“…The online software WebGestalt was used to perform the functional analysis of the DEGs, followed by Osprey software to search for interactions between the DEGs. …”
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“…In this paper, we present a mass spectrometry label-free quantification tool for complex proteomes, called freeQuant, which integrated quantification with functional analysis effectively. freeQuant consists of two well-integrated modules: label-free quantification and functional analysis with biomedical knowledge. freeQuant supports label-free quantitative analysis which makes full use of tandem mass spectrometry (MS/MS) spectral count, protein sequence length, shared peptides, and ion intensity. …”
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“…In this study, we identified aging related genes in brain by collecting the ones with sustained and consistent gene expression or DNA methylation changes in the aging process. Functional analysis with Gene Ontology to these genes suggested transcriptional regulators to be the most affected genes in the aging process. …”
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“…In the present study, the identification of the HvDWARF genomic sequence, its mutational and functional analysis and characterization of new mutants are reported. …”
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“…However, the evolution of statistical methods and functional analysis together with the large amount of expression data provide opportunities to uncover novel biomarkers of inflammation and infections. …”
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“…However, the wide range of the snoRNA landscape spanning all major fungal lineages has not been mapped so far, mainly because of missing tools for automatized snoRNA detection and functional analysis. For the first time, we report here a comprehensive inventory of fungal snoRNAs together with a functional analysis and an in-depth investigation of their evolutionary history including innovations, deletions, and target switches. …”
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“…In all, the findings show that functional complexity poses serious threats to the exhaustiveness of a Web site’s information and that evaluation approaches based on functional analysis can be useful in detecting blindspots in the content provided.…”
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“…This suggests that simultaneous EEG and fNIRS can be used for brain functional analysis, and MSE might be the potential indicator for this multimodality approach.…”
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“…The recent release of the cannabis reference genomes provides key genetic information for the functional analysis of cannabis genes. Currently, however, the established tools for in vivo gene functional analysis in cannabis are very limited. …”
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“…Functional analysis showed genes from normal gene set were related to cell adhesion, and genes from tumor gene set were associated with focal adhesion, PI3K-Akt signaling pathway, regulation of actin cytoskeleton, and VEGF signaling pathway. …”
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“…A total of 1351 differentially expressed proteins were identified in human aortic vascular smooth muscle cells (VSMCs) after ciprofloxacin (CIP) stimulation. The functional analysis emphasized the important roles of metabolism, extracellular matrix homeostasis, mitochondrial damage, focal adhesion, and apoptosis in CIP-stimulated VSMCs. …”
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“…The book is elementary, self-contained and uses methods from functional analysis, with a special focus on the construction of iterative schemes. …”
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“…Bioinformatic tools for functional analysis and protein interaction prediction were also employed. …”
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“…This monograph is an introduction to some special aspects of topology, functional analysis, and analysis for the advanced reader. …”
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“…A recent study in BMC Biology combines gene expression profiling, bioinformatics and functional analysis to identify genes that shape the Drosophila embryo. …”
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“…This volume can also be used as a reference for mathematicians working in or outside the field of topology (functional analysis) wanting to use results or methods of Cp-theory...On the whole, the book provides a useful addition to the literature on Cp-theory, especially at the instructional level." …”
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“…Only a basic knowledge of functional analysis, topology, and complex analysis is assumed. …”
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“…We stress that this book focuses on the lucid exposition of these problems and mathematical backgrounds by explaining the basic knowledge of functional analysis and spectral theory, omitting the technical details in order to make the book accessible to graduate students as an introduction to partial differential equations (PDEs) and functional analysis. .…”
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“…Protein-protein interactions provide insights into the functional analysis because the function of unknown proteins can be postulated on the basis of their interaction evidence with known proteins. …”
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“…GeneBrowser fills the gap between Web portals that analyse one gene at a time and functional analysis tools that are limited in scope and usually desktop-based.…”
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