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9661“…The results of gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) pathway analyses of the KDM5 family and its 800 co-expressed genes showed that many gene terms related to cell proliferation, migration and many carcinogenic pathways. …”
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9662“…Subsequently, Gene Ontology (GO) biological process (BP) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to explore the principal functions of the significant DEGs. …”
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9663por Wu, Rong, Dou, Xiaojie, Li, Haidong, Sun, Zhenguo, Li, Heng, Shen, Yuxin, Weng, Wei, Min, Jikang“…Single-cell transcriptomic analysis of osteosarcoma tissues was performed by using the Seurat R package, the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis of differentially expressed genes was performed by using the clusterProfiler R package, and the cell–cell interaction analysis was performed by using the CellPhoneDB package. …”
Publicado 2022
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9664por Han, Zhaodong, Mo, Rujun, Cai, Shanghua, Feng, Yuanfa, Tang, Zhenfeng, Ye, Jianheng, Liu, Ren, Cai, Zhiduan, Zhu, Xuejin, Deng, Yulin, Zou, Zhihao, Wu, Yongding, Cai, Zhouda, Liang, Yuxiang, Zhong, Weide“…In this study, The Cancer Genome Atlas (TCGA), Kaplan–Meier Plotter, Metascape, the Kyoto Encyclopedia of Genes and Genomes (KEGG), CIBERSORT, and cBioPortal and bioinformatic analysis were used to investigate E2Fs in patients with PCa. …”
Publicado 2022
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9665por Cheng, Yuan, Kou, Fushun, Zhang, Xiaosi, Dai, Yi, Shi, Lei, Xie, Chune, Li, Xiaohong, Li, Junxiang“…Then, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed. …”
Publicado 2022
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9666por Liu, Xin-Yuan, Zhang, Tian-Qi, Zhang, Qi, Guo, Jing, Zhang, Peng, Mao, Tao, Tian, Zi-Bin, Zhang, Cui-Ping, Li, Xiao-Yu“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes databases were used to explore the functions of target mRNAs of differentially expressed lncRNAs. …”
Publicado 2022
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9667“…R software was used to screen differentially expressed genes (DEGs), Gene Ontology (GO) functional enrichment, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
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9668por Liu, Wen-Chao, Pan, Zi-Yi, Zhao, Yue, Guo, Yan, Qiu, Sheng-Jian, Balasubramanian, Balamuralikrishnan, Jha, Rajesh“…Cecal metabolomics analysis indicated 19 differential metabolites between the two groups (p < 0.10, VIP >1). The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that the differential metabolites mainly enriched in 10 signaling pathways such as the Citrate cycle (TCA cycle) (p < 0.01). …”
Publicado 2022
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9669“…Differentially expressed genes (DEGs) were identified, and the Database for Annotation, Visualization, and Integrated Discovery (DAVID) was used for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses. …”
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9670por Wang, Zhijun, Li, Yanjun, Zhu, Qianhao, Tian, Liwen, Liu, Feng, Zhang, Xinyu, Sun, Jie“…Genes differentially expressed between the MC and mock treatments of XLZ74 (6252) and SD1068 (6163) were subjected to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses to compare the enriched GO terms and KEGG pathways between the two varieties. …”
Publicado 2022
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9671por Zhao, Hong, Wu, Yawei, Shen, Luonan, Hou, Qiandong, Wu, Rongju, Li, Zhengchun, Deng, Lin, Wen, Xiaopeng“…Furthermore, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that the processes of photosynthesis, plant hormone signal transduction, and MAPK signaling pathway were affected in the low−Pi response. …”
Publicado 2022
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9672“…The pan-cancer analysis was mainly focused on the expression patterns, prognostic values, mutation landscapes, biological pathways, tumor microenvironment remodeling, and therapeutic resistance of UBE2S using multiple databases including cBioPortal, Cancer Cell Line Encyclopedia (CCLE) database, Tumor Immune Estimation Resource (TIMER), and Gene Expression Profiling Interactive Analysis (GEPIA). …”
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9673por Ren, Xilin, Liu, Jinlei, Ndandala, Charles Brighton, Li, Xiaomeng, Guo, Yuwen, Li, Guangli, Chen, Huapu“…According to the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) pathway analyses, these pathways and the typical genes involved can be divided into cellular processes, environmental information processing, genetic information processing, diseases, metabolism and organismal systems. …”
Publicado 2022
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9674por Li, Dan, Zhang, Hao, Wu, Xueqin, Dai, Qing, Tang, Shiqi, Liu, Yan, Yang, Shikun, Zhang, Wei“…Gene Ontology analysis for target genes of the tRFs/tiRNAs showed that the most enriched cell components, molecular functions and biological processes were Golgi apparatus, cytoplasmic vesicles, protein binding, cellular protein localization and multicellular organism development. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that these target genes were mainly involved in the natural killer cell mediated cytotoxicity pathway, citrate cycle, and regulation of actin cytoskeleton signaling pathway. …”
Publicado 2022
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9675por Li, Bin, Li, Suchun, Fan, Yuting, Diao, Hui, Ye, Siyang, Peng, Huajing, Chen, Wei“…First, the differentially expressed genes (DEGs) were identified and subjected to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses. …”
Publicado 2022
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9676RNA-Seq analysis of duck embryo fibroblast cells gene expression during duck Tembusu virus infectionpor Pan, Yuhong, Wu, Xuedong, Cai, Wenjun, Cheng, Anchun, Wang, Mingshu, Chen, Shun, Huang, Juan, Yang, Qiao, Wu, Ying, Sun, Di, Mao, Sai, Zhu, Dekang, Liu, Mafeng, Zhao, Xinxin, Zhang, Shaqiu, Gao, Qun, Ou, Xumin, Tian, Bin, Yin, Zhongqiong, Jia, Renyong“…Gene Ontology (GO) category and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis revealed that these DEG were associated with multiple biological functions, including signal transduction, host immunity, virus infection, cell apoptosis, cell proliferation, and pathogenicity-related and metabolic process signaling pathways. …”
Publicado 2022
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9677por He, Jing, Xie, Liang, Yu, Li, Liu, Lijun, Xu, Hong, Wang, Tao, Gao, Yuyang, Wang, Xuedong, Duan, You, Liu, Hanmin, Dai, Li“…With Gene Ontology, Kyoto Encyclopedia of Genes and Genomes pathway enrichment, and protein–protein interaction analyses, most of the DEPs were clustered in pathways related to B cell-mediated immune responses, complement activation, and phagocytosis. …”
Publicado 2022
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9678“…The potential antisense, cis and trans targets of lncRNAs were predicted. Kyoto Encyclopedia of Genes and Genomes enrichment analysis showed that many target genes were involved in proteasome, linoleic acid metabolism and retinol metabolism under cold acclimation. …”
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9679por lv, Yue, Yuan, Chun-hui, Han, Lu-yao, Huang, Gao-ru, Ju, Ling-ce, Chen, Ling-hui, Han, Hai-ying, Zhang, Chong, Zeng, Ling-hui“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of SLC25A13 coexpressed genes showed that these genes are enriched in ATPase activity, cell cycle, mTOR, and VEGFA-VEGFR2 signaling pathways, which were relevant to tumor development and angiogenesis. …”
Publicado 2022
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9680por Meng, Qingwen, Liu, Huajiang, Wu, Haolin, shun, Ding, Tang, Chaoling, Fu, Xinyin, Fang, Xingyue, Xu, Yiqian, Chen, Bocen, Xie, Yiqiang, Liu, Qibing“…Furthermore, the DAVID database was utilized for the enrichment analysis on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). To validate these results, a cell model of CHD was established in EAhy926 cells using oxidized low-density lipoprotein (ox-LDL). …”
Publicado 2022
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