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9561“…Gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) analysis were carried out to annotate the function of key genes. …”
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9562por Wang, Yuan-Yuan, Shi, Lin-Yang, Xu, Ming-Hao, Jing, Yu, Sun, Cui-Cui, Yang, Jia-Hui, Wang, Ruo-Nan, Sheng, Ning-Ning, Zhang, Ca-Fa, Zhang, Li, Zhu, Zhi-Tu, Wang, Qing-Jun“…Furthermore, Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted to examine the role of these GSDM genes in various cancers. …”
Publicado 2021
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9563por Liu, Chunliang, Chen, Yu, Deng, Yuqi, Dong, Yu, Jiang, Jixuan, Chen, Si, Kang, Wenfeng, Deng, Jiong, Sun, Haipeng“…The genes significantly correlated with survival were used to perform gene ontology (GO) and Kyoto encyclopedia of genes and genomes (KEGG) analysis; next, these genes were used to construct a protein-protein interaction network. …”
Publicado 2019
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9564“…Bioinformatics tools, such as R, Cytoscape, and Perl, were used to analyze the Gene Ontology (GO) enrichment, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, protein-protein interaction (PPI) network, and regulatory network. …”
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9565por Qi, Qi, Huang, Wuhao, Zhang, Hua, Zhang, Bin, Sun, Xiaoyan, Ma, Jun, Zhu, Chaonan, Wang, Changli“…The enrichment analysis of the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway showed that the functions of the PLODs focused on cell cycle, DNA replication, and glycolysis/gluconeogenesis in LUAD. …”
Publicado 2021
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9566“…RESULTS: The patterns of relative abundance of all bacteria isolated from stool samples before or after chemotherapy treatment appeared to be different, but there were no significant differences in the Kyoto Encyclopedia of Genes and Genomes (KEGG) metabolism pathway between the two groups. …”
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9567“…Gene ontology (GO) analysis was performed to identify the biologic implications of the DEGs. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis was performed to identify biologically important pathways associated with the DEGs. …”
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9568por Wei, Ling, An, Tao, An, Yunhe, He, Zheng, Jia, Tingting, Li, Baoming, Lun, Yongzhi“…They were enriched in the signal pathways of tumor transcription and cell cycle by Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis; there were 6 classical tumor signaling pathways (P<0.001): MAPK, apoptosis, tumor necrosis factor (TNF), cell cycle, p53, and transcriptional misregulation in cancer. …”
Publicado 2021
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9569por Chu, Xiao-Dong, Zhang, Yi-Ran, Lin, Zheng-Bin, Zhao, Zhan, Huangfu, Shu-Chen, Qiu, Sheng-Hui, Guo, Yan-Guan, Ding, Hui, Huang, Ting, Chu, Xiao-Li, Pan, Jing-Hua, Pan, Yun-Long“…After visualization of the compound-disease network and protein-protein interaction (PPI) network, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of the overlapping genes were performed. …”
Publicado 2021
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9570“…Based on this, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were used to perform functional and pathway enrichment analysis. …”
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9571“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) biological pathway analyses were performed to predict the functions of dysregulated genes. …”
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9572“…Significantly differentially expressed genes (DEGs) from comparing high hip and low hip low bone mineral density (BMD) groups in the first dataset were identified for Gene Ontology (GO), Gene set enrichment analysis (GSEA) and Kyoto encyclopedia of genes and genomes (KEGG) to investigate the discrepantly enriched biological processes between high hip and low hip group. …”
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9573por Zhang, Weifeng, Wang, Ting, Guo, Ruixue, Cui, Wen, Yu, Wei, Wang, Zhihui, Jiang, Yumin, Jiang, Minghan, Wang, Xiaojie, Liu, Chao, Xiao, Jing, Shang, Jin, Wen, Xuejun, Zhao, Zhanzheng“…We constructed Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway profiles using Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) to identify variations between the different groups. …”
Publicado 2022
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9574por Chen, Min, Zheng, Rui, Li, Fei, Xin, Jun‐Yi, Chen, Si‐Lu, Zhu, Xin‐Jie, Gu, Xiang, Dai, Meng‐Di, Yang, Yi‐Fan, Chu, Hai‐Yan, Zhang, Zheng‐Dong, Lu, Mei‐Ping, Cheng, Lei“…METHODS: Forty‐three key genes in the Hippo pathway were selected from the Kyoto Encyclopedia of Genes and Genomes (KEGG), Reactome pathway database, and previous reported studies. …”
Publicado 2021
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9575“…Abbreviations: AFP, Alpha-fetoprotein; CCL14, C-C motif chemokine ligand 14; CK19, Cytokeratin 19; CI, coefficient interval; COL1A1, Collagen 1A1; DFS, Disease-free Survival; EWSR1, Ewing Sarcoma breakpoint region 1/EWS RNA binding protein 1; FLI1, Friend leukemia virus integration 1; GEO, Gene Expression Omnibus; GO, Gene Ontology; HCC, Hepatocellular carcinoma; HR, Hazard ratio; KEGG, Kyoto Encyclopedia of Genes and Genomes; mRNA, messenger Ribonucleic Acid; N, nodule; OS, Overall survival; PPI, Protein-Protein Interaction analysis; RNA, Ribonucleic Acid; SD, Standard Deviation; TCGA, The Cancer Genome Atlas; T, tumor; TNM, tumor-nodule-metastasis.…”
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9576“…Abbreviations: m(6)A: N(6)-methyladenosine; ccRCC: clear cell renal cell carcinoma; DEGs: differentially expressed genes; NUF2: NUF2 component of NDC80 kinetochore complex; CDCA3: cell division cycle associated 3; CKAP2L: cytoskeleton associated protein 2 like; KIF14: kinesin family member 14; ASPM: assembly factor for spindle microtubules; METTL14: methyltransferase 14; OS: overall survival; FPKM: fragments per kilobase million; GEO: gene expression omnibus; TCGA: the Cancer Genome Atlas; RMA: robust multi-array average expression measure; WGCNA: weighted gene co-expression network analysis; GO: gene ontology; KEGG: kyoto encyclopedia of genes and genomes; ROC: receiver operating characteristic curve; AUC: area under the curve; RIP: RNA immunoprecipitation; qPCR: real-time quantitative PCR.…”
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9577por Deng, Min, Sun, Shiquan, Zhao, Rongce, Guan, Renguo, Zhang, Zhen, Li, Shaohua, Wei, Wei, Guo, Rongping“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses showed that immune-related high-risk groups were rich in genes and had reduced immune status. …”
Publicado 2022
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9578“…Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, and protein–protein interaction (PPI) analysis were performed to explore the roles of DEGs. …”
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9579por Zhang, Nanfeng, Qian, Tingting, Sun, Shan, Cao, Wei, Wang, Zhixian, Liu, Danling, Li, Peifan, Wu, Jingfang, Li, Huawei, Yang, Jianming“…The severity of OME was determined with an oto-endoscope, by histochemical analysis, and by acoustic immittance. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of RNA-sequencing (RNA-seq) data was carried out to analyze the signaling pathways related to the pathogenesis of OME, which indicated that IL-17 is involved in OME. …”
Publicado 2022
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9580por Luo, Weikang, Yang, Zhaoyu, Zhang, Wei, Zhou, Dan, Guo, Xiaohang, Wang, Shunshun, He, Feng, Wang, Yang“…Then, using the gene ontology (GO), Kyoto encyclopedia of genes and genomes (KEGG), and protein–protein interaction (PPI), the shared and stage-specific differentially expressed proteins (DEPs) were screened, analyzed, and visualized. …”
Publicado 2022
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