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901“…Our KB is constructed by fusing data automatically extracted from eight mainstream healthcare websites, three Chinese encyclopedia sites, and symptoms extracted from a larger number of EMRs as supplements. …”
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902“…Common DEGs were selected for Kyoto Encyclopedia of Genes and Genomes pathway analysis and Gene Ontology enrichment analysis. …”
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903por Hao, Zhiyun, Luo, Yuzhu, Wang, Jiqing, Hu, Jiang, Liu, Xiu, Li, Shaobin, Jin, Xiayang, Ke, Na, Zhao, Mengli, Hu, Liyan, Lu, Yujie, Wu, Xinmiao, Qiao, Lirong“…Some important Gene Ontogeny (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways that were related to lactation and mammary gland morphogenesis were found for the target genes of differentially expressed lncRNAs. …”
Publicado 2020
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904por Kim, Sang-Mo, Markkandan, Kesavan, Lee, Jong-Young, Kim, Gye-Woong, Yoo, Jae Young“…Differentially expressed gene (DEG) analysis of the two groups revealed 282 up-regulated and 189 down-regulated genes (p ≤ 0.01), linked to tissue development, striated muscle tissue development, tissue morphogenesis, and lipid metabolic process gene ontology (GO) terms. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis highlighted genes related to the calcium signaling pathway, apelin signaling pathway, and the mammalian target of rapamycin (mTOR) signaling pathway. …”
Publicado 2020
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905“…(P < 0.05) 61 LINC00092 related genes were identified; the Kyoto Encyclopedia of Genes and Genomes analysis showed that the most significant signaling pathways were: NF-κB, HIF-1 and ErbB signaling pathways. …”
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906“…Gene ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were used to explore the biological functions of the DEPs. …”
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907“…WebGestalt was employed to perform Gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses. …”
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908por Peng, Jin-lin, Wu, Ji-zhou, Li, Guo-jian, Wu, Jian-lin, Xi, Yu-mei, Li, Xiao-qing, Wang, Lei“…The gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were applied to annotate the function of DEGs. …”
Publicado 2021
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909“…Subsequently, enrichment analysis by gene ontology and Kyoto Encyclopedia of Genes and Genomes showed that 83 cell biological processes and 37 pathways were associated with breast cancer (p < 0.05), including the peroxisome proliferator-activated receptor and PI3K-Akt pathway, which are closely related to tumor cell apoptosis. …”
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910Cinnamaldehyde inhibits the growth of Phytophthora capsici through disturbing metabolic homoeostasis“…The iTRAQ results were evaluated by parallel reaction monitoring (PRM) analysis and quantitative real-time PCR (qRT-PCR) analysis. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis was used to speculate the biochemical pathways that the agent may act on. …”
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911por Yang, Xiaojie, Tian, Mengyue, Zhang, Weiguang, Chai, Tianci, Shen, Zhimin, Kang, Mingqiang, Lin, Jiangbo“…In addition, we used encyclopedia of RNA interactomes (ENCORI), gene expression profiling interactive analysis (GEPIA), and the human protein atlas to confirm the expression of hub genes in ESCC. …”
Publicado 2021
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912“…Using Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, we forecasted the potential molecular mechanisms of EAGs. …”
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913por Chen, Jiarui, Liu, Chong, Liang, Tuo, Xu, Guoyong, Zhang, Zide, Lu, Zhaojun, Jiang, Jie, Chen, Tianyou, Li, Hao, Huang, Shengsheng, Chen, Liyi, Sun, Xihua, Cen, Jiemei, Zhan, Xinli“…Database for annotation can complete gene ontology function analysis as well as Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis. …”
Publicado 2021
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914por Wang, Wei, Deng, Zhenfeng, Jin, Zongrui, Wu, Guolin, Wang, Jilong, Zhu, Hai, Xu, Banghao, Wen, Zhang, Guo, Ya“…METHODS: With the complete RNA sequence data and clinical data obtained from The Cancer Genome Atlas database and metabolism-related genes downloaded from the Kyoto Encyclopedia of Genes and Genomes database, with false discovery rate < 0.001, log fold change > 1.5 selected as the screening criteria for lncRNA, the relationship between the expression level of metabolism-related LncRNAs (MRLs) and the overall survival rate was determined by the Univariate Cox regression analyses with the establishment of the metabolic prognosis model by the application of Multivariate Cox regression analyses, revealing the different biological processes and signaling pathways in both high-risk groups and low-risk groups by Gene Ontology, Kyoto Encyclopedia of Genes and Genomes enrichment analysis, and gene set enrichment analysis, leading the expression of lncRNA to be assessed by the reverse transcription-polymerase chain reaction results. …”
Publicado 2022
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915“…GFBP2-related pathways were validated in the Cancer Cell Line Encyclopedia (CCLE) database. Expression of GFPT2 in single cell subpopulations was calculated from The Tumor Immune Single Cell Center (TISCH). …”
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916por Kambara, Takahiro, Amatya, Vishwa Jeet, Kushitani, Kei, Fujii, Yutaro, Endo, Ihiro, Takeshima, Yukio“…The expression levels of the FTL mRNA were higher in malignant mesothelioma compared with other tumors in the Cancer Cell Line Encyclopedia database, and among other genes in our previous study. …”
Publicado 2022
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917“…Gene functional analysis was performed using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Weighted gene co-expression network analysis (WGCNA) was used to screen out 18 immune-related prognostic genes. …”
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918por Jiao, Yuanyuan, Jiang, Shimin, Wang, Ying, Yu, Tianyu, Zou, Guming, Zhuo, Li, Li, Wenge“…Gene ontology and the Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were carried out to identify significant pathways. …”
Publicado 2022
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919“…Next, the Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses were performed on the module genes, followed by using protein–protein interaction network analysis and Cytoscape to find the key gene. …”
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920por Wu, Xinyan, Zheng, Xiaomei, Tang, Huaqiao, Zhao, Ling, He, Changliang, Zou, Yuanfeng, Song, Xu, Li, Lixia, Yin, Zhongqiong, Ye, Gang“…RESULTS: We identified 49 targets of curcumin against AD, and kyoto encyclopedia of genes and genomes pathway enrichment analysis demonstrated that the Alzheimer disease pathway (has05010) was significantly enriched. …”
Publicado 2022
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