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Análisis funcional
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Climatic variables influence annual P. montezumae growth
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9421por Romani, Chiara, Lorini, Luigi, Bozzola, Anna, Bignotti, Eliana, Tomasoni, Michele, Ardighieri, Laura, Bugatti, Mattia, Battocchio, Simonetta, Ravaggi, Antonella, Tomasini, Davide, Ravanelli, Marco, Gurizzan, Cristina, Lombardi, Davide, Mattavelli, Davide, Calza, Stefano, Piazza, Cesare, Bossi, Paolo“…Through a gene expression microarray-based approach followed by GSE functional analysis the expression profile of 46 primary untreated ACC samples and of ACC (h-TERT) tumor cells was analyzed. …”
Publicado 2023
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9422por Jhingan, Srijan, Harloff, Hans-Joachim, Abbadi, Amine, Welsch, Claudia, Blümel, Martina, Tasdemir, Deniz, Jung, Christian“…Our results provide the first functional analysis by knock-out for the two GSL biosynthesis genes in winter rapeseed. …”
Publicado 2023
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9423por Mezheyeuski, Artur, Backman, Max, Mattsson, Johanna, Martín-Bernabé, Alfonso, Larsson, Chatarina, Hrynchyk, Ina, Hammarström, Klara, Ström, Simon, Ekström, Joakim, Mauchanski, Siarhei, Khelashvili, Salome, Lindberg, Amanda, Agnarsdóttir, Margrét, Edqvist, Per-Henrik, Huvila, Jutta, Segersten, Ulrika, Malmström, Per-Uno, Botling, Johan, Nodin, Björn, Hedner, Charlotta, Borg, David, Brändstedt, Jenny, Sartor, Hanna, Leandersson, Karin, Glimelius, Bengt, Portyanko, Anna, Ponten, Fredrik, Jirström, Karin, Micke, Patrick, Sjöblom, Tobias“…Single-cell and bulk RNAseq data sets were used for functional analysis and validation of prognostic and predictive associations. …”
Publicado 2023
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9424por Han, Shuai, Jiang, Dongjie, Zhang, Feng, Li, Kun, Jiao, Kun, Hu, Jingyun, Song, Haihan, Ma, Qin-Yun, Wang, Jian“…Cox regression and Lasso regression analyses were conducted to screen prognostic signature and to develop a risk model. RESULTS: Functional analysis showed that immune-related hub genes were involved in the migration, activation, response, and cytokine-cytokine receptor interaction of immune cells. …”
Publicado 2023
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9425por Wu, Ting, Wu, Yuwei, Jiang, Danli, Sun, Wei, Zou, Meijuan, Vasamsetti, Sathish Babu, Dutta, Partha, Leers, Steven A., Di, Wu, Li, Gang“…Genome‐wide association studies (GWAS) have validated a strong association of atherosclerosis with the CDKN2A/B locus, a locus harboring three tumor suppressor genes: p14 ( ARF ), p15 ( INK4b ), and p16 ( INK4a ). Post‐GWAS functional analysis reveals that CUX is a transcriptional activator of p16(INK4a) via its specific binding to a functional SNP (fSNP) rs1537371 on the atherosclerosis‐associated CDKN2A/B locus, regulating endothelial senescence. …”
Publicado 2023
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9426por Wen, Yu, Zhou, Jinglong, Feng, Hongjie, Sun, Wanqing, Zhang, Yalin, Zhao, Lihong, Cheng, Yong, Feng, Zili, Zhu, Heqin, Wei, Feng“…Verticillium dahliae Kleb is a typical soilborne pathogen that can cause vascular wilt disease on more than 400 plants. Functional analysis of genes related to the growth and virulence is crucial to revealing the molecular mechanism of the pathogenicity of V. dahliae. …”
Publicado 2022
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9427por Niu, Jiakuan, Liu, Xiao, Xu, Junying, Li, Fen, Wang, Jincan, Zhang, Xixi, Yang, Xu, Wang, Lin, Ma, Sen, Li, Defeng, Zhu, Xiaoyan, Wang, Chengzhang, Shi, Yinghua, Cui, Yalei“…According to 16S rRNA sequencing, Clostridium_sensu_stricto_1, Terrisporobacter, and Lachnospiraceae, which are important in SCFA production, were biomarkers of mulberry silage. PICRUSt functional analysis of intestinal microbes indicated that galactose metabolism, starch and sucrose metabolism, and carbohydrate digestion and absorption decreased significantly in silage treatments but increased in the control. …”
Publicado 2022
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9428por Wang, Caiyun, Zhao, Xiaodong, Zhang, Haibin, Bing, Zhitong, Wu, Yu, Li, Rui, Yang, Yongxiu, Yang, Kehu“…RESULTS: In this research, we identified 24 candidate immune-related DEGs via combined DEGs and functional analysis. We also found that the ratio of M0 macrophages and resting mast cells was higher in infertile group (P<0.05), whereas the amounts of activated natural killer (NK) cells was significantly lower compared with the control group (P<0.05). …”
Publicado 2023
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9429“…The area under the curve (AUC) value of the ROC curve of the predictive model is 0.763 in the training cohort GSE72970, 0.659 in the stage III/IV colorectal cancer (CRC) patients from The Cancer Genome Atlas (TCGA) data portal, and 0.639 in another validation cohort GSE39582, respectively. GSEA functional analysis revealed that the most significantly enriched pathways focused on nucleotide excision repair, base excision repair, homologous recombination, cytokine receptor interaction, chemokine signal pathway, cell adhesion molecules cams, ECM-receptor interaction, and focal adhesion. …”
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9430por Fontana, Federico, Longhi, Giulia, Alessandri, Giulia, Lugli, Gabriele Andrea, Mancabelli, Leonardo, Tarracchini, Chiara, Viappiani, Alice, Anzalone, Rosaria, Ventura, Marco, Turroni, Francesca, Milani, Christian“…Furthermore, an in-depth functional analysis, along with a comparative genomic analysis, was performed in order to correlate the taxonomic information with the organoleptic properties of the final product. …”
Publicado 2023
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9431por Qi, Xue-Jia, Huang, Chong-Yin, Zuo, Meng-Ting, Gong, Meng-Die, Huang, Si-Juan, Tang, Mo-Huan, Liu, Zhao-Ying“…A total of 85 alkaloids in Gelsemium associated with 214 excitotoxicity-related targets were predicted by network pharmacology. Functional analysis showed that the toxicity of Gelsemium was mainly related to the protein phosphorylation reaction and plasma membrane function. …”
Publicado 2023
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9432por Nian, Rui, Li, Wanjun, Li, Xiang, Zhang, Jiayu, Li, Weihua, Pan, Fanfan, Cheng, Jing, Jin, Xin“…Considering the critical role of lncRNAs in cancer biology, further functional analysis of MCM3AP-AS1 in PTC may provide novel insights into PTC management. …”
Publicado 2022
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9433por Zorich, Vladimir A“…It shows how analysis interacts with other modern fields of mathematics such as algebra, differential geometry, differential equations, complex analysis, and functional analysis. This book provides a firm foundation for advanced work in any of these directions. …”
Publicado 2016
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9434por Ye, Xian-wen, Liu, Meng-nan, Wang, Xuan, Cheng, Shui-qing, Li, Chun-shuai, Bai, Yu-ying, Yang, Lin-lin, Wang, Xu-xing, Wen, Jia, Xu, Wen-juan, Zhang, Shu-yan, Xu, Xin-fang, Li, Xiang-ri“…RESULTS: The subsequent analyses included 339 common DEGs, and the importance of immunity, hormone, cytokines, neurotransmitters, and insulin in these diseases was underscored by functional analysis. In addition, serotonergic synapse, ovarian steroidogenesis, estrogen signaling pathway, and regulation of lipolysis are closely related to both. …”
Publicado 2023
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9435“…The Gene Set Enrichment Analysis (GSEA) was used for functional analysis. The “oncoPredict” package was applied for drug sensitivity analysis. …”
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9436por Zaza, Gianluigi, Neri, Flavia, Bruschi, Maurizio, Granata, Simona, Petretto, Andrea, Bartolucci, Martina, di Bella, Caterina, Candiano, Giovanni, Stallone, Giovanni, Gesualdo, Loreto, Furian, Lucrezia“…Latexin (LXN), an endogenous carboxypeptidase inhibitor, resulted the most-upregulated protein at T120, and this result was confirmed by ELISA. In addition, functional analysis revealed that the most strongly upregulated proteins were involved in the oxidative phosphorylation system and ATP synthesis, whereas the downregulated proteins represented the complement system and coagulation cascade. …”
Publicado 2023
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9437por Nakagawa, Ryoya, Hirano, Hisato, Omura, Satoshi N., Nety, Suchita, Kannan, Soumya, Altae-Tran, Han, Yao, Xiao, Sakaguchi, Yuriko, Ohira, Takayuki, Wu, Wen Y., Nakayama, Hiroshi, Shuto, Yutaro, Tanaka, Tatsuki, Sano, Fumiya K., Kusakizako, Tsukasa, Kise, Yoshiaki, Itoh, Yuzuru, Dohmae, Naoshi, van der Oost, John, Suzuki, Tsutomu, Zhang, Feng, Nureki, Osamu“…Furthermore, the structure, along with our functional analysis, reveals how the compact TnpB recognizes the ωRNA and cleaves target DNA complementary to the guide. …”
Publicado 2023
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9438“…Our approach is designed to facilitate in silico validation of associations beyond traditional candidate gene and literature-search approaches and to facilitate the identification of putative variants for functional analysis and reduce the incidence of false-positive candidates in current functional validation methods. …”
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9439por Jeong, Hye Yun, An, Hyun-Ju, Sung, Min Ji, Ha, Min Heui, Lee, Yu Ho, Yang, Dong Ho, Yang, Tae Young, Han, Dohyun, Lee, So-Young“…In the protein functional analysis, the significantly expressed proteins were involved in the immune response. …”
Publicado 2023
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9440por Muratore, Daniel, Bertagnolli, Anthony D., Bristow, Laura A., Thamdrup, Bo, Weitz, Joshua S., Stewart, Frank J.“…We identified arginine as a key amino acid in the modulation of the C:N ratios of core genes for bacteria, archaea, and viruses. Functional analysis reveals that particle-associated bacterial metagenomes are enriched for genes that are involved in arginine metabolism and organic nitrogen compound catabolism. …”
Publicado 2023
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