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2621por Naithani, Sushma, Gupta, Parul, Preece, Justin, D’Eustachio, Peter, Elser, Justin L, Garg, Priyanka, Dikeman, Daemon A, Kiff, Jason, Cook, Justin, Olson, Andrew, Wei, Sharon, Tello-Ruiz, Marcela K, Mundo, Antonio Fabregat, Munoz-Pomer, Alfonso, Mohammed, Suhaib, Cheng, Tiejun, Bolton, Evan, Papatheodorou, Irene, Stein, Lincoln, Ware, Doreen, Jaiswal, Pankaj“…The Plant Reactome supports, implements and collaborates with the wider community to make data and tools related to genes, genomes, and pathways Findable, Accessible, Interoperable and Re-usable (FAIR).…”
Publicado 2020
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2622por Bates, Alexander Shakeel, Manton, James D, Jagannathan, Sridhar R, Costa, Marta, Schlegel, Philipp, Rohlfing, Torsten, Jefferis, Gregory SXE“…To facilitate this, we have developed a suite of interoperable open-source R packages called the natverse. …”
Publicado 2020
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2623por Lubrano, Francesco, Stirano, Federico, Varavallo, Giuseppe, Bertone, Fabrizio, Terzo, Olivier“…Finally, HAMS implements the OASIS EDXL-HAVE standard, to allow the exchange of information in a open and interoperable format.…”
Publicado 2020
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2624por Ali, Salma R., Bryce, Jillian, Tan, Li En, Hiort, Olaf, Pereira, Alberto M., van den Akker, Erica L. T., Appelman-Dijkstra, Natasha M., Bertherat, Jerome, Cools, Martine, Dekkers, Olaf M., Kodra, Yllka, Persani, Luca, Smyth, Arelene, Smythe, Christopher, Taruscio, Domenica, Ahmed, S. Faisal“…With the recent expansion of RD registries, it has become even more essential to outline standards of good practice in relation to governance, infrastructure, documentation, training, audits and adopting the Findable, Accessible, Interoperable and Reusable (FAIR) data principles to maintain registries of high quality. …”
Publicado 2020
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2625“…Ultimately, greater multi-institutional collaborative effort is needed to provide and implement standards for data acquisition and analysis methods to facilitate research results to be interoperable and reliable for integration into different practice environments.…”
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2626por von Sengbusch, Simone, Frielitz, Fabian S., Braune, Katarina, Boss, Karina, Raile, Klemens“…Data from continuous glucose measurement (CGM) systems and insulin pumps can increasingly be downloaded and shared via interoperable or manufacturer-based data platforms, and thus enable health care professionals of diabetes teams to provide advice based on these data for continuous medical care, even if not met in-person. …”
Publicado 2021
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2627por Kolar, Kushal, Dondorp, Daniel, Zwiggelaar, Jordi Cornelis, Høyer, Jørgen, Chatzigeorgiou, Marios“…Here we present Mesmerize, an efficient, expandable and user-friendly analysis platform, which uses a Findable, Accessible, Interoperable and Reproducible (FAIR) system to encapsulate the entire analysis process, from raw data to interactive visualizations for publication. …”
Publicado 2021
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2628por Savoi, Stefania, Arapitsas, Panagiotis, Duchêne, Éric, Nikolantonaki, Maria, Ontañón, Ignacio, Carlin, Silvia, Schwander, Florian, Gougeon, Régis D., Ferreira, António César Silva, Theodoridis, Georgios, Töpfer, Reinhard, Vrhovsek, Urska, Adam-Blondon, Anne-Francoise, Pezzotti, Mario, Mattivi, Fulvio“…Lately, more and more journals now require authors to share data and metadata according to the FAIR (Findable, Accessible, Interoperable, Reusable) principles. This work aims to provide a step-by-step guideline for the FAIR data and metadata management specific to grapevine and wine science. …”
Publicado 2021
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2629por Cushnan, Dominic, Berka, Rosalind, Bertolli, Ottavia, Williams, Peter, Schofield, Daniel, Joshi, Indra, Favaro, Alberto, Halling-Brown, Mark, Imreh, Gergely, Jefferson, Emily, Sebire, Neil J, Reilly, Gerry, Rodrigues, Jonathan C L, Robinson, Graham, Copley, Susan, Malik, Rizwan, Bloomfield, Claire, Gleeson, Fergus, Crotty, Moira, Denton, Erika, Dickson, Jeanette, Leeming, Gary, Hardwick, Hayley E, Baillie, Kenneth, Openshaw, Peter JM, Semple, Malcolm G, Rubin, Caroline, Howlett, Andy, Rockall, Andrea G, Bhayat, Ayub, Fascia, Daniel, Sudlow, Cathie, Jacob, Joseph“…Historically, coordinating the collation of such datasets on a national scale has been challenging to execute for several reasons, including issues with data privacy, the lack of data reporting standards, interoperable technologies, and distribution methods. …”
Publicado 2021
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2630por Bai, Jiaru, Cao, Liwei, Mosbach, Sebastian, Akroyd, Jethro, Lapkin, Alexei A., Kraft, Markus“…Emerging technologies for interoperable data representation and multi-agent systems are also discussed with their recent applications in chemical automation. …”
Publicado 2022
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2631por Ehlich, Hilke, Cater, Heather L., Flenniken, Ann M., Goncalves Da Cruz, Isabelle, Mura, Anne-Marie, Ntafis, Vasileios, Raess, Michael, Selloum, Mohammed, Stoeger, Claudia, Suchanova, Sarka, Vuolteenaho, Reetta, Brown, Steve D. M., Hérault, Yann, Hinttala, Reetta, Hrabě de Angelis, Martin, Kollias, George, Kontoyiannis, Dimitris L., Malissen, Bernard, McKerlie, Colin, Sedláček, Radislav, Wells, Sara E., Zarubica, Ana, Rozman, Jan, Sorg, Tania“…Recently established requirements such as the provision of FAIR (Findable, Accessible, Interoperable, Reusable) data are also addressed. For each quality principle, we have outlined the specific context, requirements, further recommendations, and key references. …”
Publicado 2021
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2632por List, Johann-Mattis, Forkel, Robert, Greenhill, Simon J., Rzymski, Christoph, Englisch, Johannes, Gray, Russell D.“…We have designed workflows for the computer-assisted lifting of datasets to Cross-Linguistic Data Formats, a collection of standards that make these datasets more Findable, Accessible, Interoperable, and Reusable (FAIR). We test the Lexibank workflow on 100 lexical datasets from which we derive an aggregated database of wordlists in unified phonetic transcriptions covering more than 2000 language varieties. …”
Publicado 2022
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2633“…One of the objectives of GIPAMS is to enable the management of different formats of genomic information in a unique and interoperable way, providing privacy and security for formats that do not currently support them.…”
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2634por Hardisty, Alex R, Ellwood, Elizabeth R, Nelson, Gil, Zimkus, Breda, Buschbom, Jutta, Addink, Wouter, Rabeler, Richard K, Bates, John, Bentley, Andrew, Fortes, José A B, Hansen, Sara, Macklin, James A, Mast, Austin R, Miller, Joseph T, Monfils, Anna K, Paul, Deborah L, Wallis, Elycia, Webster, Michael“…Led by an array of asynchronous digitization activities spanning ecological, environmental, climatological, and biological collections data, these initiatives have resulted in a plethora of mostly disconnected and siloed data, leaving to researchers the tedious and time-consuming manual task of finding and connecting them in usable ways, integrating them into coherent data sets, and making them interoperable. The focus to date has been on elevating analog and physical records to digital replicas in local databases prior to elevating them to ever-growing aggregations of essentially disconnected discipline-specific information. …”
Publicado 2022
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2635por Rübel, Oliver, Tritt, Andrew, Ly, Ryan, Dichter, Benjamin K, Ghosh, Satrajit, Niu, Lawrence, Baker, Pamela, Soltesz, Ivan, Ng, Lydia, Svoboda, Karel, Frank, Loren, Bouchard, Kristofer E“…Understanding the brain requires integration of data across this diversity, and thus these data must be findable, accessible, interoperable, and reusable (FAIR). This requires a standard language for data and metadata that can coevolve with neuroscience. …”
Publicado 2022
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2636por Barker, Michelle, Chue Hong, Neil P., Katz, Daniel S., Lamprecht, Anna-Lena, Martinez-Ortiz, Carlos, Psomopoulos, Fotis, Harrow, Jennifer, Castro, Leyla Jael, Gruenpeter, Morane, Martinez, Paula Andrea, Honeyman, Tom“…Improving the practice of scholarship is a common goal of the open science, open source, and FAIR (Findable, Accessible, Interoperable and Reusable) communities and research software is now being understood as a type of digital object to which FAIR should be applied. …”
Publicado 2022
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2637por Hu, Bin, Canon, Shane, Eloe-Fadrosh, Emiley A., Anubhav, Babinski, Michal, Corilo, Yuri, Davenport, Karen, Duncan, William D., Fagnan, Kjiersten, Flynn, Mark, Foster, Brian, Hays, David, Huntemann, Marcel, Jackson, Elais K. Player, Kelliher, Julia, Li, Po-E., Lo, Chien-Chi, Mans, Douglas, McCue, Lee Ann, Mouncey, Nigel, Mungall, Christopher J., Piehowski, Paul D., Purvine, Samuel O., Smith, Montana, Varghese, Neha Jacob, Winston, Donald, Xu, Yan, Chain, Patrick S. G.“…Additionally, there are few examples of broad bioinformatics workflows that can process metagenome, metatranscriptome, metaproteome and metabolomic data at scale, and no central hub that allows processing, or provides varied omics data that are findable, accessible, interoperable and reusable (FAIR). Here, we review some of the challenges that exist in analyzing omics data within the microbiome research sphere, and provide context on how the National Microbiome Data Collaborative has adopted a standardized and open access approach to address such challenges.…”
Publicado 2022
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2638por Wahid, Kareem A., Glerean, Enrico, Sahlsten, Jaakko, Jaskari, Joel, Kaski, Kimmo, Naser, Mohamed A., He, Renjie, Mohamed, Abdallah S.R., Fuller, Clifton D.“…Importantly, the recent establishment of Findable, Accessible, Interoperable, Reusable (FAIR) principles for scientific data management have enabled an increasing number of radiation oncology related datasets to be disseminated through data repositories, thereby acting as a rich source of data for AI model building. …”
Publicado 2022
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2639por Troia, Gabrielle, Stamps, D. Sarah, Lotspeich, R. Russell, Duda, James, McCoy, Kurt J., Moore, William, Hensel, Philippe, Hippenstiel, Ryan, McKenna, Thomas, Andreasen, David, Geoghegan, Charles, Ulizio, Thomas P., Kronebusch, Madeline, Carr, Joel, Walters, David, Winn, Neil“…All data are archived and publicly available for open access at the geodesy facility UNAVCO to abide by Findable, Accessible, Interoperable, Reusable (FAIR) data principles.…”
Publicado 2022
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2640“…Therefore, different ways have emerged in which biobanks, including those for infectious diseases, can emerge as (part of) infrastructures, integrate within existing ones, or become an independent, yet an interoperable component of the existing infrastructural landscape. …”
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