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8621por Zhu, Anchao, Liu, Yingying, Li, Zongmin, He, Ying, Bai, Lijing, Wu, Youtian, Zhang, Yuying, Huang, Ying, Jiang, Ping“…When predicting metagenomes, there were 18 Kyoto Encyclopedia of Genes and Genomes pathways and one BugBase function difference in both groups (all q < 0.05). …”
Publicado 2023
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8622“…We then conducted systematic functional enrichment analyses of the DEGs based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG), and further predicted the interactions of different proteins using the Search Tool for the Retrieval of Interacting Genes (STRING). …”
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8623por Chen, Xianghan, Gong, Ruining, Wang, Jia, Ma, Boyi, Lei, Ke, Ren, He, Wang, Jigang, Zhao, Chenyang, Wang, Lili, Yu, Qian“…Genetic alterations of hnRNPs were analyzed using cBioportal, and Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed to illustrate the biological functions of co-expressed genes of hnRNPs. …”
Publicado 2022
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8624“…Analyses of Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) revealed that the differential genes of the two patient groups were primarily concentrated in neural active ligand-receptor interaction and cytokine-cytokine receptor interaction. …”
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8625por Lai, Zhen-Zhen, Zhang, Jie, Zhou, Wen-Jie, Shi, Jia-Wei, Yang, Hui-Li, Yang, Shao-Liang, Wu, Jiang-Nan, Xie, Feng, Zhang, Tao, Li, Ming-Qing“…Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes Pathway analysis, Gene Set Enrichment Analysis, and Protein-protein interactions analysis were performed to investigate potential biological functions and signaling pathways. …”
Publicado 2023
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8626por Hossain, Md Arju, Rahman, Md Habibur, Sultana, Habiba, Ahsan, Asif, Rayhan, Saiful Islam, Hasan, Md Imran, Sohel, Md, Somadder, Pratul Dipta, Moni, Mohammad Ali“…RESULT: Stress-responsive, membrane receptor, and induction pathways were mostly involved in gene ontology (GO) pathways, whereas apoptosis and inflammatory pathways were significantly associated in the Kyoto encyclopedia of genes and genomes (KEGG). The top 20 hub genes were detected utilizing the shortest path ranked by degree method and protein-protein interaction (PPI), as well as molecular docking and molecular dynamics simulation were performed, revealing apigenin's strong interaction with hub proteins (MAPK3, RELA, MAPK1, EP300, and AKT1). …”
Publicado 2023
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8627por He, Kang, Li, Jingze, Huang, Xuemiao, Zhao, Weixin, Wang, Kai, Wang, Taiwei, Chen, Junyu, Wang, Zeyu, Yi, Jiang, Zhao, Shuhua, Zhao, Lijing“…KNL1 and its related differentially expressed genes were used to draw a volcano map, construct a PPI protein interaction network, and perform gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), gene set enrichment analysis (GSEA) and immune infiltration analysis to predict the function of KNL1 during UCEC progression. …”
Publicado 2023
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8628por Zaid, Imdad Ullah, Faheem, Mohammad, Zia, Muhammad Amir, Abbas, Zaheer, Noor, Sabahat, Ali, Ghulam Muhammad, Haider, Zeeshan“…However, the clustering of DEGs, through utilizing the Kyoto Encyclopedia of Genes and Genomes (KEGG), revealed that the DEGs in the metabolic category were frequently annotated for phenylpropanoid biosynthesis. …”
Publicado 2023
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8629“…DEGs were enriched in signaling pathways regulating the glycosaminoglycan biosynthesis-chondroitin sulfate/dermatan sulfate and ECM-receptor interaction via Kyoto Encyclopedia of genes and genomes (KEGG) pathway enrichment analysis. …”
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8630“…Finally, the functional pathways and the molecular mechanism of tuberculosis were clarified in combination of the prediction results of key gene miRNAs, and by Gene Ontology (GO) enrichment analysis and the Kyoto Encyclopedia Genes and Genomes (KEGG) pathway annotation analysis. …”
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8631“…Then, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed on the shared genes. …”
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8632“…By using the “clusterProfiler” R package, we performed Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment. …”
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8633“…The differentially expressed proteins were analyzed by Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and protein-protein interaction (PPI) networks analyses. …”
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8634por Luo, Xi, Zheng, Haishan, Nai, Zhen, Li, Mingying, Li, Yonggang, Lin, Na, Li, Yunxiu, Wu, Ze“…Moreover, we conducted a weighted gene co-expression network analysis (WGCNA) to identify the macrophage-related key modules and genes, and conducted Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analyses for the functional exploration. …”
Publicado 2023
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8635por Hu, Feng, Yu, Huajiong, Zong, Ji, Xue, Jianing, Wen, Zuoshi, Chen, Mengjia, Du, Luping, Chen, Ting“…Differential metabolites were screened using principal component analysis (PCA), partial least squares discriminant analysis (PLS-DA), and orthogonal partial least squares discriminant analysis (OPLS-DA). Kyoto Encyclopedia of Genes and Genomes (KEGG) provided metabolic pathways related to these metabolites. …”
Publicado 2023
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8636“…To explore the potential biological function of the hub modules, Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted. …”
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8637“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway were performed for patients between the high-DDRscore and low-DDRscore groups. …”
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8638por Li, Zhengzhe, Chen, Dongdong, Pan, Renjie, Zhong, Yanbiao, Zhong, Tianyu, Jiao, Zhigang“…Targets of the differentially expressed miRNAs were predicted by miRanda and RNAhybrid, and their involvement in the signaling pathways and cellular function has been analyzed through the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO). …”
Publicado 2023
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8639por Zhang, Xuguang, Li, Xiangyi, Li, Hailong, Zhou, Mingyan, Zhang, Yuxin, Lai, Weiyong, Zheng, Xiuwen, Bai, Feihu, Zhang, Junqing“…METHODS: The protein-protein interaction (PPI) network, Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed to predict the potential targets and mechanism of A. officinarum toward improving T2DM. …”
Publicado 2023
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8640por Lai, Wujiang, Liao, Jinrong, Li, Xiaoxuan, Liang, Peili, He, Liqing, Huang, Keke, Liang, Xiaomei, Wang, Yifeng“…Immune and metabolism related genes were collected from Immport and Kyoto encyclopedia of genes and genomes (KEGG) database respectively. …”
Publicado 2023
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