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11661por Zhang, Xueqin, Chao, Peng, Zhang, Lei, Xu, Lin, Cui, Xinyue, Wang, Shanshan, Wusiman, Miiriban, Jiang, Hong, Lu, Chen“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) datasets were applied to define the enrichment of each term. …”
Publicado 2023
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11662“…Next, we screened differentially expressed lncRNAs (DElncRNAs) between patients and healthy subjects, constructed a ceRNA network using the StarBase database and screened ferroptosis–related genes from the predicted target mRNAs for Disease Ontology (DO), Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses. …”
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11663por Shi, Rui, Li, Haojia, Wei, Sitian, Yu, Zhicheng, Zhang, Jun, Zhang, Qi, Zhou, Ting, Yao, Yuwei, Zhang, Qian, Zhang, Tangansu, Wang, Hongbo“…Gene ontology (GO) enrichment analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway functional analysis between the high and low-risk groups were performed. …”
Publicado 2023
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11664“…The metabolite quantification ions were optimized to avoid the interference of quantification ion peak accumulation in the case of similar peak times, and a selected ion monitoring (SIM) method table was constructed for 611 metabolites, covering 65% of the metabolic pathways in the KEGG (Kyoto Encyclopedia of Genes and Genomes). The developed method covered 39 pathways, including glycolysis, the tricarboxylic acid cycle, purine metabolism, pyrimidine metabolism, amino acid metabolism, and biosynthesis. …”
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11665“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichments of DEGs were performed. …”
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11666“…Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were used for enrichment analysis to elucidate underlying mechanisms. …”
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11667por Talia, Marianna, Cirillo, Francesca, Spinelli, Asia, Zicarelli, Azzurra, Scordamaglia, Domenica, Muglia, Lucia, De Rosis, Salvatore, Rigiracciolo, Damiano Cosimo, Filippelli, Gianfranco, Perrotta, Ida Daniela, Davoli, Mariano, De Rosa, Rosanna, Macirella, Rachele, Brunelli, Elvira, Miglietta, Anna Maria, Nardo, Bruno, Tosoni, Daniela, Pece, Salvatore, De Francesco, Ernestina Marianna, Belfiore, Antonino, Maggiolini, Marcello, Lappano, Rosamaria“…Thereafter, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses allowed the prediction of potential functions of differentially expressed genes (DEGs). …”
Publicado 2023
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11668por Chai, Jin-Lian, Lu, Bo-Wen, Du, Hai-Tao, Wen, Ming-Tao, Liang, Xue-Zhen, Wang, Ping“…In addition, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses of the pyroptosis-related differentially expressed genes involved in SONFH were conducted by “clusterProfiler” R package and visualized by “GOplot” R package. …”
Publicado 2023
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11669“…Ferroptosis-related genes were gathered through Gene Set Enrichment Analysis (GSEA), Kyoto Encyclopedia of Genes and Genomes (KEGG), and relevant literature, resulting in a total of 88 related genes. …”
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11670por Jo, Jae-Hyun, Park, Jong-Uk, Kim, Yeong-Mu, Ok, Seon-Mi, Kim, Dong-Kyu, Jung, Dong-Hyun, Kim, Hye-Ji, Seong, Hyun-A, Cho, Hyo Je, Nah, Jihoon, Kim, Sangjune, Fu, Haiqing, Redon, Christophe E., Aladjem, Mirit I., Jang, Sang-Min“…Correlation between RepID and DAB2 expression was examined in the Cancer Cell Line Encyclopedia (CCLE) through the CellMinerCDB portal. …”
Publicado 2023
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11671por Shuyuan, Yin, Meimei, Wang, Fenghua, Li, Huishan, Zhao, Min, Chu, Hongchu, Bao, Xuemei, Liu“…Thereafter, a Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to predict the related biological functions. …”
Publicado 2023
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11672por Sang, Min Kyu, Patnaik, Hongray Howrelia, Park, Jie Eun, Song, Dae Kwon, Jeong, Jun Yang, Hong, Chan Eui, Kim, Yong Tae, Shin, Hyeon Jun, Ziwei, Liu, Hwang, Hee Ju, Park, So Young, Kang, Se Won, Park, Seung-Hwan, Cha, Sung-Jae, Ko, Jung Ho, Shin, E. Hyun, Park, Hong Seog, Jo, Yong Hun, Han, Yeon Soo, Patnaik, Bharat Bhusan, Lee, Yong Seok“…The unigenes were also mapped to the EuKaryotic Orthologous Groups (KOG), Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) specializations. …”
Publicado 2023
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11673por Wang, Yazhuo, Xu, Yang, Tan, Jingrui, Ye, Jiaxue, Cui, Weizhen, Hou, Jie, Liu, Peiyu, Li, Jianwei, Wang, Shiyuan, Zhao, Qingyang“…Subsequently, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed. …”
Publicado 2023
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11674por Liu, Tonghu, Ren, Yilin, Wang, Qixin, Wang, Yu, Li, Zhiyuan, Sun, Weibo, Fan, Dandan, Luan, Yongkun, Gao, Yukui, Yan, Zechen“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses and the LinkedOmics database were used to analyse the functions of SLC7A11-associated genes. …”
Publicado 2023
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11675por Bustos, Matias A., Yokoe, Takamichi, Shoji, Yoshiaki, Kobayashi, Yuta, Mizuno, Shodai, Murakami, Tomohiro, Zhang, Xiaoqing, Sekhar, Sreeja C., Kim, SooMin, Ryu, Suyeon, Knarr, Matthew, Vasilev, Steven A., DiFeo, Analisa, Drapkin, Ronny, Hoon, Dave S. B.“…In-silico analysis were performed using multiple databases including The Cancer Genome Atlas, the Genotype-Tissue Expression, The Cancer Cell Line Encyclopedia, Genomics of Drug Sensitivity in Cancer, and Gene Omnibus Expression. …”
Publicado 2023
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11676por Wang, Xuejun, Lin, Qinghong, Liu, Shengtao, Li, Xiaoying, Kong, Xiehe, Wang, Yuliang, Ten, Weijung, Huang, Yangyi, Yang, Yanting, Zhao, Jing, Ma, Xiaopeng, Zhou, Xingtao“…Then, potentially important genes in ceRNA networks were verified by qRT‒PCR, and Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to explore biological functions in the RGCs of FDM guinea pigs. …”
Publicado 2023
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11677“…A model for differentially expressed genes (DEGs) was fitted, and the functional aspects of the obtained set of genes was predicted with GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of genes and Genomes) enrichment analyses. …”
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11678“…Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were used to explore differences in biological function between different risk groups. …”
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11679por Duan, Guochao, Liu, Wei, Han, Haixia, Li, Dapeng, Lei, Qiuxia, Zhou, Yan, Liu, Jie, Wang, Jie, Du, Yuanjun, Cao, Dingguo, Chen, Fu, Li, Fuwei“…Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses showed that pathways were associated with immunoreaction and stress stimulation, e.g., complement activation, interleukin-1 cell reactions, viral responses, cell reactions stimulated by corticotropin releasing hormone, steroid hormone mediated signaling pathways, staphylococcal infections, B cell receptor signaling pathways, and natural killer cell mediated cytotoxicity. …”
Publicado 2023
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11680por Gill, Rafaqat A., Ali, Basharat, Cui, Peng, Shen, Enhui, Farooq, Muhammad A., Islam, Faisal, Ali, Shafaqat, Mao, Bizeng, Zhou, Weijun“…Moreover, RNA-Seq method explored the hazardous behavior of Cr as well as GSH up-regulating mechanism by activating plant metabolism, stress responsive genes, TFs and protein encyclopedia. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-3200-6) contains supplementary material, which is available to authorized users.…”
Publicado 2016
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