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11021por Sun, Zepang, Chen, Hao, Han, Zhen, Huang, Weicai, Hu, Yanfeng, Zhao, Mingli, Lin, Tian, Yu, Jiang, Liu, Hao, Jiang, Yuming, Li, Guoxin“…Finally, Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were also performed to describe the function of this genome-wide network. …”
Publicado 2020
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11022“…Gene ontology (GO) category and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses showed that the copositive correlation genes were primarily enriched in the mitotic process and cell cycle. …”
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11023por Ou, Yu-hua, Liu, Yu-kun, Zhu, Li-qiong, Chen, Man-qi, Yi, Xiao-chun, Chen, Hui, Zhang, Jian-ping“…LncRNA microarray was used to analyze the differentially expressed lncRNAs and mRNAs. Kyoto Encyclopedia of Genes and Genomes (KEGG) was used to analyze the main enrichment pathways of differentially expressed mRNAs. …”
Publicado 2020
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11024por Wu, Shuxian, Zhang, Jingru, Liu, Binghua, Huang, Yajuan, Li, Siping, Wen, Haishen, Zhang, Meizhao, Li, Jifang, Li, Yun, He, Feng“…Based on these relationships, functional annotation of the related lncRNAs was performed by gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. …”
Publicado 2020
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11025por Wang, Aili, Chao, Tianle, Ji, Zhibin, Xuan, Rong, Liu, Shuang, Guo, Maosen, Wang, Guizhi, Wang, Jianmin“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicated that most of the DEGs were enriched in immune- related GO terms and pathways. …”
Publicado 2020
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11026por Pei, Jinli, Xiao, Zhengpan, Guo, Ziyi, Pei, Yechun, Wei, Shuangshuang, Wu, Hao, Wang, Dayong“…Furthermore, the enriched processes in the domain of cellular components (CC) were cell and cell parts. The Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis showed that the most significant pathways that have been altered included the PI3K-Akt and MAPK signaling pathways. …”
Publicado 2020
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11027por Laulajainen‐Hongisto, Anu, Lyly, Annina, Hanif, Tanzeela, Dhaygude, Kishor, Kankainen, Matti, Renkonen, Risto, Donner, Kati, Mattila, Pirkko, Jartti, Tuomas, Bousquet, Jean, Kauppi, Paula, Toppila‐Salmi, Sanna“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation analyses were performed, and 19 functional protein categories were found as significantly (p < 0.05) enriched among these genes. …”
Publicado 2020
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11028por Dai, Hanying, Guo, Lihuang, Lin, Mingyue, Cheng, Zhenbo, Li, Jiancheng, Tang, Jinxia, Huan, Xisha, Huang, Yue, Xu, Keqian“…Subsequently, we analyzed the gene ontology (GO) function and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway of the DEGs, and constructed a protein-protein interaction (PPI) network. …”
Publicado 2020
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11029“…Differentially expressed genes (DEGs) were identified by integrated bioinformatics analysis, including protein–protein interaction (PPI) network, Gene Ontology (GO) enrichment, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses. …”
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11030por Lu, Suying, Sun, Chengtao, Chen, Huimou, Zhang, Chao, Li, Wei, Wu, Liuhong, Zhu, Jia, Sun, Feifei, Huang, Junting, Wang, Juan, Zhen, Zijun, Cai, Ruiqing, Sun, Xiaofei, Zhang, Yizhuo, Zhang, Xing“…We screened for pathaffy package enrichment of DEGs by the Kyoto Encyclopedia of Genes and Genomes (KEGG). The cutoff criterion was a P-value <0.05. …”
Publicado 2020
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11031por Zhang, Bing, Chu, Wei, Wen, Feifei, Zhang, Li, Sun, Lixia, Hu, Baoguang, Wang, Jingjing, Su, Qingguo, Mei, Yanhui, Cao, Jingyuan, Zheng, Jing, Mou, Xiaodong, Dong, Hongliang, Lin, Xiaoyan, Wang, Nan, Ji, Hong“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway-based approaches were used to investigate biological function and signaling pathways mediated by the differentially expressed mRNAs. …”
Publicado 2020
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11032“…The functional categories of the differentially expressed genes (DEGs) by gene ontology (GO) revealed that the transcripts involved in the oxidation–reduction process, oxidoreductase activity, glutathione peroxidase activity, and cell redox homeostasis were the considerable enrichments between Cd stress and NaHS treatment under Cd stress. Kyoto Encyclopedia of Genes and Genomes (KEGG) indicated that the carbon metabolism, glutathione metabolism, metabolism of xenobiotics by cytochrome P450, and ABC transporters were significantly differentially expressed components between Cd stress and NaHS treatment under Cd stress in T. thermophila. …”
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11033“…The genes in the module related to SONFH and the DEGs were extracted for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
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11034por Chen, Chong, Pan, Yundi, Bai, Lipeng, Chen, Huilin, Duan, Zhaojun, Si, Qin, Zhu, Ruizhe, Chuang, Tsung-Hsien, Luo, Yunping“…METHOD: The copy number variations (CNVs) of MIR3613 from Cancer Genome Atlas (TCGA) or Cancer Cell Line Encyclopedia (CCLE) were analyzed, and its correlation with breast cancer subtypes or prognosis was investigated. …”
Publicado 2021
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11035por Dong, Yang, Hao, Lin, Fang, Kun, Han, Xiao-xiao, Yu, Hui, Zhang, Jian-jun, Cai, Long-jun, Fan, Tao, Zhang, Wen-da, Pang, Kun, Ma, Wei-ming, Wang, Xi-tao, Han, Cong-hui“…In addition, ingredient-target (I–T) and protein–protein interaction (PPI) networks were constructed using STRING and Cytoscape, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted, and then the pathways directly related to BC were integrated manually to reveal the pharmacological mechanism underlying S. nigrum-medicated therapeutic effects in BC. …”
Publicado 2021
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11036“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes, Genomes (KEGG) pathway and protein-protein interaction network (PPI) analyses revealed the role of these genes and information on related pathways. …”
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11037por Hu, Tengfei, Luo, Shaoge, Xi, Yu, Tu, Xuchong, Yang, Xiaojian, Zhang, Hui, Feng, Jiarong, Wang, Chunlin, Zhang, Yan“…For the functional annotation of common DEGs, DAVID v.6.8 was used to perform Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. …”
Publicado 2021
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11038“…After that, overlapping genes were subjected to Gene Ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis. …”
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11039por Wu, Chaohui, Yang, Jiansheng, Li, Rongbin, Lin, Xianbin, Wu, Jiayun, Wu, Jingyang“…RESULTS: Visibly downregulated WT1-AS in NSCLC cell lines was obtained from Broad Institute Cancer Cell Line Encyclopedia (CCLE) database and further verified by performing RT-qPCR. …”
Publicado 2021
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11040“…The GSE117261 dataset was adopted to screen DEGs between IPAH and the control groups with the criterion of |log2 fold change| ≥ 1, adjusted P < 0.05, and to further explore their potential biological functions via Gene Ontology analysis, Kyoto Encyclopedia of Genes and Genomes Pathway analysis, and Gene Set Enrichment Analysis. …”
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