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9241“…Gene ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were conducted to explore the potential target genes of the differentially expressed miRNAs and identify their putative biological function. …”
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9242por Wang, Meiqi, Zheng, Sihan, Li, Xi, Ding, Yu, Zhang, Mingyan, Lin, Lin, Xu, Hao, Cheng, Yue, Zhang, Xiaonan, Xu, Hui, Li, Shijun“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed to investigate the target DEGs in LCLMN. …”
Publicado 2020
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9243por Fu, Yongyao, Yang, Liping, Gao, Haihong, Wenji, Xu, Li, Qiang, Li, Hongqun, Gao, Jian“…A total of 34,301 unigenes showed similarity to known proteins in the database NCBI non-redundant protein (NR), Swiss-Prot proteins, InterPro proteins, Clusters of Orthologous Groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG). In addition, 1,621 genes were differentially expressed in the overlapping libraries between LL_DEGs and LD_DEGs; of these genes, 352 DEGs were obviously upregulated in L. longiflorum and downregulated in L. distichum during heat stress, including 4-coumarate, CoA ligase (4CL), caffeoyl-CoA O-methyltransferase (CCoAOMT), peroxidase, pathogenesis-related protein 10 family genes (PR10s), 14-3-3 protein, leucine-rich repeat receptor-like protein kinase, and glycine-rich cell wall structural protein-like. …”
Publicado 2020
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9244por Gu, Lifei, Hong, Fang, Fan, Kaikai, Zhao, Lei, Zhang, Chunlei, Yu, Boyang, Chai, Chengzhi“…Gene Ontology, Kyoto Encyclopedia of Genes and Genomes pathway analysis and protein–protein interaction analysis were applied to predict the potential pathway and target of AMC against renal fibrosis. …”
Publicado 2020
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9245“…The DEGs were subjected to Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis and Gene Set Enrichment Analysis (GSEA). …”
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9246“…In addition, biological functions of differentially expressed proteins (DEPs) were annotated by Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
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9247por Shen, Chong, Wang, Yujie, Wu, Zhouliang, Da, La, Gao, Shen, Xie, Linguo, Qie, Yunkai, Wang, Yinlei, Zhang, Zhe, Tian, Dawei, Hu, Hailong“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analyses, and lncRNA-miRNA-mRNA network analyses suggested that these dysregulated lncRNAs are potentially implicated in the onset and progression of BC. …”
Publicado 2020
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9248“…Then, the DEGs were analysed to identify biological pathways of dental pulp inflammation with Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis and Gene Set Enrichment Analysis (GSEA). …”
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9249por Wang, Jian, Zhang, Chuang, Zhao, Qingyao, Li, Congcong, Jin, Shuang, Gu, Xianhong“…A total of 23 differential metabolites were identified, and functional analyses were performed using the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. Among these metabolites, the concentrations of six lysophosphatidylcholines and one phosphatidylethanolamine, were lower in the HBCS group than in the NBCS group (p < 0.01). …”
Publicado 2020
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9250“…We performed gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis to further clarify the biological functions of the candidate targets. …”
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9251por Zhang, Ying, Garofano, Francesca, Wu, Xiaolong, Schmid, Matthias, Krawitz, Peter, Essler, Markus, Schmidt-Wolf, Ingo G. H.“…The functional enrichment was performed by gene ontology (GO) annotation and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis. …”
Publicado 2020
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9252por Zhang, Jing, Liu, Jason, McGillivray, Patrick, Yi, Caroline, Lochovsky, Lucas, Lee, Donghoon, Gerstein, Mark“…The increasing availability of cancer whole genome sequences and functional genomics data from the Encyclopedia of DNA Elements (ENCODE) may help address these issues. …”
Publicado 2020
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9253por Mahmood, Khalid, Orabi, Jihad, Kristensen, Peter Skov, Sarup, Pernille, Jørgensen, Lise Nistrup, Jahoor, Ahmed“…In the transcriptome analysis, we identified 6675 and 5151 differentially expressed genes (DEGs) in DH372 and Helltop, respectively, compared to non-inoculated control plants. A Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that DEGs were associated with glycolysis and the mechanistic target of rapamycin (mTOR) signaling pathway in Helltop, whereas carbon fixation in photosynthesis organisms were represented in DH372. …”
Publicado 2020
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9254por Gao, Lingling, Li, Xiao, Nie, Xin, Guo, Qian, Liu, Qing, Qi, Yue, Liu, Juanjuan, Lin, Bei“…Intersection of DEGs were further employed for Gene Ontology (GO) and Kyoto Encyclopedia of Gene and Genome (KEGG) pathway analysis. …”
Publicado 2020
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9255por Chen, Liang, Zhang, Xue, Hu, Chun, Zhang, Yi, Zhang, Lu, Kan, Juntao, Li, Bo, Du, Jun“…Protein-protein interaction, genes cluster, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways analysis were subsequently conducted, and results demonstrated that regulation of serotonergic and GABAergic synapse pathways were dominantly involved in the anxiolytic mechanisms of SZJ extract. …”
Publicado 2020
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9256por Peng, Huiyong, Xiong, Si, Ding, Xiangmei, Tang, Xinyi, Wang, Xuehua, Wang, Li, Liu, Yingzhao“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis demonstrated that abnormally expressed lncRNAs were enriched in the 'NF-kB expression', in the 'TGF-β signaling pathway' and in the 'JAK-STAT signaling pathway', which are associated with the immunopathogenic mechanisms of HT. …”
Publicado 2020
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9257“…Gene ontology (GO) and Kyoto Encyclopedia of Gene and Genome (KEGG) enriched pathways were also performed for annotation and visualization with DEGs. …”
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9258por Li, Ming, Wu, Mingzhu, Qin, Ying, Liu, Huaqing, Tu, Chengcheng, Shen, Bing, Xu, Xiaohong, Chen, Hongbo“…Using biological information technology, including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Cluster of Orthologous Groups of Proteins (COG) databases and analyses, we determined the biological processes associated with these DEPs. …”
Publicado 2020
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9259“…Functional annotation of DEGs via Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis was made with Database for Annotation, Visualization, and Integrated Discovery (DAVID). …”
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9260por Liu, FengZhi, Zhao, Qian, Liu, Suxian, Xu, Yingzhi, Zhou, Dongrui, Gao, Ying, Zhu, Lingqun“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment were analysed by IS-AT common target genes. …”
Publicado 2020
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