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Análisis funcional
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Climatic variables influence annual P. montezumae growth
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8461por Li, Yang, Han, Shukun, Wu, Baokang, Zhong, Chongli, Shi, Yu, Lv, Chao, Fu, Lei, Zhang, Yizhou, Lang, Qi, Liang, Zhiyun, Yu, Yang, Tian, Yu“…A positive correlation between CXCL11 and MSI was found in COAD and UVM. Moreover, functional analysis of CXCL11 showed that high CXCL11 expression was significantly related to immune-relevant pathways. …”
Publicado 2022
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8462“…Gene expression profiling indicated that 849 genes were mutually exclusive and functional analysis was done within the context of gene ontology and key pathways involvement. …”
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8463por Wei, Yong-Lu, Jin, Jian-Peng, Liang, Di, Gao, Jie, Li, Jie, Xie, Qi, Lu, Chu-Qiao, Yang, Feng-Xi, Zhu, Gen-Fa“…Overall, our study represented the first genome-wide characterization and functional analysis of WRKY TFs in C. sinense, which could provide useful clues about the evolution and functional description of CsWRKY genes.…”
Publicado 2022
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8464por Wang, Jiajia, Liu, Yiting, Hu, Songping, Xu, Jing, Nian, Jinqiang, Cao, Xiaoping, Chen, Minmin, Cen, Jiangsu, Liu, Xiong, Zhang, Zhihai, Liu, Dan, Zhu, Li, Hu, Jiang, Ren, Deyong, Gao, Zhenyu, Shen, Lan, Dong, Guojun, Zhang, Qiang, Li, Qing, Yu, Sibin, Qian, Qian, Zhang, Guangheng“…Subsequently, the candidate gene was confirmed using complementation, overexpression, and knockout analysis of LOC_Os02g40784. Functional analysis of LTR1 showed that it was a wax synthesis gene and constitutively expressed in entire tissues with higher relative expression level in leaves and panicles. …”
Publicado 2022
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8465por Bae, Sangmee Sharon, Dong, Tien S., Wang, Jennifer, Lagishetty, Venu, Katzka, William, Jacobs, Jonathan P., Charles‐Schoeman, Christina“…Differentially abundant microbial taxa and genes associated with clinical characteristics were identified, and functional analysis was performed using predicted metagenomics. …”
Publicado 2022
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8466por Chen, Juanjuan, Han, Xiaojiao, Ye, Sicheng, Liu, Linxiu, Yang, Bingbing, Cao, Yongqing, Zhuo, Renying, Yao, Xiaohua“…Gene ontology (GO) functional analysis of target genes found that they were related to the signal response to the stimulus and transporter activity, indicating that they may respond to low Pi stress. …”
Publicado 2022
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8467“…Additionally, an integrative analysis combining the RNA-seq and ATAC-seq datasets identified a subset of differentially expressed mRNAs that directly correlated with changes in chromatin accessibility. Finally, functional analysis of differentially expressed metabolic genes in parental and oxamate-resistant PDAC cells treated with and without oxamate, together with an integrative analysis of RNA-seq and metabolomics data, revealed changes in metabolic enzymes that might explain the changes in metabolite levels observed in these cells. …”
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8468por Li, Jian-Hua, Tao, Yi-Feng, Shen, Cong-Huan, Li, Rui-Dong, Wang, Zheng, Xing, Hao, Ma, En-Si, Xue, Hong-Yuan, Zhang, Quan-Bao, Ma, Zhen-Yu, Wang, Zheng-Xin“…The cell line analysis revealed that ENY2 could promote cell cycle progression, cell proliferation, migration, and invasion. The functional analysis of the genes correlated with ENY2 revealed that ENY2 might be involved in telomere maintenance, one of the fundamental hallmarks of cancer. …”
Publicado 2022
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8469“…Kaplan–Meier analysis revealed that higher expression of LGR4 correlates with overall survival of colon adenocarcinoma patients, although expression levels of LGR4 in normal tissues are higher than in tumor tissues. Further functional analysis demonstrated that higher expression of LGR4 in colon adenocarcinoma may be linked to up-regulate metabolism-related pathways, for example, the cholesterol biosynthesis pathway. …”
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8470“…Results: Choline transporter-like protein (CTL) 1 and CTL2 were highly expressed in SIM-A9 cells, and CTL1 and CTL2 were localized in the plasma membrane and mitochondria, respectively. Functional analysis of choline uptake demonstrated the existence of Na(+)-independent, pH-dependent, and intermediate-affinity choline transport systems. …”
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8471“…The key targets included TP53, AKT1, and MYC, and the GO functional analysis was mainly related to oxidative and cellular oxidative stress, apoptotic signaling, and antibiotic response. …”
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8472por Bigagli, Elisabetta, Maggiore, Giandomenico, Cinci, Lorenzo, D'Ambrosio, Mario, Locatello, Luca Giovanni, Nardi, Cosimo, Palomba, Annarita, Leopardi, Gianluca, Orlando, Pietro, Licci, Giuseppe, Gallo, Oreste, Luceri, Cristina“…Low miR-34c levels in NW were associated with orbital (p = 0.009) and intracranial (p = 0.031) extension and with advanced TNM stage (p = 0.054). Functional analysis identified Wnt, Focal adhesion, MAPK and inflammatory signalings among the pathways most enriched in mir-34c targets. …”
Publicado 2022
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8473“…The CCPOC-high patients showed an unfavorable prognosis in the GSE26712 cohort, consistent with the results in the seven public validation cohorts and one independent internal cohort (BL-OC cohort, qRT-PCR, n = 51). Functional analysis, drug-sensitive analysis, and survival analysis showed that CCPOC-low patients were related to strengthened tumor immunogenicity and sensitive to the anti-PD-1/PD-L1 response rate in pan-cancer (r = −0.47, OC excluded), which indicated that CCPOC-low patients may be more sensitive to anti-PD-1/PD-L1. …”
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8474por Du, Yueqi, Wu, Ellen, Gao, Xiang, Zhang, Jie, Martin, John C., Rosa, Bruce A., Mitreva, Makedonka, Ratner, Lee“…Approximately half of the amplified full-length single envelope-encoding clones had no significant activity for infection of cells expressing high levels of CD4 and CCR5 or CXCR4. Functional analysis of 9 to 21 individual infectious clones at baseline and at the time of VF were used to construct phylogenetic trees and sequence alignments. …”
Publicado 2022
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8475“…Gene Ontology (GO) functional analysis was also performed afterwards to construct the component-target gene-disease network to visualize the correlation between WHQD and PCOS. …”
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8476por Gong, Wenxia, Wang, Kexin, Wang, Xueyuan, Chen, Yupeng, Qin, Xuemei, Lu, Aiping, Guan, Daogang“…According to the network motif detection algorithm, key core function motifs (CIM) of DSS in treating depression were captured, followed by a functional analysis and verification. The results demonstrated that 198 pathways were enriched by the target genes of the CIM, and 179 coincided with the enriched pathways of pathogenic genes, accounting for 90.40% of the gene enrichment pathway of the C-T network. …”
Publicado 2022
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8477“…Upstream regulator analysis showed that the mTOR associated protein RICTOR appears to play an important role in inducing the transcriptional changes in infected individuals. Functional analysis of the genes affected by infection indicated a suppression of antibody response, Th17 immune response and proliferation of activated T lymphocytes. …”
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8478por Zhong, Tao, Zhao, Juan, Zhan, Siyuan, Wang, Linjie, Cao, Jiaxue, Dai, Dinghui, Guo, Jiazhong, Li, Li, Zhang, Hongping, Niu, Lili“…The weighted gene co-expression network analysis and functional analysis were performed to explore the regulatory roles of those differentially expressed molecules. …”
Publicado 2022
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8479por Hirtz, Alex, Lebourdais, Nolwenn, Thomassin, Magalie, Rech, Fabien, Dumond, Hélène, Dubois-Pot-Schneider, Hélène“…Then, the link between the expression levels (low or high) of the steroid biosynthesis enzyme or receptors of interest and survival was studied using the log-rank test. Finally, a functional analysis of gender-specific correlated genes was performed. …”
Publicado 2022
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8480“…Univariate and multivariate Cox regression analyses demonstrated that the risk score was an independent prognostic factor for overall survival (OS). Functional analysis showed that differentially expressed genes (DEGs) between the low- and high-risk groups were enriched in mitosis and the cell cycle pathway. …”
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