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9341por Zhao, Riyang, Han, Chen, Dai, Suli, Wei, Sisi, Xiang, Xiaohan, Wang, Yaojie, Zhao, Ruinian, Zhao, Lianmei, Shan, Baoen“…A few intersecting genes were obtained, and the protein-protein interaction network was visualized using STRING Gene ontology analysis. Kyoto Encyclopedia of Genes and Genomes pathway analyses were performed using R project. …”
Publicado 2021
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9342“…We also used the STRING online database, Cytoscape software, and Database for Annotation, Visualization and Integrated Discovery software for protein–protein interaction network, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses based on the screened DEGs. …”
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9343“…The Gene Ontology (GO) project and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis was used to identify the main biological processes that hub genes participated in. …”
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9344por Jiang, Wenna, Qiao, Lu, Han, Yawei, Zhang, Aimin, An, Haohua, Xiao, Jiawei, Ren, Li“…METHODS: Differentially expressed proteins were detected via nanoliquid chromatography coupled to mass spectrometry (nano-LC-MS/MS). Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment methods were used to find the valine-leucine-isoleucine (BCAA) degradation pathway. …”
Publicado 2021
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9345por Sun, Xi, Zhou, Zhi-Rui, Fang, Yan, Ding, Shuning, Lu, Shuangshuang, Wang, Zheng, Wang, Hui, Chen, Xiaosong, Shen, Kunwei“…A nomogram based on the AJCC stage and risk score could predict OS, and the calibration curves showed good agreement to the actual outcome, indicating that the nomogram may have practical utility. Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analysis indicated that this MGS was primarily enriched in amino acid pathways. …”
Publicado 2021
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9346por Cao, Minkai, Wen, Juan, Bu, Chaozhi, Li, Chunyan, Lin, Yu, Zhang, Hong, Gu, Yanfang, Shi, Zhonghua, Zhang, Yan, Long, Wei, Zhang, Le“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses showed that circRNA parental genes involved in the regulation of metabolic process, trophoblast growth and invasion were significantly enriched, which play important roles in PE development. …”
Publicado 2021
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9347“…The potential molecular mechanism of STIL in osteosarcoma was further explored by Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. RESULTS: Osteosarcoma was associated with higher STIL expression compared to the control samples, and the standardized mean difference (SMD) was 1.52. …”
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9348por Zhou, Xiaowen, Yan, Zhenqian, Wang, Yaxin, Ren, Qi, Liu, Xiaoqi, Fang, Ge, Wang, Bin, Li, Xiantao“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment, as well as network construction, were applied to predict the putative mechanisms of HTJZD in treating hyperlipidemia. …”
Publicado 2021
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9349por Chen, Siyu, Han, Xiaoyu, Yang, Lingling, Li, Qinglun, Shi, Yajuan, Li, Honglian, Chen, Linlin, Sun, Bingjian, Shi, Yan, Yang, Xue“…Gene ontology enrichment analysis showed that they were classified into 35 functional groups, involving three main categories including biological processes (BP), cellular components (CC), and molecular functions (MF). Kyoto Encyclopedia of Genes and Genome (KEGG) analysis indicated the acquired genes were assigned to 49 KEGG pathways. …”
Publicado 2021
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9350por Zhang, Wei, Xu, Mengsi, Wang, Juanjuan, Wang, Shiyin, Wang, Xinhua, Yang, Jingquan, Gao, Lei, Gan, Shangquan“…Gene Ontology (GO) analysis disclosed that 198 DEGs were related to fat metabolism. In Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, the majority of DEGs were significantly enriched in “adipocytokine signaling,” “PPAR signaling,” and “metabolic pathways” (P < 0.05); moreover, some genes were involved in multiple pathways. …”
Publicado 2021
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9351“…METHODS: We identified the overlapping targets of aloe-emodin and colon cancer and performed protein–protein interaction (PPI), Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. …”
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9352“…RStudio plotted the bubble chart of the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analysis of overlapping target proteins. …”
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9353por Sheng, Li-Ping, Han, Chao-Qun, Nie, Chi, Xu, Tao, Zhang, Kun, Li, Xuan-Ji, Xie, Xin-Ru, Lin, Rong, Ding, Zhen“…Further gene ontology (GO) term and Kyoto Encyclopedia of Genomes (KEGG) pathway analyses were performed with plug-in ClueGO in Cytoscape software 3.7.0. …”
Publicado 2021
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9354por Hai, Erhan, Han, Wenjing, Wu, Zhihong, Ma, Rong, Shang, Fangzheng, Wang, Min, Liang, Lili, Rong, Youjun, Pan, Jianfeng, Wang, Zhiying, Wang, Ruijun, Su, Rui, Zhao, Yanhong, Liu, Zhihong, Wang, Zhixin, Li, Jinquan, Zhang, Yanjun“…In this study, differential expression, bioinformatics, and Gene Ontology/Kyoto Encyclopedia of Genes and Genomes enrichment analyses were performed on miRNA expression profiles of Inner Mongolian cashmere goats at 45, 55, and 65 days during the fetal period, and chi-miR-370-3p was identified and investigated further. …”
Publicado 2021
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9355por Qin, Feng, Fan, Qiang, Yu, Peter K. N., Almahi, Waleed Abdelbagi, Kong, Peizhong, Yang, Miaomiao, Cao, Wei, Nie, Lili, Chen, Guodong, Han, Wei“…Enrichment analysis based on Gene Ontology and Kyoto Encyclopedia of Genes and Genomes showed many differently expressed genes were significantly enriched in cell morphology, proliferation, migration, anti-apoptosis, antioxidation, tumor stem cells and energy metabolism and the signaling cascades such as the transforming growth factor-β, Wnt, Hedgehog, vascular endothelial growth factor, retinoic acid-inducible gene I (RIG-I)-like receptor, Toll-like receptor and nucleotide oligomerization domain (NOD)-like receptor were significantly altered in NF639R cells. …”
Publicado 2021
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9356por Wang, Wei, Xu, Shi-wen, Zhu, Xia-yin, Guo, Qun-yi, Zhu, Min, Mao, Xin-li, Chen, Ya-Hong, Li, Shao-wei, Luo, Wen-da“…Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment, and gene set enrichment analyses were performed to identify potentially significant biological processes (BPs) in MM. …”
Publicado 2021
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9357por Wang, Yao, Zou, Junbo, Jia, Yanzhuo, Zhang, Xiaofei, Wang, Changli, Shi, Yajun, Guo, Dongyan, Wu, Zhenfeng, Wang, Fang“…The clusterProfiler package in R language programming of Rstudio software was used to analyze the enrichment of the related targets by Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes (KEGG), and the enriched pathways were reordered according to the “quantity–effect” weight coefficient of the targets they participated in. …”
Publicado 2021
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9358por Wan, Lin, Yang, Guang, Zhang, Shan, Sun, Yulin, Li, Zhichao, Wang, Jing, Shi, Xiuyu, Zou, Liping“…Tax4Fun2 was used to analyze the metabolic pathways utilized by the microflora, and the Kyoto Encyclopedia of Genes and Genomes database was used to analyze differentially expressed genes and pathways. …”
Publicado 2021
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9359por Jin, De, An, Xuedong, Zhang, Yuqing, Zhao, Shenghui, Duan, Liyun, Duan, Yingying, Lian, Fengmei, Tong, Xiaolin“…The findings of Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway annotation suggested that the VEGF, Toll-like 4 receptor, MAPK signaling pathway, and TGF-β1 signaling pathways may be involved in pulmonary fibrosis. …”
Publicado 2021
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9360por Jiao, Hanwei, Shuai, Xuehong, Luo, Yichen, Zhou, Zhixiong, Zhao, Yu, Li, Bowen, Gu, Guojing, Li, Wenjie, Li, Mengjuan, Zeng, Hui, Guo, Xiaoyi, Xiao, Yu, Song, Zhenhui, Gan, Ling, Huang, Qingzhou“…The cis-target genes of lncRNAs were predicted, functional enrichment (Gene Ontology [GO] and Kyoto Encyclopedia of Genes and Genomes [KEGG]) was performed, and 12 lncRNAs with statistically significant different expressions (p ≤ 0.05 and q ≤ 1) were selected for further quantitative real-time reverse transcription (qRT-PCR) validation. …”
Publicado 2021
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