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9041“…Next, we made use of the Database for Annotation, Visualization and Integrated Discovery (DAVID) to analyze Kyoto Encyclopedia of Gene and Genome (KEGG) pathway and gene ontology (GO). …”
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9042“…RESULTS: Here we analyze six different community detection algorithms, namely, Combo, Conclude, Fast Greedy, Leading Eigen, Louvain and Spinglass, on two important biological networks to find their communities and evaluate the results in terms of topological and functional features through Kyoto Encyclopedia of Genes and Genomes pathway and Gene Ontology term enrichment analysis. …”
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9043“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed using the Database for Annotation, Visualization, and Integrated Discovery. …”
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9044“…Moreover, pathway enrichment analysis using the Kyoto Encyclopedia of Genes and Genomes (KEGG) suggested the potential implication of the TNF signaling pathway and Toll-like receptor signaling pathway. …”
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9045por Zhang, Zhuangbiao, Tang, Jishun, Di, Ran, Liu, Qiuyue, Wang, Xiangyu, Gan, Shangquan, Zhang, Xiaosheng, Zhang, Jinlong, Hu, Wenping, Chu, Mingxing“…Then, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed based on the predicted target genes. …”
Publicado 2019
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9046por Chen, Ye-Hui, Lin, Ting-Ting, Wu, Yu-Peng, Li, Xiao-Dong, Chen, Shao-Hao, Xue, Xue-Yi, Wei, Yong, Zheng, Qing-Shui, Huang, Jin-Bei, Xu, Ning“…Functional annotation was then performed using gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses. …”
Publicado 2019
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9047“…Differentially expressed genes (DEGs) were identified using the Linear Models for Microarray data method and a protein–protein interaction (PPI) network was constructed using data from the Search Tool for the Retrieval of Interacting Genes database followed by module analysis. Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis was performed using the Database for Annotation, Visualization and Integrated Discovery. …”
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9048por Li, Li, Zhu, Zuan, Zhao, Yanchao, Zhang, Qi, Wu, Xiaoting, Miao, Bei, Cao, Jiang, Fei, Sujuan“…Differentially expressed genes (DEGs) were analyzed and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology (GO) analysis were used to annotate the unique biological significance and important pathways of enriched DEGs. …”
Publicado 2019
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9049por Li, Guoqi, Zhang, Piao, Zhang, Wenkan, Lei, Zhong, He, Jiaming, Meng, Jiahong, Di, Tuoyu, Yan, Weiqi“…Gene ontology (Go) and Kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analyses of DEGs were performed. …”
Publicado 2019
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9050por Luo, Xin, Deng, Changkai, Liu, Feng, Liu, Xing, Lin, Tao, He, Dawei, Wei, Guanghui“…The gene ontology (GO) analysis was performed to uncover the biological functions of differentially expressed genes, and the kyoto encyclopedia of genes and genomes (KEGG) pathway enrichment analysis was applied to find out the related signal pathways. …”
Publicado 2019
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9051por Sulayman, Ablat, Tian, Kechuan, Huang, Xixia, Tian, Yuezhen, Xu, Xinming, Fu, Xuefeng, Zhao, Bingru, Wu, Weiwei, Wang, Dan, Yasin, Aynur, Tulafu, Hanikezi“…Moreover, Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses showed that some differentially expressed mRNAs, such as DKK1, DSG4, FOXE1, Hoxc13, SFRP1, SFRP2, and Wnt10A overlapped with lncRNAs targets, and enriched in important hair follicle developmental pathways, including Wnt, TNF, and MAPK signaling pathways. …”
Publicado 2019
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9052por Li, Zhuoling, Wu, Jia, Wei, Weishi, Cai, Xiaomin, Yan, Jing, Song, Jiaxi, Wang, Cheng, Wang, Junjun“…Serum miR-186-5p levels in rats following LAD ligation were increased, and there was a decrease in myocardial miR-186-5p levels. Kyoto encyclopedia of genes and genomes (KEGG) analysis was performed to predict the related pathways of target genes of miR-186-5p, which suggested that miR-186-5p might be involved in ACS by regulating the inflammatory status and D-glucose metabolism. …”
Publicado 2019
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9053“…The possible pathways were predicted using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. In addition, the key target genes were identified using a protein-protein interaction (PPI) network, the Cancer Genome Atlas (TCGA) database, and correlation analysis. …”
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9054“…Function enrichment analysis revealed that these DEGs were located in 28 significantly enriched Kyoto Encyclopedia of Genes and Genomes pathways, including phenylpropanoid biosynthesis (for example, TRINITY_DN30766_c0_g2_i1, encoding peroxidase 20) and mitogen-activated protein kinase (MAPK) signaling (TRINITY_DN85589_c0_g1_i1, encoding WRKY transcription factor 75). …”
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9055“…The overlapping DEGs were the DEGs in both hippocampus and striatum samples. Kyoto Encyclopedia of Genes and Genomes and BioCyc databases were used to perform functional annotation and pathway analyses. …”
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9056por Huang, Ma-Sha, Liu, Jun-Yan, Xia, Xiao-Bo, Liu, Ying-Zi, Li, Xi, Yin, Ji-Ye, Peng, Jing-Bo, Wu, Lin, Zhang, Wei, Zhou, Hong-Hao, Liu, Zhao-Qian“…The nucleotide excision repair (NER) signaling pathway was identified by Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. …”
Publicado 2019
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9057Integrated analysis of long non-coding RNA and mRNA expression in different colored skin of koi carp“…To further reveal their potential functions, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were analyzed, and membrane, pigment cell development, cAMP signaling, melanogenesis and tyrosine metabolism appear to affect skin pigmentation. …”
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9058“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were further performed to uncover the key function and pathways in pulmonary fibrosis. …”
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9059por Xu, Hong-Fa, Huang, Tie-Jun, Yang, Qin, Xu, Liang, Lin, Fen, Lang, Yan-Hong, Hu, Hao, Peng, Li-Xia, Meng, Dong-Fang, Xie, Yu-Jie, Tan, Li, Qian, Chao-Nan, Huang, Bi-Jun“…To identify the molecular mechanisms involved, we performed a genome-wide and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis in breast cancer cells using RNA sequencing of gene expression profiles following the overexpression of IRF6. …”
Publicado 2019
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9060“…Furthermore, dynamic clusters and dynamic protein–protein interaction networks were identified. Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis was developed in dynamic clusters. …”
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