haozhe, Jiang, Xiaobing, Li, Yan“…The gene ontology (GO) terms and Kyoto Encyclopedia of Genes and Genome (KEGG) pathways for the genes of common differential variants between HEN and LEN ducks were determined. …”
Publicado 2023
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8620“…The DAVID database was used for Kyoto Encyclopedia of Genes and Genomes (KEGG) and gene ontology (GO) enrichment analysis to clarify the biological processes and pathways involved in the intersection targets, and AutoDockTools was adopted for molecular docking verification of core targets. …”
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