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9521“…The results of Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that these target genes of DEmiRNAs were associated with various biological processes (BPs). …”
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9522por Wang, Dan, Liu, Yicheng, Tang, Dandan, Wei, Shujun, Sun, Jiayi, Ruan, Lvqiang, He, Lin, Li, Ruolan, Ren, Qiang, Tian, Xiaoping, Chen, Yunhui“…By bioinformatics annotation on these key genes, a total of 354 gene ontology (GO) functional annotation analyses and 42 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were obtained. …”
Publicado 2021
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9523por Ma, Pengtao, Wu, Liru, Xu, Yufei, Xu, Hongxing, Zhang, Xu, Wang, Wenrui, Liu, Cheng, Wang, Bo“…To explore the potential regulatory genes of the R gene, 2,973 differentially expressed genes (DEGs) between the parents and bulks were analyzed using gene ontology (GO), clusters of orthologous group (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
Publicado 2021
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9524“…METHODS: We use the known gene disease association data and gene descriptors, such as gene ontology terms (GO), protein interaction data (PPI), PathDIP, Kyoto Encyclopedia of genes and genomes Genes (KEGG), etc, as input for deep learning to predict the association between genes and diseases. …”
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9525por Zhao, Diming, Liu, Yilin, Xu, Zhenqiang, Shen, Hechen, Chen, Shanghao, Zhang, Shijie, Li, Yi, Zhang, Haizhou, Zou, Chengwei, Ma, Xiaochun“…Microarray dataset GSE23959 was screened out for the differentially expressed genes (DEGs), after which the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analyses were carried out using the Metascape. …”
Publicado 2021
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9526por Zhao, Le, Zhou, Lisheng, Hao, Xiaojing, Wang, Lei, Han, Fuhui, Liu, Lirong, Duan, Xinming, Guo, Feng, He, Jianning, Liu, Nan“…Enrichment analysis was performed using Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes. The enriched pathways included lipid transport (GO:0006869), negative regulation of canonical Wnt signaling pathway (GO:0090090), fat digestion and absorption (ko04975), and sphingolipid metabolism (ko00600). …”
Publicado 2021
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9527“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis were performed to divide the DEPs into different metabolic processes and pathways in each cluster. (3) Results: The DEPs in cluster 1 are of the highest abundance in the mycelium and are mainly involved in protein biosynthesis, biosynthesis of cofactors, lipid metabolism, spliceosome, cell cycle regulation, and MAPK signaling pathway. …”
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9528“…Differentially expressed genes (DEGs) between CD47 high and low expression groups were analyzed with R package DESeq2. Kyoto encyclopedia of genes and genomes (KEGG) and Gene Set Enrichment Analysis (GSEA) were utilized to explore how CD47 affect the immune related cell signaling pathway. …”
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9529“…Gene Ontology (GO) function and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis were performed using the Database for Annotation, Visualization and Integrated Discovery. …”
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9530“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were used to explore the potential regulatory mechanism of hub genes in HCC. …”
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9531“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis were conducted using the DAVID database. …”
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9532por Jiang, Xiujie, Xu, Qingpeng, Zhang, Aiwu, Liu, Yong, Li, Zhijiang, Tang, Huacheng, Cao, Dongmei, Zhang, Dongjie“…According to the Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis, this was found to be correlated with nine significantly enriched metabolic pathways involving the up-regulation of levels of L-serine, SM (d18:1/22:1(13Z)), L-histidine, creatine, and 3-indoleacetic acid. …”
Publicado 2021
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9533por Xia, Ming, Liu, Di, Liu, Haiyang, Zhao, Juanyong, Tang, Chengyuan, Chen, Guochun, Liu, Yu, Liu, Hong“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were performed to determine the predominant molecular mechanisms and pathways of TwHF on the treatment of IgAN. …”
Publicado 2021
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9534por Tang, Yuanjun, Shi, Chenyang, Qin, Yingyi, Wang, Shuowen, Pan, Hui, Chen, Ming, Yu, Xuemei, Lou, Yuefen, Fan, Guorong“…The mechanism of colchicine in the treatment of MIRI was determined by protein-protein interaction (PPI), gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
Publicado 2021
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9535“…Transmission electron microscopy was performed to assess the autophagy levels upon ATF4 silencing. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and gene set enrichment analysis (GSEA) were used to determine gene enrichment. …”
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9536por Manokawinchoke, Jeeranan, Limraksasin, Phoonsuk, Okawa, Hiroko, Pavasant, Prasit, Egusa, Hiroshi, Osathanon, Thanaphum“…Topology-based analysis demonstrated that ICF induced genes in cell cycle categories and downregulated genes associated with metabolic processes. The Kyoto Encyclopedia of Genes and Genomes database revealed differentially regulated genes related to the p53 signaling pathway and cell cycle. qPCR analysis demonstrated significant upregulation of Ccnd1, Cdk6 and Ccng1. …”
Publicado 2022
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9537por Rivera Pérez, Carmen Alicia, Janz, Dennis, Schneider, Dominik, Daniel, Rolf, Polle, Andrea“…The fungal metatranscriptome covered Kyoto Encyclopedia of Genes and Genomes (KEGG) and Eukaryotic Orthologous Groups (KOG) categories similar to those of model fungi and did not reveal significant changes related to N metabolization but revealed species-specific transcription patterns, supporting trait stability. …”
Publicado 2022
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9538por Zhong, Tingting, Jiang, Zeying, Wang, Xiangdong, Wang, Honglei, Song, Meiyi, Chen, Wenfang, Yang, Shicong“…The co-expressed DEGs were investigated using Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis, and hub genes were determined based on the protein-protein interaction network established by STRING. …”
Publicado 2022
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9539por Zhu, Yi-Wei, Li, Du, Ye, Ting-Jie, Qiu, Feng-Jun, Wang, Xiao-Ling, Yan, Xiao-Feng, Lu, Yan-Lin, Xu, Wei, Li, Hua, Hu, Xu-Dong“…The molecular mechanism of YCHT on prevention and treatment of mice AFLD was investigated according to the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of the differential expression genes data obtained by liver tissue RNA-Seq. …”
Publicado 2021
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9540por Gao, Qian, Zhang, Wenjun, Li, Tingting, Yang, Guojun, Zhu, Wei, Chen, Naijun, Jin, Huawei“…Module identification, gene ontology (GO) analysis and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis were carried out respectively. …”
Publicado 2022
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