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3481por Theisen, J. Graham, Sundaram, Viji, Filchak, Mary S., Chorich, Lynn P., Sullivan, Megan E., Knight, James, Kim, Hyung-Goo, Layman, Lawrence C.“…After filtering, 441 variants in 421 genes remained for further consideration, including 21 nonsense, 28 frameshift, 13 splice-region, and 225 missense variants. …”
Publicado 2019
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3482“…The pathogenesis was investigated via minigene and nonsense-mediated mRNA decay (NMD) by experiments in vitro. …”
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3483por Cho, Ahra, Lima de Carvalho, Jose Ronaldo, Tanaka, Akemi J., Jauregui, Ruben, Levi, Sarah R., Bassuk, Alexander G., Mahajan, Vinit B., Tsang, Stephen H.“…RESULTS: Subsequent genetic testing guided by fundoscopy findings identified the following variant types causing retinitis pigmentosa that were not detected by WES: frameshift deletion and nonsense variants in the RPGR gene, 353-bp Alu repeat insertions in the MAK gene, and large exonic deletion variants in the EYS and PRPF31 genes. …”
Publicado 2020
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3484por Tarrasó, Guillermo, Real-Martinez, Alberto, Parés, Marta, Romero-Cortadellas, Lídia, Puigros, Laura, Moya, Laura, de Luna, Noemí, Brull, Astrid, Martín, Miguel Angel, Arenas, Joaquin, Lucia, Alejandro, Andreu, Antoni L., Barquinero, Jordi, Vissing, John, Krag, Thomas O., Pinós, Tomàs“…As these plasmids encode murine Pygm cDNA without any intron sequence, their transfection in cells would allow for analysis of the efficacy of read-through agents with no concomitant nonsense-mediated decay interference. The third model consisted of skeletal muscle cultures derived from the McArdle mouse model (knock-in for the p.R50X mutation in the Pygm gene). …”
Publicado 2020
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3485por Belman, Jonathan P., Meng, Wenzhao, Wang, Hong Yi, Li, Jie, Strauser, Honore T., Rosenfeld, Aaron M., Zhang, Qian, Prak, Eline T. Luning, Wasik, Mariusz“…Of note, a TAF3 gene mutation was shared by normal, FL, and B-ALL/LBL tissue. A KMT2D nonsense mutation was identified in both FL and B-ALL/LBL and therefore may have contributed directly to lymphomagenesis. …”
Publicado 2020
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3486por Ceccarini, Giovanni, Magno, Silvia, Pelosini, Caterina, Ferrari, Federica, Sessa, Maria Rita, Scabia, Gaia, Maffei, Margherita, Jéru, Isabelle, Lascols, Olivier, Vigouroux, Corinne, Santini, Ferruccio“…The first patient exhibited a novel homozygous nonsense c.430 C > T AGPAT2 mutation (p.Gln144(*)) predicting the synthesis of a truncated enzyme of approximately half of the proper size. …”
Publicado 2020
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3487por Deng, Jianlian, Zhang, Haoqing, Li, Caiyun, Huang, Hui, Liu, Saijun, Yang, Huanming, Xie, Kaili, Wang, Qiong, Lei, Dongzhu, Wu, Jing“…Additionally, targeted-region-capture-based DMD gene sequencing and Sanger verification confirmed a widely reported pathogenic heterozygous nonsense mutation (NM_004006, c.9100C>T, p.Arg3034Ter) in the dystrophin-coding gene named DMD. …”
Publicado 2020
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3488por Hiebert, Colin W., Moscou, Matthew J., Hewitt, Tim, Steuernagel, Burkhard, Hernández-Pinzón, Inma, Green, Phon, Pujol, Vincent, Zhang, Peng, Rouse, Matthew N., Jin, Yue, McIntosh, Robert A., Upadhyaya, Narayana, Zhang, Jianping, Bhavani, Sridhar, Vrána, Jan, Karafiátová, Miroslava, Huang, Li, Fetch, Tom, Doležel, Jaroslav, Wulff, Brande B. H., Lagudah, Evans, Spielmeyer, Wolfgang“…The gene encodes Med15, a subunit of the Mediator Complex, a conserved protein complex in eukaryotes that regulates expression of protein-coding genes. Nonsense mutations in Med15b.D result in expression of stem rust resistance. …”
Publicado 2020
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3489por Wang, Xi, Han, Lin, Wang, Xiao-Yan, Wang, Jian-Hong, Li, Xiao-Meng, Jin, Chun-Hua, Wang, Lin“…Mutation p.Y430X is nonsense, leading to a truncated protein. Mutation p.T693P is located at a highly conserved region, and thus the polar-to-non-polar substitution presumably affects the structure and function of COG5. …”
Publicado 2020
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3490por Chen, Yin-Huai, Grigelioniene, Giedre, Newton, Phillip T., Gullander, Jacob, Elfving, Maria, Hammarsjö, Anna, Batkovskyte, Dominyka, Alsaif, Hessa S., Kurdi, Wesam I.Y., Abdulwahab, Firdous, Shanmugasundaram, Veerabahu, Devey, Luke, Bacrot, Séverine, Brodszki, Jana, Huber, Celine, Hamel, Ben, Gisselsson, David, Papadogiannakis, Nikos, Jedrycha, Katarina, Gürtl-Lackner, Barbara, Chagin, Andrei S., Nishimura, Gen, Aschenbrenner, Dominik, Alkuraya, Fowzan S., Laurence, Arian, Cormier-Daire, Valérie, Uhlig, Holm H.“…We identified essential loss-of-function variants in IL6ST (a homozygous nonsense variant and a homozygous intronic splice variant with exon skipping). …”
Publicado 2020
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3491por Phillips, John W., Pan, Yang, Tsai, Brandon L., Xie, Zhijie, Demirdjian, Levon, Xiao, Wen, Yang, Harry T., Zhang, Yida, Lin, Chia Ho, Cheng, Donghui, Hu, Qiang, Liu, Song, Black, Douglas L., Witte, Owen N., Xing, Yi“…We also establish a role for Myc in regulating RNA splicing by controlling the incorporation of nonsense-mediated decay-determinant exons in genes encoding RNA binding proteins.…”
Publicado 2020
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3492por Collin, G. B., Won, J., Krebs, M. P., Hicks, W. J., Charette, J. R., Naggert, J. K., Nishina, P. M.“…Here, we identified a nonsense mutation in the Eml1 gene in a novel murine model, tvrm360, displaying subcortical heterotopia, hydrocephalus and disorganization of retinal architecture. …”
Publicado 2020
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3493por Park, Joonhong, Yoo, Han Mo, Sul, Hae Jung, Shin, Soyoung, Lee, Seung Woo, Kim, Jeong Goo“…Based on the mutation types, majority of the variants carried missense mutations (60%, 26/43), followed by 8 frameshifts, 6 nonsense, 1 stop-loss, and 2 amplifications. CONCLUSIONS: Our study confirmed the advantage of using targeted NGS with a cancer gene panel to efficiently identify mutations associated with GISTs. …”
Publicado 2020
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3494por Post, Kathryn L., Belmadani, Manuel, Ganguly, Payel, Meili, Fabian, Dingwall, Riki, McDiarmid, Troy A., Meyers, Warren M., Herrington, Caitlin, Young, Barry P., Callaghan, Daniel B., Rogic, Sanja, Edwards, Matthew, Niciforovic, Ana, Cau, Alessandro, Rankin, Catharine H., O’Connor, Timothy P., Bamji, Shernaz X., Loewen, Christopher J. R., Allan, Douglas W., Pavlidis, Paul, Haas, Kurt“…To fully assess the effects of 106 missense and nonsense variants of PTEN associated with autism spectrum disorder, somatic cancer and PTEN hamartoma syndrome (PHTS), we take a deep phenotypic profiling approach using 18 assays in 5 model systems spanning diverse cellular environments ranging from molecular function to neuronal morphogenesis and behavior. …”
Publicado 2020
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3495por Qiao, Suchi, Qi, Ke, Liu, Chang, Xu, Changli, Ma, Jun, Xu, Xinmin, Li, Cheng, Wang, Zhiwei“…LINC00511 overexpression‐treated (OE‐LINC00511) and nonsense overexpression‐treated (OE‐control) MG‐63 and Saos‐2 cells were cultured, followed by the assessment of cell proliferation, apoptosis, migration, and invasion. …”
Publicado 2020
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3496por Cho, Sung Kweon, Kim, Beomsu, Myung, Woojae, Chang, Yoosoo, Ryu, Seungho, Kim, Han-Na, Kim, Hyung-Lae, Kuo, Po-Hsiu, Winkler, Cheryl A., Won, Hong-Hee“…Despite the overall similar effect sizes of variants in Korean and European populations, the proportion of variance for SUA levels explained by the variants was greater in the Korean population. A rare, nonsense variant SLC22A12 p.W258X showed the most significant association with reduced SUA levels, and PRSs of common variants associated with SUA levels were significant in multiple Korean cohorts. …”
Publicado 2020
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3497“…The control group was transfected with a nonsense sequence, while the siRNA group was transfected with si-HOTAIR. …”
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3498por Fernandes Júnior, Gerardo Alves, de Oliveira, Henrique Nunes, Carvalheiro, Roberto, Cardoso, Diercles Francisco, Fonseca, Larissa Fernanda Simielli, Ventura, Ricardo Vieira, de Albuquerque, Lucia Galvão“…We identified 400 genes that comprised both, a SNP and an INDEL, of high functional impact on proteins (i.e. variants that cause protein truncation, loss of function or triggering nonsense-mediated decay). Among these, we highlight the following genes: BoLA, associated with cattle immune response to infections and reproduction aspects; HSPA8, DNAJC27, and DNAJC28, involved with thermoregulatory protective mechanisms in mammals; and many olfactory signaling pathway related genes that are important genetic factors in the evolution of mammalian species. …”
Publicado 2020
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3499por Hara, Yuko, Mizobe, Yoshitaka, Inoue, Yukiko U., Hashimoto, Yasumasa, Motohashi, Norio, Masaki, Yoshiaki, Seio, Kohji, Takeda, Shin’ichi, Nagata, Tetsuya, Wood, Matthew J. A., Inoue, Takayoshi, Aoki, Yoshitsugu“…Duchenne muscular dystrophy (DMD) is a fatal X-linked disorder caused by nonsense or frameshift mutations in the DMD gene. Among various treatments available for DMD, antisense oligonucleotides (ASOs) mediated exon skipping is a promising therapeutic approach. …”
Publicado 2020
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3500por Blackburn, Patrick R., Schultz, Matthew J., Lahner, Carrie A., Li, Dong, Bhoj, Elizabeth, Fisher, Laura J., Renaud, Deborah L., Kenney, Amy, Ibrahim, Niema, Hashem, Mais, Zain Seidahmed, Mohammed, Hasadsri, Linda, Schrier Vergano, Samantha A., Alkuraya, Fowzan S., Lanpher, Brendan C.“…Subsequent studies have identified a range of homozygous and compound heterozygous pathogenic missense, nonsense, frameshift, and splice‐site ACO2 variants in patients with a spectrum of clinical manifestations and disease severities. …”
Publicado 2020
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