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8441por Xia, Qinyun, Lyu, Chujun, Li, Fang, Pang, Binbin, Guo, Xiaoyu, Ren, He, Xing, Yiqiao, Chen, Zhen“…CONCLUSIONS: The functional analysis of genes and proteins related to BD, identification of hub genes, and validation of potential drugs provide new insights into the disease mechanism and potential for the treatment of BD.…”
Publicado 2022
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8442por Milanowski, Lukasz M., Hou, Xu, Bredenberg, Jenny M., Fiesel, Fabienne C., Cocker, Liam T., Soto-Beasley, Alexandra I., Walton, Ronald L., Strongosky, Audrey J., Faroqi, Ayman H., Barcikowska, Maria, Boczarska-Jedynak, Magdalena, Dulski, Jaroslaw, Fedoryshyn, Lyuda, Janik, Piotr, Potulska-Chromik, Anna, Karpinsky, Katherine, Krygowska-Wajs, Anna, Lynch, Tim, Olszewska, Diana A., Opala, Grzegorz, Pulyk, Aleksander, Rektorova, Irena, Sanotsky, Yanosh, Siuda, Joanna, Widlak, Mariusz, Slawek, Jaroslaw, Rudzinska-Bar, Monika, Uitti, Ryan, Figura, Monika, Szlufik, Stanislaw, Rzonca-Niewczas, Sylwia, Podgorska, Elzbieta, McLean, Pamela J., Koziorowski, Dariusz, Ross, Owen A., Hoffman-Zacharska, Dorota, Springer, Wolfdieter, Wszolek, Zbigniew K.“…The CTSB p.Gly284Val candidate variant was only identified in affected family members. Functional analysis of CTSB patient-derived fibroblasts under basal conditions did not reveal overt changes in endogenous expression, subcellular localization, or enzymatic activity in the heterozygous carrier of the CTSB variant. …”
Publicado 2022
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8443por Dhaka, Namrata, Jain, Rubi, Yadav, Abhinandan, Yadav, Pinky, Kumar, Neeraj, Sharma, Manoj Kumar, Sharma, Rita“…We detected 112,550 transcripts, of which 27,186 and 19,522 were differentially expressed in the intra-variety comparisons and inter-variety comparisons, respectively. Functional analysis using pathway, gene ontology, and transcription factor enrichment revealed that cell cycle- and cell division-related transcripts stay upregulated during later stages of seed development in the bold-seeded variety but are downregulated at the same stage in the small-seeded variety, indicating that an extended period of cell proliferation in the later stages increased seed weight in PJK as compared to EH2. …”
Publicado 2022
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8444por Ammer‐Herrmenau, Christoph, Wolf, Laurin, Nasrin, Syeda S., Ramu, Iswarya, Roggiolani, Roberta, Goetze, Robert G., Buchholz, Soeren M., Sendler, Mathias, Ellenrieder, Volker, Neesse, Albrecht“…Secreted protein acidic and rich in cysteine expression and severity of AP were determined by histopathological scoring, immunohistochemistry, and biochemical assays. For functional analysis, primary murine acinar cell cultures with subsequent amylase release assays were employed. …”
Publicado 2022
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8445“…Two miRNA–gene interaction networks were constructed among DEGs from two datasets. Functional analysis revealed that immune-related processes were involved in the initiation and metastasis of neuroblastoma. …”
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8446por Xu, Congping, Zhan, Chuansong, Huang, Sishu, Xu, Qijun, Tang, Tang, Wang, Yulin, Luo, Jie, Zeng, Xingquan“…The integrated results show that a rapidly transduction of jasmonic acid (JA) and (+)-7-iso-jasmonoyl-L-isoleucine (JA-Ile), and importantly, a inducing accumulation of aromatic PAs conferred qingke-specific resistance for PM stress. Functional analysis revealed that the four BAHD N-acyltransferase genes were responsible for the synthesis of aliphatic and aromatic PAs. …”
Publicado 2022
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8447por Li, Zhi, Zhang, Chi, Liu, Yiqi, Wang, Fang, Zhao, Baoling, Yang, Junmei, Zhao, Yongjing, Zhao, Hong, Wang, Guiqiang“…METHODS: We screened the septic children microarray dataset from the GEO database and analyzed the ferroptosis-related differentially expressed genes (DEGs). A functional analysis of ferroptosis-related DEGs was performed. …”
Publicado 2022
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8448por Zheng, Yinfei, Yue, Xiaoyu, Fang, Cheng, Jia, Zhuang, Chen, Yuxiang, Xie, Han, Zhao, Jiajia, Yang, Zhihao, Li, Lianxin, Chen, Zhigang, Bian, Erbao, Zhao, Bing“…Immunotherapy and anticancer drug response prediction showed that ER stress-related lncRNA risk signature positively correlates with responding to immune checkpoints and chemosensitivity. Functional analysis showed that these gene sets are enriched in the malignant process of tumors. …”
Publicado 2022
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8449por Zhu, Lin, Gao, Xing, Du, Yun, Tang, Min, Guo, Xiaofei, Chen, Zhigang, Liu, Yulong, Lu, Yimin“…Differential genes were screened by R software, and functional analysis and signal pathway enrichment analysis were carried out. …”
Publicado 2022
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8450“…In addition, novel and unique plasmids harboring resistance (encompassing six antibiotic classes and multiple metals) and virulence (as type VI secretion systems) genes were identified. Functional analysis revealed pathways commonly associated with urban-industrialized groups, such as lipopolysaccharide biosynthesis that was characterized in the Hadza gut plasmids. …”
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8451“…METHODS: Using SOD1(G93A) transgenic mice with targeted deletion of the ALCAT1 gene and treated with Dafaglitapin (Dafa), a very potent and highly selective ALCAT1 inhibitor, we determined whether ablation or pharmaceutical inhibition of ALCAT1 by Dafa would mitigate ALS and the underlying pathogenesis by preventing pathological remodeling of cardiolipin, oxidative stress, and mitochondrial dysfunction by multiple approaches, including lifespan analysis, behavioral tests, morphological and functional analysis of skeletal muscle, electron microscopic and Seahorse analysis of mitochondrial morphology and respiration, western blot analysis of the SOD1(G93A) protein aggregation, and lipidomic analysis of cardiolipin content and acyl composition in mice spinal cord. …”
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8452“…AKT1, TP53, and GO functional analysis were mainly associated with ubiquitination and oxidase reduction activity. …”
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8453“…Next, survival and ROC assays were carried out to demonstrate the model using TCGA. Functional analysis and immune microenvironment analysis related to stage-related DEGs were performed. …”
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8454por Wang, Jie, Fan, Huimei, Xia, Siqi, Shao, Jiahao, Tang, Tao, Chen, Li, Bai, Xue, Sun, Wenqiang, Jia, Xianbo, Chen, Shiyi, Lai, Songjia“…The results showed that the liver, duodenal, and sacculus rotundus tissues of diarrhea rabbits were diseased, the composition of intestinal microbes was significantly changed, the diversity of intestinal microbes was decreased, and the distribution of intestinal microbe groups was changed. Functional analysis based on the cluster of GO and KEGG annotations suggested that two functional GO categories belonged to the metabolism cluster, and five KEGG pathways related to the metabolic pathways were significantly enriched in diarrhea rabbits. …”
Publicado 2022
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8455por Zhang, J., Long, K., Wang, J., Zhang, J., Jin, L., Tang, Q., Li, X., Ma, J., Li, M., Jiang, A.“…Further experiments revealed that the protein tyrosine phosphatase receptor type M (PTPRM) gene was the host gene of bta‐miR‐2285o‐3p and that two linked SNPs in bta‐mir‐2285o precursor affected the biogenesis of mature miRNA (bta‐miR‐2285o‐3p). Functional analysis in vitro indicated that bta‐miR‐2285o‐3p attenuated hypoxia‐induced apoptosis by targeting very low‐density lipoprotein receptor (VLDLR), phosphatase and tensin homolog (PTEN) and caspase‐3. …”
Publicado 2021
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8456“…This study aims to reliably perform functional analysis of previously validated circulating miRNAs' target genes by using pathfindR. …”
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8457por Dorawa, Sebastian, Werbowy, Olesia, Plotka, Magdalena, Kaczorowska, Anna-Karina, Makowska, Joanna, Kozlowski, Lukasz P., Fridjonsson, Olafur H., Hreggvidsson, Gudmundur O., Aevarsson, Arnthór, Kaczorowski, Tadeusz“…We present a structural and functional analysis of the DNA polymerase of thermophilic Thermus thermophilus MAT72 phage vB_Tt72. …”
Publicado 2022
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8458por Soler, Laura, Miller, Ingrid, Terciolo, Chloé, Hummel, Karin, Nöbauer, Katharina, Neves, Manon, Oswald, Isabelle P.“…The combination of two complementary quantitative proteomic approaches (a gel-based and a gel-free approach) identified 18 and 23 differentially abundant proteins (DAPs) for DON and NX, respectively, compared to controls. Functional analysis suggested that, whereas DON toxicity was associated with decreased cell viability and cell destruction, NX toxicity was associated with an enrichment of mitochondrial proteins in the secretome. …”
Publicado 2022
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8459por Bychkov, Igor, Kuznetsova, Antonina, Baydakova, Galina, Gorobets, Leonid, Kenis, Vladimir, Dimitrieva, Alena, Filatova, Alexandra, Tabakov, Vyacheslav, Skoblov, Mikhail, Zakharova, Ekaterina“…The patient’s mRNA analysis and the detailed functional analysis revealed the underlying molecular genetic mechanism of pathogenesis, which is an alteration of the GLB1 normal splicing. …”
Publicado 2022
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8460por Ma, HuSai, Liu, GuoWei, Yu, Bin, Wang, Joshua, Qi, YaLi, Kou, YiYing, Hu, Ying, Wang, ShunJun, Wang, Fei, Chen, Dong“…We found that CELF6-OE induced 417 up-regulated and 1,351 down-regulated DEGs. Functional analysis of down-regulated DEGs showed that they were highly enriched in immune/inflammation response- related pathways and cell adhesion molecules (CAMs). …”
Publicado 2022
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