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4081por Babiker, Amir MI, Al Gadi, Iman, Al-Jurayyan, Nasir AM, Al Nemri, Abdulrahman MH, Al haboob, Ali Abdu N, Al Boukai, Ahmed Amer, Al Zahrani, Ali, Habib, Hanan Ahmed“…Based on data search in Human Gene Mutation Database, 63 CYP27B1 alterations were reported: only 28.6% are protein truncating (5 nonsense, 13 frameshift insertions/deletions, 0 gross deletions), while 61.9% are non-truncating (38 missense, 1 small in-frame insertions/deletion), and 9.5% are possible protein-truncating (5 splice, 1 regulatory). …”
Publicado 2014
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4082“…We identified a novel nonsense mutation within the ‘class a’ FAD3 gene (BoFAD3-2) in these lines, which would result in the production of an encoded protein lacking 110 amino acids at its C terminus. …”
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4083The TREAT-NMD DMD Global Database: Analysis of More than 7,000 Duchenne Muscular Dystrophy Mutationspor Bladen, Catherine L, Salgado, David, Monges, Soledad, Foncuberta, Maria E, Kekou, Kyriaki, Kosma, Konstantina, Dawkins, Hugh, Lamont, Leanne, Roy, Anna J, Chamova, Teodora, Guergueltcheva, Velina, Chan, Sophelia, Korngut, Lawrence, Campbell, Craig, Dai, Yi, Wang, Jen, Barišić, Nina, Brabec, Petr, Lahdetie, Jaana, Walter, Maggie C, Schreiber-Katz, Olivia, Karcagi, Veronika, Garami, Marta, Viswanathan, Venkatarman, Bayat, Farhad, Buccella, Filippo, Kimura, En, Koeks, Zaïda, van den Bergen, Janneke C, Rodrigues, Miriam, Roxburgh, Richard, Lusakowska, Anna, Kostera-Pruszczyk, Anna, Zimowski, Janusz, Santos, Rosário, Neagu, Elena, Artemieva, Svetlana, Rasic, Vedrana Milic, Vojinovic, Dina, Posada, Manuel, Bloetzer, Clemens, Jeannet, Pierre-Yves, Joncourt, Franziska, Díaz-Manera, Jordi, Gallardo, Eduard, Karaduman, A Ayşe, Topaloğlu, Haluk, El Sherif, Rasha, Stringer, Angela, Shatillo, Andriy V, Martin, Ann S, Peay, Holly L, Bellgard, Matthew I, Kirschner, Jan, Flanigan, Kevin M, Straub, Volker, Bushby, Kate, Verschuuren, Jan, Aartsma-Rus, Annemieke, Béroud, Christophe, Lochmüller, Hanns“…Point mutations totalled 756 (52% of small mutations) with 726 (50%) nonsense mutations and 30 (2%) missense mutations. …”
Publicado 2015
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4084por Alakus, Hakan, Yost, Shawn E, Woo, Brian, French, Randall, Lin, Grace Y, Jepsen, Kristen, Frazer, Kelly A, Lowy, Andrew M, Harismendy, Olivier“…In one additional case, loss of the entire chromosome 3 leaves a non-functional copy of BAP1 carrying a rare nonsense germline variant, thus suggesting a potential genetic predisposition in this patient. …”
Publicado 2015
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4085por Ok, Chi Young, Patel, Keyur P, Garcia-Manero, Guillermo, Routbort, Mark J, Peng, Jie, Tang, Guilin, Goswami, Maitrayee, Young, Ken H, Singh, Rajesh, Medeiros, L Jeffrey, Kantarjian, Hagop M, Luthra, Rajyalakshmi, Wang, Sa A“…Missense mutations were the most frequent, followed by frameshift and nonsense mutations. This TP53 mutation pattern was strikingly similar to that observed in de novo MDS/AML. …”
Publicado 2015
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4086por Pan, Luyuan, Shah, Arish N, Phelps, Ian G, Doherty, Dan, Johnson, Eric A, Moens, Cecilia B“…CONCLUSIONS: Using this NGS-TILLING protocol we validated 28 nonsense or splice site mutations in 20 genes, at a two-fold higher efficiency than using traditional Cel1 screening. …”
Publicado 2015
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4087por Zou, Donghua, McSweeney, Colleen, Sebastian, Aswathy, Reynolds, Derrick James, Dong, Fengping, Zhou, Yijing, Deng, Dazhi, Wang, Yonggang, Liu, Long, Zhu, Jun, Zou, Jizhong, Shi, Yongsheng, Albert, Istvan, Mao, Yingwei“…BACKGROUND: Nonsense mediated mRNA decay (NMD) is an RNA surveillance mechanism that controls RNA stability and ensures the speedy degradation of erroneous and unnecessary transcripts. …”
Publicado 2015
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4088por Virts, Elizabeth L., Jankowska, Anna, Mackay, Craig, Glaas, Marcel F., Wiek, Constanze, Kelich, Stephanie L., Lottmann, Nadine, Kennedy, Felicia M., Marchal, Christophe, Lehnert, Erik, Scharf, Rüdiger E., Dufour, Carlo, Lanciotti, Marina, Farruggia, Piero, Santoro, Alessandra, Savasan, Süreyya, Scheckenbach, Kathrin, Schipper, Jörg, Wagenmann, Martin, Lewis, Todd, Leffak, Michael, Farlow, Janice L., Foroud, Tatiana M., Honisch, Ellen, Niederacher, Dieter, Chakraborty, Sujata C., Vance, Gail H., Pruss, Dmitry, Timms, Kirsten M., Lanchbury, Jerry S., Alpi, Arno F., Hanenberg, Helmut“…The maternal duplication produced a mutant mRNA that could encode a functional protein but was degraded by nonsense-mediated mRNA decay. In the patient's hematopoietic stem cells, the maternal allele with the duplication of exons 2–6 spontaneously reverted to a wild-type allele by monoallelic recombination at the duplicated aluY repeat, thereby preventing bone marrow failure. …”
Publicado 2015
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4089por Metegnier, Gabriel, Becking, Thomas, Chebbi, Mohamed Amine, Giraud, Isabelle, Moumen, Bouziane, Schaack, Sarah, Cordaux, Richard, Gilbert, Clément“…Overall, the different degrees of EVE degradation (from none to >10 nonsense mutations) suggest that endogenization has been recurrent during the evolution of the various crustacean taxa. …”
Publicado 2015
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4090por Kelsen, Judith R., Dawany, Noor, Martinez, Alejuandro, Grochowski, Christopher M., Maurer, Kelly, Rappaport, Eric, Piccoli, David A., Baldassano, Robert N., Mamula, Petar, Sullivan, Kathleen E., Devoto, Marcella“…Whole exome sequencing revealed 1,380 nonsense and missense variants in the patient. Plausible candidate variants were not detected following analysis of filtered variants, therefore, we performed CNV analysis of the WES data, which led us to identify a de novo whole gene deletion in XIAP. …”
Publicado 2015
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4091por Fellner, Lea, Simon, Svenja, Scherling, Christian, Witting, Michael, Schober, Steffen, Polte, Christine, Schmitt-Kopplin, Philippe, Keim, Daniel A., Scherer, Siegfried, Neuhaus, Klaus“…The promoter region fused to gfp exhibits specific activities and 5’ rapid amplification of cDNA ends indicated the transcriptional start 40-bp upstream of the start codon. nog1 was strand-specifically arrested in translation by a nonsense mutation silent in citC. This Nog1-mutant showed a phenotype in competitive growth against wild type in the presence of MgCl(2). …”
Publicado 2015
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4092por Grampa, Valentina, Delous, Marion, Zaidan, Mohamad, Odye, Gweltas, Thomas, Sophie, Elkhartoufi, Nadia, Filhol, Emilie, Niel, Olivier, Silbermann, Flora, Lebreton, Corinne, Collardeau-Frachon, Sophie, Rouvet, Isabelle, Alessandri, Jean-Luc, Devisme, Louise, Dieux-Coeslier, Anne, Cordier, Marie-Pierre, Capri, Yline, Khung-Savatovsky, Suonavy, Sigaudy, Sabine, Salomon, Rémi, Antignac, Corinne, Gubler, Marie-Claire, Benmerah, Alexandre, Terzi, Fabiola, Attié-Bitach, Tania, Jeanpierre, Cécile, Saunier, Sophie“…These cases highlight a genotype-phenotype correlation, with missense and nonsense mutations associated with hypodysplasia and enlarged cystic organs, respectively. …”
Publicado 2016
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4093por Fransson, Åsa, Glaessgen, Daria, Alfredsson, Jessica, Wiman, Klas G., Bajalica-Lagercrantz, Svetlana, Mohell, Nina“…RESULTS: We observed strong synergy with APR-246 and cisplatin in all tumor samples carrying a TP53 missense mutation, while synergistic or additive effects were found in cells with wild type or TP53 nonsense mutations. Strong synergy was also observed with carboplatin or doxorubicin. …”
Publicado 2016
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4094por Hancock, D B, Reginsson, G W, Gaddis, N C, Chen, X, Saccone, N L, Lutz, S M, Qaiser, B, Sherva, R, Steinberg, S, Zink, F, Stacey, S N, Glasheen, C, Chen, J, Gu, F, Frederiksen, B N, Loukola, A, Gudbjartsson, D F, Brüske, I, Landi, M T, Bickeböller, H, Madden, P, Farrer, L, Kaprio, J, Kranzler, H R, Gelernter, J, Baker, T B, Kraft, P, Amos, C I, Caporaso, N E, Hokanson, J E, Bierut, L J, Thorgeirsson, T E, Johnson, E O, Stefansson, K“…We identified genome-wide significant association in the alpha-4 nicotinic receptor subunit (CHRNA4) gene on chromosome 20q13: lowest P=8.0 × 10(−9) across all the samples for rs2273500-C (frequency=0.15; odds ratio=1.12 and 95% confidence interval=1.08–1.17 for severe vs mild dependence). rs2273500-C, a splice site acceptor variant resulting in an alternate CHRNA4 transcript predicted to be targeted for nonsense-mediated decay, was associated with decreased CHRNA4 expression in physiologically normal human brains (lowest P=7.3 × 10(−4)). …”
Publicado 2015
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4095por Wong, Meihua, Chu, Ying-Hsia, Tan, Hwei Ling, Bessho, Hideharu, Ngeow, Joanne, Tang, Tiffany, Tan, Min-Han“…Analyzed by kindred, missense mutations were the most common (40.9%, 63/154), followed by large/complete deletions (32.5%, 50/154) and nonsense mutations (11.7%, 18/154). Compared with a previously reported study of both East Asian and non-East Asian patients, we found several key differences. …”
Publicado 2016
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4096por Tsalikis, Jessica, Pan, Qun, Tattoli, Ivan, Maisonneuve, Charles, Blencowe, Benjamin J., Philpott, Dana J., Girardin, Stephen E.“…Splicing events commonly regulated by both stresses affected genes regulating splicing and were associated with nonsense-mediated decay (NMD), suggesting that splicing is modulated by an auto-regulatory feedback loop during stress. …”
Publicado 2016
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4097por Dela Cruz, Filemon S., Diolaiti, Daniel, Turk, Andrew T., Rainey, Allison R., Ambesi-Impiombato, Alberto, Andrews, Stuart J., Mansukhani, Mahesh M., Nagy, Peter L., Alvarez, Mariano J., Califano, Andrea, Forouhar, Farhad, Modzelewski, Beata, Mitchell, Chelsey M., Yamashiro, Darrell J., Marks, Lianna J., Bender, Julia L. Glade, Kung, Andrew L.“…RESULTS: WES revealed a novel germline frameshift variant (p.E1554fs) in APC, establishing a diagnosis of Gardner syndrome, along with a somatic nonsense (p.R790*) APC mutation in the tumor. Somatic mutations in TP53, MAX, BRAF, ROS1, and RPTOR were also identified and transcriptome and immunohistochemical analyses suggested hyperactivation of the Wnt/ß-catenin and AKT/mTOR pathways. …”
Publicado 2016
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4098por Stevens, Servi J. C., van Essen, Anthonie J., van Ravenswaaij, Conny M. A., Elias, Abdallah F., Haven, Jaclyn A., Lelieveld, Stefan H., Pfundt, Rolph, Nillesen, Willy M., Yntema, Helger G., van Roozendaal, Kees, Stegmann, Alexander P., Gilissen, Christian, Brunner, Han G.“…RESULTS: In a cohort of 2172 patient–parent trios referred for routine diagnostic whole exome sequencing for ID and/or multiple congenital anomalies (MCA) in the period 2012–2016, four patients were identified who carried de novo heterozygous nonsense or frameshift mutations in the ZNF148 gene. …”
Publicado 2016
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4099por Yau, Daphne, De Franco, Elisa, Flanagan, Sarah E., Ellard, Sian, Blumenkrantz, Miriam, Mitchell, John J.“…The mutation is predicted to be pathogenic, resulting in inclusion of a premature stop codon and likely degradation of the gene transcript by nonsense-mediated decay. The abortus and the sibling with the cardiac defect were both found to have the mutation, while the father and remaining sibling were negative. …”
Publicado 2017
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4100por Al-Daghri, Nasser M., Pontremoli, Chiara, Cagliani, Rachele, Forni, Diego, Alokail, Majed S., Al-Attas, Omar S., Sabico, Shaun, Riva, Stefania, Clerici, Mario, Sironi, Manuela“…The frequency of rare missense and nonsense variants was not significantly different in T2D and controls. …”
Publicado 2017
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