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194821“…The two parasite species were distinguished by three-point mutations. Thus, one pair of primers was complementary to L. mediterraneus, the other, to L. cephali. …”
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194822por Cahn, Fanny, Revon-Riviere, Gabriel, Min, Victoria, Rome, Angélique, Filaine, Pauline, Pelletier, Annick, Abed, Sylvie, Gentet, Jean-Claude, Verschuur, Arnauld, André, Nicolas“…Molecular profiling using Foundation One® Liquid CDx was feasible in pediatric patients with high-risk solid tumors and lead to identification of targetable mutations in a subset of patients.…”
Publicado 2022
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194823por Kamal, Mohammad Azhar, Siddiqui, Imran, Belgiovine, Cristina, Barbagallo, Marialuisa, Paleari, Valentina, Pistillo, Daniela, Chiabrando, Chiara, Schiarea, Silvia, Bottazzi, Barbara, Leone, Roberto, Avigni, Roberta, Migliore, Roberta, Spaggiari, Paola, Gavazzi, Francesca, Capretti, Giovanni, Marchesi, Federica, Mantovani, Alberto, Zerbi, Alessandro, Allavena, Paola“…For two of these proteins, Laminin-C2 and Pentraxin-3, the plasma levels were significantly higher in patients than in healthy donors, and their good laboratory performance makes them two promising biomarkers of pancreatic cancer. ABSTRACT: KRAS mutations characterize pancreatic cell transformation from the earliest stages of carcinogenesis, and are present in >95% of pancreatic ductal adenocarcinoma (PDAC) cases. …”
Publicado 2022
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194824por Karen-Ng, Lee Peng, Ahmad, Usama Sharif, Gomes, Luis, Hunter, Keith David, Wan, Hong, Hagi-Pavli, Eleni, Parkinson, Eric Kenneth“…Surprisingly, ataxia telangiectasia mutated (ATM) function was not required for ePGE upregulation and was increased in expression in IPPOL keratinocytes in line with its recently reported role in telomerase function. …”
Publicado 2022
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194825“…In cancer cell lines, overexpression of 7 reported miR-17-5p targeted genes’ 3′-UTRs promoted miR-17-5p expression; meanwhile, transfection of 3′-UTRs with mutations had no significant effect. Moreover, an increase in AGO2 mRNA was associated with 3′-UTR expression as confirmed by real-time PCR. …”
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194826HIV Transmembrane Glycoprotein Conserved Domains and Genetic Markers Across HIV-1 and HIV-2 Variants“…No natural major resistance mutations to T-20 were observed. Our results show, for the first time, a complete conservation study of gp41/gp36 per variant in the largest panel of HIV variants analyzed to date, providing useful information for a more rational design of drugs, vaccines, and molecular detection tests targeting the HIV transmembrane glycoprotein.…”
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194827por Huang, Yuhong, Liu, Han, Liu, Xuena, Li, Nan, Bai, Han, Guo, Chenyang, Xu, Tian, Zhu, Lei, Liu, Chao, Xiao, Jing“…Through network topology, CXCL9, 10, 11, and CLL5 related to TAMM differentiation in the TME were identified as the key genes initiating and maintaining the immune hot phenotype in HNSCC by remarkably strengthening immune responses and infiltration. Genome wide, CASP8 mutations were found to be key to triggering immune responses in the immune hot phenotype. …”
Publicado 2022
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194828“…Furthermore, the 3-dimensional (3D) model of the mutated proteins was predicted and validated using SPARKS-X, Verify3D, and PROCHECK. …”
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194829“…IR regions showed higher variability than the SSC region and LSC region. Seven mutational hotspots were screened out, including trnK-UUU-trnQ-UGG, psbD, ndhJ-ndhK, clpP, psbH-petB, ycf1, and trnA-UGC-trnI-GAU, respectively. …”
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194830por Boyko, Alexandra I., Karlina, Irina S., Zavileyskiy, Lev G., Aleshin, Vasily A., Artiukhov, Artem V., Kaehne, Thilo, Ksenofontov, Alexander L., Ryabov, Sergey I., Graf, Anastasia V., Tramonti, Angela, Bunik, Victoria I.“…The mostly low and cell-specific flux through these pathways, and similar activities of OADH and ubiquitously expressed 2-oxoglutarate dehydrogenase (OGDH), agree with often asymptomatic phenotypes of heterozygous mutations in the DHTKD1 gene. Nevertheless, OADH/DHTKD1 are linked to impaired insulin sensitivity, cardiovascular disease risks, and Charcot-Marie-Tooth neuropathy. …”
Publicado 2022
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194831por Passet, Marie, Kim, Rathana, Gachet, Stéphanie, Sigaux, François, Chaumeil, Julie, Galland, Ava, Sexton, Thomas, Quentin, Samuel, Hernandez, Lucie, Larcher, Lise, Bergugnat, Hugo, Ye, Tao, Karasu, Nezih, Caye, Aurélie, Heizmann, Beate, Duluc, Isabelle, Chevallier, Patrice, Rousselot, Philippe, Huguet, Françoise, Leguay, Thibaut, Hunault, Mathilde, Pflumio, Françoise, Freund, Jean-Noël, Lobry, Camille, Lhéritier, Véronique, Dombret, Hervé, Domon-Dell, Claire, Soulier, Jean, Boissel, Nicolas, Clappier, Emmanuelle“…CDX2/UBTF ALL (n = 26) harbored a distinct pattern of additional alterations including 1q gain and CXCR4 activating mutations. Within adult patients with Ph(−) B-ALL enrolled in GRAALL trials, patients with CDX2/UBTF ALL (n = 17/723, 2.4%) were young (median age, 31 years) and dramatically enriched in females (male/female ratio, 0.2, P = .002). …”
Publicado 2022
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194832“…Spearman correlation analysis was performed to investigate the relationship between ARPC2 expression and tumor mutational burden (TMB), DNA methyltransferases, microsatellite instability (MSI), immune-related genes, and mismatch repairs (MMRs). …”
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194833por Wang, Kang, Li, Lun, Franch‐Expósito, Sebastià, Le, Xin, Tang, Jun, Li, Qing, Wu, Qianxue, Bassaganyas, Laia, Camps, Jordi, Zhang, Xiang, Li, Hongyuan, Foukakis, Theodoros, Xiang, Tingxiu, Wu, Jiong, Ren, Guosheng“…DNA methylation (HM450) data and methylation‐specific PCR indicated that the cg18629132 locus in the MKI67 promoter was hypermethylated in grade I/II cases and normal tissue, but hypomethylated in grade III cases or triple‐negative breast cancer, resulting in higher expression of MKI67. Mutations in ESR1 and TP53 were detected in post‐endocrine treatment metastatic samples at a higher rate than in treatment‐naive tumors in grade III cases. …”
Publicado 2021
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194834por Salvage, Samantha C., Huang, Christopher L.-H., Fraser, James A., Dulhunty, Angela F.“…It has been introduced as a clinical antiarrhythmic agent for catecholaminergic polymorphic ventricular tachycardia (CPVT), a condition most commonly associated with gain-of-function RyR2 mutations. Current debate concerns both cellular mechanisms of its antiarrhythmic action and molecular mechanisms of its RyR2 actions. …”
Publicado 2022
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194835por Desai, Sanket, Mishra, Rohit, Ahmad, Suhail, Hait, Supriya, Joshi, Asim, Dutt, Amit“…We show an average depletion of 3.44% variants per paired tumor and significantly higher depletion (P-value < 0.001) for orphan tumors (4.21%), demonstrating the utility of the rare, unique variants found in the ethnic-specific variant datasets in reducing the false-positive somatic mutations. TMC-SNPdb 2.0 is the most exhaustive open-source reference database of germline variants occurring across 1800 Indian individuals to analyze cancer genomes and other genetic disorders. …”
Publicado 2022
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194836por Liang, Frank, Nilsson, Lisa M., Byvald, Fabian, Rezapour, Azar, Taflin, Helena, Nilsson, Jonas A., Yrlid, Ulf“…These CRLMs also displayed mutated KRAS, which enabled trametinib-mediated inhibition of MEK. …”
Publicado 2022
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194837por Lee, Yong-Jae, Nam, Eun-Ji, Kim, Sunghoon, Kim, Young-Tae, Itkin-Ansari, Pamela, Kim, Sang-Wun“…We analyzed copy number alterations, mutations, methylations, and mRNA expressions of ID 1–4 and E2A using The Cancer Genome Atlas data of 570 ovarian serous cystadenocarcinoma patients. …”
Publicado 2022
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194838por Yuan, Ming, Eberhart, Charles G., Pratilas, Christine A., Blakeley, Jaishri O., Davis, Christine, Stojanova, Marija, Reilly, Karlyne, Meeker, Alan K., Heaphy, Christopher M., Rodriguez, Fausto J.“…ABSTRACT: Subsets of Neurofibromatosis Type 1 (NF1)-associated solid tumors have been shown to display high frequencies of ATRX mutations and the presence of alternative lengthening of telomeres (ALT). …”
Publicado 2022
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194839“…Hypoxia-related mechanisms based on tumor mutational burden (TMB), the immune activity, and therapeutic value were also performed to adequately dig deeper into the clinical value of hypoxia-related genes. …”
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194840por He, Dongchang, Wang, Xiyue, Wu, Huiguang, Wang, Xiaoquan, Yan, Yayao, Li, Yang, Zhan, Tiansong, Hao, Xiaoli, Hu, Jiao, Hu, Shunlin, Liu, Xiaowen, Ding, Chan, Su, Shuo, Gu, Min, Liu, Xiufan“…Our findings demonstrate that frequent reassortment, particular reassorted patterns, and adaptive mutations shaped the H7N9 viral genetic diversity and evolution. …”
Publicado 2022
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