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195321“…We developed a new computational strategy to accelerate conformational transitions through the use of targeted protein mutations. Using this methodology, the mean unsigned error (MUE) of binding affinity prediction were reduced from 1.44 to 0.89 kcal/mol on a set of 14 compounds. …”
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195322por Xiong, Ye, Qi, Yanhua, Pan, Ziwen, Wang, Shaobo, Li, Boyan, Feng, Bowen, Xue, Hao, Zhao, Rongrong, Li, Gang“…RESULTS: We comprehensively assessed genomic mutations, expression dysregulation, prognosis and immunotherapeutic response across 33 human cancer samples and showed that TMSB10 is specifically overexpressed in almost all types of cancer tissues. …”
Publicado 2022
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195323“…Advanced/metastatic basal and cutaneous squamous cell cancers often have a high tumor mutational burden (which predicts immunotherapy response); immune checkpoint blockade with cemiplimab, a programmed cell death protein 1 (PD1) inhibitor, is now approved for these malignancies. …”
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195324por Ho, Ha Phan Thanh, Vo, Di Ngoc Kha, Lin, Tung-Yi, Hung, Jo-Ning, Chiu, Ya-Hui, Tsai, Ming-Han“…SARS-CoV-2 variants with spike mutations are frequently endowed with a strong capability to escape vaccine-elicited protection. …”
Publicado 2022
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195325por Araujo, Paula B., Carvallo, Mirna S., Vidal, Ana P., Nascimento, João B., Wo, Julia M., Naliato, Erika O., Cunha Neto, Silvio H., Conceição, Flavia L., Fontes, Rosita, de Lima, Vinicius V., Carvalho, Denise P., Soares, Paula, Lima, Jorge, Lourenço, Delmar M., Violante, Alice Helena D.“…Two nonsyndromic patients (cases 1 and 2) were negative to germline mutations in genes VHL, SDHB, SDHC, SDHD, SDHAF2, TMEM127, and MAX, while the third case (case 3) had clinical diagnosis of neurofibromatosis syndrome. …”
Publicado 2022
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195326por Ballotta, Laura, Simonetti, Omar, D’Agaro, Pierlanfranco, Segat, Ludovica, Koncan, Raffaella, Martinez-Orellana, Pamela, Dattola, Federica, Orsini, Emanuele, Marcello, Alessandro, Dal Monego, Simeone, Licastro, Danilo, Misin, Andrea, Mohamed, Sara, Sbisà, Eugenio, Lucchini, Elisa, De Sabbata, Giovanni Maria, Zaja, Francesco, Luzzati, Roberto“…The analysis of the viral genome in the period elapsed from the time of COVID-19 diagnosis and the administration of mAbs showed the development of new mutations, especially in the S gene. The genome variations observed during the time suggest a role of persistent SARS-CoV-2 infection as a possible source for the development of viral variants. …”
Publicado 2022
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195327por Chio, Adriano, Moglia, Cristina, Canosa, Antonio, Manera, Umberto, Grassano, Maurizio, Vasta, Rosario, Palumbo, Francesca, Gallone, Salvatore, Brunetti, Maura, Barberis, Marco, De Marchi, Fabiola, Dalgard, Clifton, Chia, Ruth, Mora, Gabriele, Iazzolino, Barbara, Peotta, Laura, Traynor, Bryan, Corrado, Lucia, D'Alfonso, Sandra, Mazzini, Letizia, Calvo, Andrea“…METHODS: The study population includes 1330 patients with ALS identified through the Piemonte and Valle d’Aosta Register for ALS, diagnosed between 2007 and 2019 and not carrying C9orf72, SOD1, TARDBP and FUS mutations. Controls were 1274 age, sex and geographically matched Italian subjects, identified through patients’ general practitioners. …”
Publicado 2022
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195328por Micán, Rafael, de Gea Grela, Alejandro, Cadiñanos, Julen, de Miguel, Rosa, Busca, Carmen, Bernardino, Jose I., Valencia, Eulalia, Montes, Maria Luisa, Montejano, Rocío, Moreno, Victoria, Pérez Valero, Ignacio, Serrano, Lucía, González-García, Juan, Arribas, Jose R., Martín-Carbonero, Luz“…INTRODUCTION: Few clinical trials and cohort studies have evaluated the efficacy of bictegravir/emtricitabine/tenofovir alafenamide (B/F/TAF) in people with HIV (PWH) with preexisting M184V/I or other nucleos(t)ide reverse transcriptase inhibitor (NRTI) resistance-associated mutations (RAMs). Real-world data are also scarce. …”
Publicado 2022
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195329por Khamadi, Samoel Ashimosi, Opanda, Silvanos, Symekher, Samwel Lifumo, Limbaso, Samson Konongoi, Langat, Solomon, Cirindi, Josyline Kaburi, Mwangi, Milkah, Mwikwabe, Nicholas, Okeyo, Seth, Koskei, Edith, Mutisya, James, Owaka, Samwel, Nyunja, Albert, Koka, Hellen, Wadegu, Meshack, Chitechi, Esther, Achilla, Rachel, Majanja, Janet Masitsa, Kanyara, Lucy, Amukoye, Evans, Bulimo, Wallace“…The VOC have acquired adaptive mutations that have enhanced virus transmissibility, increased virulence, and reduced response to neutralizing antibodies. …”
Publicado 2022
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195330por Srinivasan, Subhashini, Ghosh, Chaitali, Das, Shrestha, Thakare, Aditi, Singh, Siddharth, Ganesh, Apoorva, Mahawar, Harsh, Jaisimha, Aadhya, Krishna, Mohanapriya, Chattopadhyay, Aritra, Borah, Rishima, Singh, Vikrant, M, Soumya, Kumar, Naveen, Kumar, Sampath, Swain, Sunita, Subramani, Suresh“…Comparative genomics of the three type-forms with that of IndInt, reveals structurally disruptive mutations in Eiger gene in all three strains of the type-form, suggesting compromised innate immunity in the type-form as the likely cause of high vectorial capacity in these strains. …”
Publicado 2022
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195331“…All LSM genes were identified as genomic mutations, whereas alteration of LSM2 (p = 0.0153) significantly affected the overall survival in patients with SKCM. …”
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195332por Zhao, Linghao, Wang, Yuyouye, Tian, Tao, Rao, Xinjie, Dong, Wei, Zhang, Jinmin, Yang, Yuan, Tao, Qifei, Peng, Fang, Shen, Chenhang, Wang, Songbo, Liu, Hui, Zeng, Xi, Zhou, Weiping“…CONCLUSION: Comparative analysis demonstrates numerous newly discovered mutational events in ICC and CHC resulting from HBV insertions in the host genome. …”
Publicado 2022
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195333por He, Yukun, Wang, Yifan, Ma, Xinqian, Zhao, Lili, Guan, Jie, Zhao, Jin, Yu, Wenyi, Li, Yanjun, Ni, Wentao, Gao, Zhancheng“…CONCLUSION: PER-1 production, iron transport system downregulation, and mutations in PBPs may synergistically impart high-level resistance to CFDC in CR-AB.…”
Publicado 2022
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195334por Santos-Rebouças, Cíntia Barros, Piergiorge, Rafael Mina, dos Santos Ferreira, Cristina, Seixas Zeitel, Raquel de, Gerber, Alexandra Lehmkuhl, Rodrigues, Marta Cristine Felix, Guimarães, Ana Paula de Campos, Silva, Rodrigo Moulin, Fonseca, Adriana Rodrigues, Souza, Rangel Celso, de Souza, Ana Tereza Antunes Monteiro, Rossi, Átila Duque, Porto, Luís Cristóvão de Moraes Sobrino, Cardoso, Cynthia Chester, de Vasconcelos, Ana Tereza Ribeiro“…Protein–Protein Interactions (PPIs) among the products of the mutated genes revealed an integrated network, enriched for immune and inflammatory response mechanisms with some of the direct partners representing gene products previously associated with MIS-C and Kawasaki disease (KD). …”
Publicado 2022
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195335por Duan, Yanlong, Gao, Huixia, Zhou, Chunju, Jin, Ling, Yang, Jing, Huang, Shuang, Zhang, Meng, Zhang, Yonghong, Wang, Tianyou“…There were 7 patients (38.9%, one case in chemotherapy group and six cases in immunotherapy group) with HPS and 4/5 screened patients (80%) with positive HAVCR2 gene mutations. The median follow-up was 17 months. CONCLUSION: The prognosis of SPTCL is relatively good. …”
Publicado 2022
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195336por Zhang, Mingyu, Yang, Jianhui, Bai, Yiran, Zhu, Hui, Wang, Changshuang, Zhang, Lu, Xu, Jin, Lu, Mingxia, Zhang, Xiaoxiao, Xiao, Zhanpei, Ma, Yating, Wang, Yan, Li, Xiaolei, Wang, Dongyan, Zhu, Shuangli, Yan, Dongmei, Xu, Wenbo, Zhang, Yong, Zhang, Yanyang“…Nucleotide substitutions, including U → C (472) and C → U (2493), have been identified, both of which are frequently observed as reversion mutations in neurovirulent type 3 poliovirus. A unique aspect of this case is that the patient had been vaccinated with four doses of inactive polio vaccine, and the serum neutralizing antibody for Sabin types 1 and 3 were 1∶16 and 1∶512, respectively. …”
Publicado 2022
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195337por Oh, Djin-Ye, Hölzer, Martin, Paraskevopoulou, Sofia, Trofimova, Maria, Hartkopf, Felix, Budt, Matthias, Wedde, Marianne, Richard, Hugues, Haldemann, Berit, Domaszewska, Teresa, Reiche, Janine, Keeren, Kathrin, Radonić, Aleksandar, Calderón, Julia Patricia Ramos, Smith, Maureen Rebecca, Brinkmann, Annika, Trappe, Kathrin, Drechsel, Oliver, Klaper, Kathleen, Hein, Sascha, Hildt, Eberhard, Haas, Walter, Calvignac-Spencer, Sébastien, Semmler, Torsten, Dürrwald, Ralf, Thürmer, Andrea, Drosten, Christian, Fuchs, Stephan, von Kleist, Max, Kröger, Stefan, Wolff, Thorsten“…Phylogenetic analysis confirmed variant assignments. Multiple mutations of concern emerged during the observation period. …”
Publicado 2022
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195338por Hu, Longbo, Tang, Yongjie, Mei, Lingling, Liang, Mengdi, Huang, Jinxian, Wang, Xufei, Wu, Liping, Jiang, Jiajing, Li, Leyi, Long, Fei, Xiao, Jing, Tan, Long, Lu, Shaohua, Peng, Tao“…In this study, through constructing a series of mutations of the CT of the S protein and analyzing their impact on the packaging of the SARS-CoV-2 pseudovirus and live SARS-CoV-2 virus, we identified V(1264)L(1265) as a new intracellular targeting motif in the CT of the S protein, that regulates the transport and subcellular localization of the spike protein through the interactions with cytoskeleton and vesicular transport-related proteins, ARPC3, SCAMP3, and TUBB8, thereby modulating SARS-CoV-2 pseudovirus and live SARS-CoV-2 virion assembly. …”
Publicado 2023
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195339por Winkelmann, Ria, Bankov, Katrin, Döring, Claudia, Cinatl, Jaroslav, Grothe, Sebastian, Rothweiler, Florian, Michaelis, Martin, Schmitt, Christina, Wild, Peter J., Demes, Melanie, Cinatl, Jindrich, Vallo, Stefan“…RESULTS AND CONCLUSIONS: The chemo-resistant sublines differed in their mutational landscapes. UKF-PEC-1(r)CDDP(2500) was characterized by an increased HRD score, which is supposed to be associated with increased PARP inhibitor and immune checkpoint inhibitor sensitivity in cancer. …”
Publicado 2022
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195340por Rodríguez-Escribano, David, Pliego-Magán, Rocío, de Salas, Felipe, Aza, Pablo, Gentili, Patrizia, Ihalainen, Petri, Levée, Thomas, Meyer, Valérie, Petit-Conil, Michel, Tapin-Lingua, Sandra, Lecourt, Michael, Camarero, Susana“…RESULTS: Through systematic enzyme engineering, combining enzyme-directed evolution and rational design, we changed the optimal pH of the laccase for oxidation of lignin phenols from acidic to basic, enhanced the catalytic activity at alkaline pH and increased the thermal tolerance of the enzyme by accumulating up to eight mutations in the protein sequence. The extremophilic laccase variants show maximum activity at 70 °C and oxidize kraft lignin at pH 10. …”
Publicado 2022
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