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9501por Zheng, Shuai, Piao, Chunmei, Liu, Yan, Liu, Xuxia, Liu, Tingting, Zhang, Xiaoping, Ren, Jingyuan, Liu, Yulei, Zhu, Baoli, Du, Jie“…Meanwhile, Dorea longicatena, Eubacterium hallii, Clostridium leptum, Faecalibacterium prausnitzii, and some other strains were greatly decreased in the patient group. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis found that ortholog groups and pathways related to glycan biosynthesis and multidrug resistance were significantly increased in the patient group, and some of the hub genes related to N-glycan biosynthesis were increased in the patient group, while those related to TMA precursor metabolism and amino acid metabolism both increased and decreased in the patient group. …”
Publicado 2021
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9502“…METHODS: We identified differentially expressed mRNAs and miRNAs from the Gene Expression Omnibus database using the R package ‘limma’ and analysed the predicted target genes using Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis and Gene Ontology analysis. …”
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9503“…Next, Gene Ontologies (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were performed to explore the relationship between these DEGs. …”
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9504por Zhuang, Zhicheng, Cai, Huajun, Lin, Hexin, Guan, Bingjie, Wu, Yong, Zhang, Yiyi, Liu, Xing, Zhuang, Jinfu, Guan, Guoxian“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicated that the varied prognostic performance between high- and low-risk groups may be related to the immune response mediated by local inflammation. …”
Publicado 2021
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9505“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed. …”
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9506por Chen, Jia, Chen, Yuhan, Du, Xue, Liu, Guojun, Fei, Xiaowei, Peng, Jian Ru, Zhang, Xing, Xiao, Fengjun, Wang, Xue, Yang, Xiao, Feng, Zhichun“…Importantly, pathway analysis integrating Gene Ontology (GO)/Kyoto Encyclopedia of Genes and Genomes (KEGG)/gene set enrichment analysis (GSEA) method indicates that the competing endogenous RNA (ceRNA) network is mainly related to the regulation of GTPase activity (GO: 0043087), extracellular signal-regulated kinase 1 (ERK1) and ERK2 signal cascade (GO: 0070371), chromosome regulation (GO: 0007059), and cell cycle control (GO: 0044770). …”
Publicado 2021
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9507“…All target genes were standardized by Uniprot database, and a total of 291 target genes with their intersection were obtained. Then, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways and biological processes (BPs) of 291 target genes were obtained through the online public platform of DAVID. …”
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9508por Yang, Shuheng, Zheng, Wei, Yang, Chen, Zu, Ruowen, Ran, Shiyu, Wu, Huan, Mu, Mingkun, Sun, Simin, Zhang, Nana, Thorne, Rick F., Guan, Yichun“…DEGs were analyzed using GO and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. …”
Publicado 2021
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9509“…Finally, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were utilized to explore the biological functions of AL122125.1. …”
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9510“…We also investigated the potential molecular mechanisms of IRGs through a bioinformatics approach using Protein-Protein Interaction (PPI) network, Kyoto Encyclopedia of Genes and Genomes (KEGG) database analysis and Gene Ontology (GO) database analysis. …”
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9511“…Furthermore, LinkedOmics was used to identify the genes coexpressed with SMOC1 and to perform Kyoto Encyclopedia of Genes and Genomes pathways and Gene Ontology analysis in low-grade glioma (LGG). …”
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9512por Fan, Guoju, Jin, Zhihai, Wang, Kaiqiang, Yang, Huitang, Wang, Jun, Li, Yankui, Chen, Bo, Zhang, Hongwei“…Gene ontology and Kyoto encyclopedia of genes and genomes pathway enrichment analyses were conducted for the DEGs. …”
Publicado 2021
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9513“…Fecal microbiota and their functional capability were assessed with 16S sequencing and the Kyoto Encyclopedia of Genes and Genomes database, respectively. …”
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9514por Zheng, Yanjun, Bian, Yuehong, Wu, Richao, Chen, Wei, Fu, Linlin, Li, Ping, Wang, Ying, Yang, Xiao, Zhao, Shigang, Shi, Yuhua“…Gene Oncology (GO), Kyoto Encyclopedia Genes and Genomes (KEGG) enrichment analysis were performed. …”
Publicado 2021
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9515por Khan, Ibrar Muhammad, Liu, Hongyu, Zhuang, Jingyi, Khan, Nazir Muhammad, Zhang, Dandan, Chen, Jingmeng, Xu, Tengteng, Avalos, Lourdes Felicidad Córdova, Zhou, Xinqi, Zhang, Yunhai“…The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses revealed that the identified target genes were classified into three broad functional categories, including biological process, cellular component, and molecular function, and were enriched in the lysine degradation, cell cycle, and cell adhesion molecule pathways. …”
Publicado 2021
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9516por Zhang, Huihao, Yao, Sai, Zhang, Zhiguo, Zhou, Chengcong, Fu, Fangda, Bian, Yishan, Luo, Huan, Li, Yan, Yan, Shuxin, Ge, Yuying, Chen, Yuying, Zhan, Kunyu, Ge, Yanzhi, Chen, Zuxiang, Yue, Ming, Li, Xiaofeng, Du, Weibin, Jin, Hongting, Tong, Peijian, Ruan, Hongfeng, Wu, Chengliang“…The protein–protein interaction (PPI) network, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analyses were performed to predict the core targets and pathways of LWDHD against IVDD. …”
Publicado 2021
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9517por Gong, Ke, Zhou, Huiling, Liu, Haidan, Xie, Ting, Luo, Yong, Guo, Hui, Chen, Jinlan, Tan, Zhiping, Yang, Yifeng, Xie, Li“…Venn diagram software was applied to screen differentially expressed genes, and gene ontology functional analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed. …”
Publicado 2021
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9518“…DEGs were analyzed by Gene Ontology function and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis. …”
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9519“…RESULTS: First, we used univariate analysis to identify 35 prognostic genes, which were further demonstrated to be associated with starvation metabolism through Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO). …”
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9520“…Molecular biological processes and signaling pathways were determined via bioinformatic analysis, containing protein-protein interaction (PPI), Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG). Subsequently, the disease-drug-ingredient-targets-pathways networks were constructed using Cytoscape. …”
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