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2121por Klann, Jeffrey G, Abend, Aaron, Raghavan, Vijay A, Mandl, Kenneth D, Murphy, Shawn N“…The Informatics for Integrating Biology and the Bedside (i2b2) project supports data network interoperability through an ontology-driven approach. We use i2b2 as a hub, to rapidly reconfigure data to meet new analytical requirements without new ETL programming. …”
Publicado 2016
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2122por Ritter, Deborah I., Roychowdhury, Sameek, Roy, Angshumoy, Rao, Shruti, Landrum, Melissa J., Sonkin, Dmitriy, Shekar, Mamatha, Davis, Caleb F., Hart, Reece K., Micheel, Christine, Weaver, Meredith, Van Allen, Eliezer M., Parsons, Donald W., McLeod, Howard L., Watson, Michael S., Plon, Sharon E., Kulkarni, Shashikant, Madhavan, Subha“…CONCLUSIONS: We expect the use of the MVLD to streamline clinical interpretation of cancer variants, enhance interoperability among multiple redundant curation efforts, and increase submission of somatic variants to ClinVar, all of which will enhance translation to clinical oncology practice. …”
Publicado 2016
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2123“…It can replace expensive and error-prone manual parsing and standardization of scientific names in many situations, and can quickly enhance the interoperability of distributed biological information. …”
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2124por Martínez-Romero, Marcos, Jonquet, Clement, O’Connor, Martin J., Graybeal, John, Pazos, Alejandro, Musen, Mark A.“…Researchers use ontologies to annotate their data with ontology terms, enabling better data integration and interoperability across disparate datasets. However, the number, variety and complexity of current biomedical ontologies make it cumbersome for researchers to determine which ones to reuse for their specific needs. …”
Publicado 2017
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2125por Brainerd, Elizabeth L., Blob, Richard W., Hedrick, Tyson L., Creamer, Andrew T., Müller, Ulrike K.“…The first four standards address data preservation and interoperability for sharing, whereas standards 5–9 establish minimum metadata standards for organismal biology video, and suggest additional metadata that may be useful for some studies. …”
Publicado 2017
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2126“…OBJECTIVES: In order to improve the accessibility, reusability, and interoperability of the data and metadata stored in ‘mwTab’ formatted files, we implemented a Python library and package. …”
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2127por Banerjee, Arunima, Paluh, Janet L, Mukherjee, Amitava, Kumar, K Gaurav, Ghosh, Archisman, Naskar, Mrinal K“…Our model applies published experimental data on calcium channel manipulation of DCV-BDNF and incorporates organizational complexity of the axon as bundled polar and discontinuous MTs. The interoperability simulation is based on the Institute of Electrical and Electronics Engineers standard association P1906.1 framework for nanoscale and molecular communication. …”
Publicado 2018
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2128por Schwartz, Sheree R, Kavanagh, Matthew M, Sugarman, Jeremy, Solomon, Sunil S, Njindam, Illiassou M, Rebe, Kevin, Quinn, Thomas C, Toure‐Kane, Coumba, Beyrer, Chris, Baral, Stefan“…Finally, improving the interoperability of health systems through judicious use of biometrics or identifiers when confidentiality can be maintained is important to generate more valuable data to inform monitoring programmes. …”
Publicado 2017
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2129por Steele Gray, Carolyn, Barnsley, Jan, Gagnon, Dominique, Belzile, Louise, Kenealy, Tim, Shaw, James, Sheridan, Nicolette, Wankah Nji, Paul, Wodchis, Walter P.“…However, providers were limited in their ability to efficiently share patient data due to data access issues across organizational and professional boundaries and due to system functionality limitations, such as a lack of interoperability. CONCLUSIONS: Even in innovative models of care, managers and providers in our cases mainly use technology to enable traditional ways of working. …”
Publicado 2018
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2130por Cusin, Isabelle, Teixeira, Daniel, Zahn-Zabal, Monique, Rech de Laval, Valentine, Gleizes, Anne, Viassolo, Valeria, Chappuis, Pierre O., Hutter, Pierre, Bairoch, Amos, Gaudet, Pascale“…The data was captured using standard ontologies to ensure consistency, and enhance searchability and interoperability. We have assessed the extent to which functional defects at the molecular and cellular levels correlate with the clinical interpretation of variants by ClinVar submitters. …”
Publicado 2018
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2131por Willett, Duwayne L., Kannan, Vaishnavi, Chu, Ling, Buchanan, Joel R., Velasco, Ferdinand T., Clark, John D., Fish, Jason S., Ortuzar, Adolfo R., Youngblood, Josh E., Bhat, Deepa G., Basit, Mujeeb A.“…For constructing value sets, Systematized Nomenclature of Medicine–Clinical Terms (SNOMED CT) offers high clinical fidelity, a hierarchical ontology, and wide implementation in EHRs as the standard interoperability vocabulary for problems. Objective This article demonstrates a practical approach to defining conditions with combinations of SNOMED CT concept hierarchies, and evaluates sharing of definitions for clinical and analytic uses. …”
Publicado 2018
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2132“…BACKGROUND: The openEHR approach can improve the interoperability of electronic health record (EHR) through two-level modeling. …”
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2133por Tran Ngoc, Candide, Bigirimana, Noella, Muneene, Derrick, Bataringaya, Juliet Evelyn, Barango, Prebo, Eskandar, Hani, Igiribambe, Raissah, Sina-Odunsi, Ayomide, Condo, Jeanine Umutesi, Olu, Olushayo“…However, the huge potential benefits of digital health to advance health services delivery in Africa is yet to be fully harnessed due to critical challenges such as proliferation of pilot projects, poor coordination, inadequate preparedness of the African health workforce for digital health, lack of interoperability and inadequate sustainable financing, among others. …”
Publicado 2018
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2134“…BACKGROUND: In the Next Generation Sequencing (NGS) era a large amount of biological data is being sequenced, analyzed, and stored in many public databases, whose interoperability is often required to allow an enhanced accessibility. …”
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2135por Köhler, Sebastian, Carmody, Leigh, Vasilevsky, Nicole, Jacobsen, Julius O B, Danis, Daniel, Gourdine, Jean-Philippe, Gargano, Michael, Harris, Nomi L, Matentzoglu, Nicolas, McMurry, Julie A, Osumi-Sutherland, David, Cipriani, Valentina, Balhoff, James P, Conlin, Tom, Blau, Hannah, Baynam, Gareth, Palmer, Richard, Gratian, Dylan, Dawkins, Hugh, Segal, Michael, Jansen, Anna C, Muaz, Ahmed, Chang, Willie H, Bergerson, Jenna, Laulederkind, Stanley J F, Yüksel, Zafer, Beltran, Sergi, Freeman, Alexandra F, Sergouniotis, Panagiotis I, Durkin, Daniel, Storm, Andrea L, Hanauer, Marc, Brudno, Michael, Bello, Susan M, Sincan, Murat, Rageth, Kayli, Wheeler, Matthew T, Oegema, Renske, Lourghi, Halima, Della Rocca, Maria G, Thompson, Rachel, Castellanos, Francisco, Priest, James, Cunningham-Rundles, Charlotte, Hegde, Ayushi, Lovering, Ruth C, Hajek, Catherine, Olry, Annie, Notarangelo, Luigi, Similuk, Morgan, Zhang, Xingmin A, Gómez-Andrés, David, Lochmüller, Hanns, Dollfus, Hélène, Rosenzweig, Sergio, Marwaha, Shruti, Rath, Ana, Sullivan, Kathleen, Smith, Cynthia, Milner, Joshua D, Leroux, Dorothée, Boerkoel, Cornelius F, Klion, Amy, Carter, Melody C, Groza, Tudor, Smedley, Damian, Haendel, Melissa A, Mungall, Chris, Robinson, Peter N“…Its detailed descriptions of clinical abnormalities and computable disease definitions have made HPO the de facto standard for deep phenotyping in the field of rare disease. The HPO’s interoperability with other ontologies has enabled it to be used to improve diagnostic accuracy by incorporating model organism data. …”
Publicado 2019
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2136por Sergouniotis, Panagiotis I., Maxime, Emmanuel, Leroux, Dorothée, Olry, Annie, Thompson, Rachel, Rath, Ana, Robinson, Peter N., Dollfus, Hélène“…They can be used to provide robust terminology standards and to enhance data interoperability. Here, we discuss the development of the ophthalmology-related component of two well-established biomedical ontologies, the Human Phenotype Ontology (HPO; includes signs, symptoms and investigation findings) and the Orphanet Rare Disease Ontology (ORDO; includes rare disease nomenclature/nosology). …”
Publicado 2019
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2137“…Switzerland’s diversity and complexity, in terms of its organization with 26 cantons (administrative divisions), were barriers as these made it harder to ensure interoperability of interventions. A culture of innovation was considered a push factor, but adoption was inhibited by persistent paper-based systems, a fear of change, and unwillingness to share data. …”
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2138por De Antonio, Marie, Dogan, Céline, Daidj, Ferroudja, Eymard, Bruno, Puymirat, Jack, Mathieu, Jean, Gagnon, Cynthia, Katsahian, Sandrine, Hamroun, Dalil, Bassez, Guillaume“…As recent studies pointed to several limitations of RD registries our challenge was (1) to improve standardization and data comparability; (2) to facilitate interoperability between existing RD registries; (3) to limit the amount of incomplete data; (4) to improve data quality. …”
Publicado 2019
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2139por Selby, Peter, Abbeloos, Rafael, Backlund, Jan Erik, Basterrechea Salido, Martin, Bauchet, Guillaume, Benites-Alfaro, Omar E, Birkett, Clay, Calaminos, Viana C, Carceller, Pierre, Cornut, Guillaume, Vasques Costa, Bruno, Edwards, Jeremy D, Finkers, Richard, Yanxin Gao, Star, Ghaffar, Mehmood, Glaser, Philip, Guignon, Valentin, Hok, Puthick, Kilian, Andrzej, König, Patrick, Lagare, Jack Elendil B, Lange, Matthias, Laporte, Marie-Angélique, Larmande, Pierre, LeBauer, David S, Lyon, David A, Marshall, David S, Matthews, Dave, Milne, Iain, Mistry, Naymesh, Morales, Nicolas, Mueller, Lukas A, Neveu, Pascal, Papoutsoglou, Evangelia, Pearce, Brian, Perez-Masias, Ivan, Pommier, Cyril, Ramírez-González, Ricardo H, Rathore, Abhishek, Raquel, Angel Manica, Raubach, Sebastian, Rife, Trevor, Robbins, Kelly, Rouard, Mathieu, Sarma, Chaitanya, Scholz, Uwe, Sempéré, Guilhem, Shaw, Paul D, Simon, Reinhard, Soldevilla, Nahuel, Stephen, Gordon, Sun, Qi, Tovar, Clarysabel, Uszynski, Grzegorz, Verouden, Maikel“…RESULTS: To facilitate interoperability among breeding applications, we present the public plant Breeding Application Programming Interface (BrAPI). …”
Publicado 2019
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2140por Zimmerman, Janice L.“…These systems must have characteristics of association, interoperability, integration, security, safety, and real-time synchronization(4). …”
Publicado 2019
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