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981“…The Gene Ontology and Kyoto Encyclopedia of Genes and Genomes were used for pathway enrichment analysis. …”
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982por Pang, Tingting, Liu, Chang, Yao, Junjie, Li, Jiahui, Li, Zhongxu, Lou, Huijuan, Lei, Siyuan, Zhang, Jiangchun, Dong, Li, Wang, Yufeng“…At the same time, the intersecting targets were imported into the Search Tool for the Retrieval of Interaction Gene/Proteins database to build a protein-protein interaction network and to screen the core targets; the intersecting targets were visualized by using the Database for Annotation, Visualization and Integrated Discovery 6.8 database for gene ontology functional analysis and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and construct the “active ingredient-target-pathway” network. …”
Publicado 2022
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983por Huang, Xing, Feng, Yipeng, Ma, Dawei, Ding, Hanlin, Dong, Gaochao, Chen, Yan, Huang, Xiaochen, Zhang, Jingyuan, Xu, Xinyu, Chen, Chen“…Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Kyoto Encyclopedia of Genes and Genomes (GSEA) pathway analyses showed that glycoprotein-related, cell cycle, and P53 pathways displayed the most significant changes during progression. …”
Publicado 2022
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984por Xu, Xiaoyu, Wang, Linshuang, Chen, Qian, Wang, Zikang, Pan, Xun, Peng, Xike, Wang, Miao, Wei, Dongfeng, Li, Yanping, Wu, Bin“…Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes analyses characterized potential targets' biological functions and pathways. …”
Publicado 2022
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985por He, Sheng, He, Lili, Yan, Fangran, Li, Junda, Liao, Xiaoting, Ling, Maoyao, Jing, Ren, Pan, Linghui“…Gene Ontology (GO) and Kyoto Encyclopedia of Genomes (KEGG) and gene set enrichment analysis (GSEA) were performed using the differentially expressed genes. …”
Publicado 2022
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986por Gai, Jialin, Xing, Jinxiao, Wang, Yangyang, Lei, Junfang, Zhang, Chengdong, Zhang, Jinfei, Tang, Jiqin“…We used Metascape platform to perform gene ontology (GO) functional enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis, and used Chem draw, Pymol, AutoDock 1.5.6 software for molecular docking verification with core targets. …”
Publicado 2022
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987“…The hub targets were transmitted to Database for Annotation, Visualization and Integrated Discovery for gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Finally, AutoDock Vina and MglTools were employed for molecular docking validation. …”
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988por Li, Ming-han, Jin, Ming-hui, Hu, Rui-yi, Tang, Shan, Li, Ke-ke, Gong, Xiao-Jie, Sun, Yin-shi, Wang, Ying-ping, Wang, Zi, Li, Wei“…Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment analyses were performed by using the R language. …”
Publicado 2023
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989“…Additionally, gene ontology and kyoto encyclopedia of genes and genomes analyses were performed to analyze the biological functions and pathways for the target of mRNAs. …”
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990“…Gene Ontology (GO) terms, Kyoto Encyclopedia of Genes and Genomes (KEGG) and BioCatar pathway enrichment were conducted with Enrichr platform, “ssgsea” and “ggplot2” package of RStudio. …”
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991“…This is the article "Geneva" of the Encyclopedia de Diderot and d'Alembert. In August 1756, during his stay in Geneva, Voltaire stayed in a property called Les Délices, many visitors including d'Alembert were involved in writing this article. …”
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992“…The book should serve as an encyclopedia on the construction of Lyapunov functionals in analyzing solutions of dynamical systems on time scales. …”
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993por Gardner, Paul P., Daub, Jennifer, Tate, John, Moore, Benjamin L., Osuch, Isabelle H., Griffiths-Jones, Sam, Finn, Robert D., Nawrocki, Eric P., Kolbe, Diana L., Eddy, Sean R., Bateman, Alex“…In this contribution, we discuss the pros and cons of using the online encyclopedia, Wikipedia, as a source of community-derived annotation. …”
Publicado 2011
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994por Lucas-Elío, Patricia, Goodwin, Lynne, Woyke, Tanja, Pitluck, Sam, Nolan, Matt, Kyrpides, Nikos C., Detter, Janine C., Copeland, Alex, Teshima, Hazuki, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Shunsheng, Land, Miriam L., Ivanova, Natalia, Mikhailova, Natalia, Johnston, Andrew W. B., Sanchez-Amat, Antonio“…The 4,684,316 bp long genome harbors 4,228 protein-coding genes and 98 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.…”
Publicado 2012
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995“…A decade-long project, led by several international research groups, called the Encyclopedia of DNA Elements (ENCODE), recently released an unprecedented amount of data. …”
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996“…Recently, the Encyclopedia of DNA Elements (ENCODE) Analysis Working Group converted data from ChIP-seq analyses from the Broad Histone track into 15 corresponding chromatic maps that label sequences with different kinds of histone modifications in promoter regions. …”
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997“…We applied our methodology to the drug sensitivity prediction problem on synthetic and cancer cell line encyclopedia dataset and illustrated that tree weights can be selected to reduce the average length of the CI without increase in mean error.…”
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998“…The present review summarizes the current knowledge of histone modifications of the BDNF gene in neuronal diseases, as well as the developmental regulation of the BDNF gene based on data from the Encyclopedia of DNA Elements (ENCODE).…”
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999por Sakurai, Tetsuya, Satou, Masakazu, Akiyama, Kenji, Iida, Kei, Seki, Motoaki, Kuromori, Takashi, Ito, Takuya, Konagaya, Akihiko, Toyoda, Tetsuro, Shinozaki, Kazuo“…The RIKEN Arabidopsis Genome Encyclopedia (RARGE) database houses information on biological resources ranging from transcriptome to phenome, including RIKEN Arabidopsis full-length (RAFL) complementary DNAs (cDNAs), their promoter regions, Dissociation (Ds) transposon-tagged lines and expression data from microarray experiments. …”
Publicado 2005
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