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2741por Hannuksela, Matias, Stattin, Eva-Lena, Klar, Joakim, Ameur, Adam, Johansson, Bengt, Sörensen, Karen, Carlberg, Bo“…RESULTS: Exome sequencing led to the identification of a 2-bp deletion in MYLK (c3272_3273del, p.Ser1091*) that led to a premature stop codon and nonsense-mediated decay. Eleven people were mutation carriers and eight people were non-carriers. …”
Publicado 2016
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2742“…In Paramecium, ultra-short introns with length divisible by three (3n) are under strong evolutionary pressure and have a high frequency of in-frame stop codons, which, in the case of intron retention, cause premature termination of mRNA translation and consequent degradation of the mis-spliced mRNA by the nonsense-mediated decay mechanism. Here, we analyzed introns in five genera of Ciliates, Paramecium, Tetrahymena, Ichthyophthirius, Oxytricha, and Stylonychia. …”
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2743por Engel, Andrew G., Selcen, Duygu, Shen, Xin-Ming, Milone, Margherita, Harper, C. Michel“…Exome sequencing identified a homozygous nonsense mutation in the N-terminal domain of MUNC13-1 (UNC13A) truncating the protein after 101 residues. …”
Publicado 2016
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2744por Hernandez, Ciria C., Klassen, Tara L., Jackson, Laurel G., Gurba, Katharine, Hu, Ningning, Noebels, Jeffrey L., Macdonald, Robert L.“…In addition, 12 out of 17 variants mapped along the β+/α- GABA binding interface, were associated with reduction in channel gating and were predicted to cause structural rearrangements of the receptor by in silico simulations. Missense or nonsense mutations of GABRA1, GABRB3 and GABRG2 primarily impair subunit biogenesis. …”
Publicado 2016
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2745por Wang, Cui, Lu, Jingru, Lang, Yanhua, Liu, Ting, Wang, Xiaoling, Zhao, Xiangzhong, Shao, Leping“…It demonstrated that in each of three patients, a previously reported nonsense mutation p.R333(*) was in cis with a novel missense mutation p.M49L in the minor allele characterized by the polymorphism of 74-bp duplication in intron 1, while the other novel missense mutation p.N72I was in trans with both p.R333(*) and P.M49L in the major allele. …”
Publicado 2016
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2746por Kim, Young-Ho, Hong, Eun-Kyung, Kong, Sun-Young, Han, Sung-Sik, Kim, Seoung-Hoon, Rhee, Je-Keun, Hwang, Soo-Kyung, Park, Sang-Jae, Kim, Tae-Min“…We also show that transcriptome sequencing can be used for expression-based ICC categorization but the somatic mutation calling from the transcriptome can be heavily influenced by the gene expression level and potentially, by posttranscriptional modification such as nonsense mediated decay. Along with a substantial level of mutational heterogeneity of ICC genomes, our study reveals previously unrecognized two ICC classes defined by relative abundance of somatic mutations over CNAs or vice versa, which should be considered in the selection of genotyping platforms and sensitive screening of targets for ICC therapeutics.…”
Publicado 2016
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2747“…Mutation types included missense mutations (30.06%), nonsense mutations (17.18%), frameshift mutations (30.67%), in-frame deletions (2.45%), intronic mutations (17.79%), and exonic rearrangement (1.84%). …”
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2748por Vexler, Karina, Cymerman, Miryam A., Berezin, Irina, Fridman, Adi, Golani, Linoy, Lasnoy, Michal, Saul, Helen, Shaul, Orit“…Nonsense-mediated mRNA decay (NMD) is a eukaryotic RNA surveillance mechanism that degrades aberrant transcripts and controls the levels of many normal mRNAs. …”
Publicado 2016
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2749por Corton, M., Avila-Fernández, A., Campello, L., Sánchez, M., Benavides, B., López-Molina, M. I., Fernández-Sánchez, L., Sánchez-Alcudia, R., da Silva, L. R. J., Reyes, N., Martín-Garrido, E., Zurita, O., Fernández-San José, P., Pérez-Carro, R., García-García, F., Dopazo, J., García-Sandoval, B., Cuenca, N., Ayuso, C.“…Using a combination of homozygosity mapping, whole-exome and targeted next-generation sequencing, we found a novel homozygous nonsense mutation in SAMD11 in five individuals diagnosed with adult-onset RP from two unrelated consanguineous Spanish families. …”
Publicado 2016
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2750por Su, Xingyun, Wang, Weibin, Ruan, Guodong, Liang, Min, Zheng, Jing, Chen, Ye, Wu, Huiling, Fahey, Thomas J., Guan, Minxin, Teng, Lisong“…Thirty-three variations including seven nonsense, 11 frameshift and 15 non-synonymous variations selected by bioinformatic software were regarded as pathogenic. …”
Publicado 2016
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2751por Choi, Rihwa, Park, Hyung-Doo, Yang, Mina, Ki, Chang-Seok, Lee, Soo-Youn, Kim, Jong-Won, Song, Junghan, Chang, Yun Sil, Park, Won Soon“…WES revealed compound heterozygous pathogenic variants in the CPS1 gene: one novel nonsense pathogenic variant of c.580C>T (p.Gln194*) and one known pathogenic frameshift pathogenic variant of c.1547delG (p.Gly516Alafs*5), which was previously reported in Japanese patients with CPS1D. …”
Publicado 2017
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2752por Bahena-Bahena, D., López-Valdez, J., Raymond, K., Salinas-Marín, R., Ortega-García, A., Ng, B.G., Freeze, H.H., Ruíz-García, M., Martínez-Duncker, I.“…Mutational screening of ATP6V0A2 using cDNA and genomic DNA revealed in Patient 1 a previously reported homozygous nonsense mutation c.187C>T (p.R63X) associated with a novel clinical finding of a VSD. …”
Publicado 2014
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2753“…BACKGROUND: It is not fully understood how a termination codon is recognized as premature (PTC) by the nonsense-mediated decay (NMD) machinery. This is particularly true for transcripts lacking an exon junction complex (EJC) along their 3’ untranslated region (3’UTR), and thus degrade through the EJC-independent NMD pathway. …”
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2754por Bourdeau, Isabelle, Grunenwald, Solange, Burnichon, Nelly, Khalifa, Emmanuel, Dumas, Nadine, Binet, Marie-Claire, Nolet, Serge, Gimenez-Roqueplo, Anne-Paule“…The same heterozygous nonsense mutation at codon 133 of exon 5 of the SDHC gene (c.397C>T, p.…”
Publicado 2016
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2755por Li, Ying, Bor, Yeou-cherng, Fitzgerald, Mark P., Lee, Kevin S., Rekosh, David, Hammarskjold, Marie-Louise“…The NXF1 gene also regulates expression of its own intron-containing RNA through the use of a functional CTE within intron 10. mRNA containing this intron is exported to the cytoplasm, where it can be translated into the 356–amino acid short Nxf1(sNxf1) protein, despite the fact that it is a prime candidate for nonsense-mediated decay (NMD). Here we demonstrate that sNxf1 is highly expressed in nuclei and dendrites of hippocampal and neocortical neurons in rodent brain. …”
Publicado 2016
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2756por Rea, Gillian, Homfray, Tessa, Till, Jan, Roses-Noguer, Ferran, Buchan, Rachel J., Wilkinson, Sam, Wilk, Alicja, Walsh, Roddy, John, Shibu, McKee, Shane, Stewart, Fiona J., Murday, Victoria, Taylor, Robert W., Ashworth, Michael, Baksi, A. John, Daubeney, Piers, Prasad, Sanjay, Barton, Paul J.R., Cook, Stuart A., Ware, James S.“…Here we report an additional case of histiocytoid CM, which carries a de novo nonsense variant in NDUFB11 (ENST00000276062.8: c.262C > T; p.…”
Publicado 2017
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2757por Schafer, Sebastian, de Marvao, Antonio, Adami, Eleonora, Fiedler, Lorna R, Ng, Benjamin, Khin, Ester, Rackham, Owen J L, van Heesch, Sebastiaan, Pua, Chee J, Kui, Miao, Walsh, Roddy, Tayal, Upasana, Prasad, Sanjay K, Dawes, Timothy J W, Ko, Nicole S J, Sim, David, Chan, Laura L, Chin, Calvin W L, Mazzarotto, Francesco, Barton, Paul J, Kreuchwig, Franziska, de Kleijn, Dominique P V, Totman, Teresa, Biffi, Carlo, Tee, Nicole, Rueckert, Daniel, Schneider, Valentin, Faber, Allison, Regitz-Zagrosek, Vera, Seidman, Jonathan G, Seidman, Christine E, Linke, Wolfgang A, Kovalik, Jean-Paul, O’Regan, Declan Patrick, Ware, James S, Hubner, Norbert, Cook, Stuart A“…Ribosomal profiling in rat revealed the translational footprint of premature stop codons in Ttn, TTNtv position-independent nonsense-mediated degradation of the mutant allele and a signature of perturbed cardiac metabolism. …”
Publicado 2016
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2758“…While 9.6% of the students thought CAM to be nonsense, 10.8% thought that the methods of CAM should be tried before consulting a doctor. …”
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2759por Zhao, Jiawei, Sun, Yue, Huang, Yin, Song, Fan, Huang, Zengshu, Bao, Yufang, Zuo, Ji, Saffen, David, Shao, Zhen, Liu, Wen, Wang, Yongbo“…Among six representative LUAD-associated RBM10 mutations, one nonsense and one frameshift mutation caused loss-of-function as expected, whereas four missense mutations differentially affected RBM10-mediated splicing. …”
Publicado 2017
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2760por Kiiski, K., Lehtokari, V-L., Manzur, A.Y., Sewry, C., Zaharieva, I., Muntoni, F., Pelin, K., Wallgren-Pettersson, C.“…All previously identified disease-causing variants are point mutations including missense, nonsense and splice-site variants. The aim of the study was to identify the disease-causing gene in this patient and verify the NM diagnosis. …”
Publicado 2015
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