“…The platform will use gamification to encourage healthy PA and eating habits; in addition, it will monitor the activities through noninvasive means, evaluate them using open-source software, and follow up through blockchain messages. …”
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“…These metrics are then implemented in an open-source tool. To demonstrate the tool, eight commonly used RDF resources were assessed, including data models in the healthcare domain (HL7 RIM, HL7 FHIR, CDISC CDASH), ontologies (DCT, SIO, FOAF, ORDO), and a metadata profile (GRDDL). …”
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“…METHODS: We investigated the cost effectiveness of providing EECC and advanced critical care in Tanzania in comparison with providing ‘no critical care’ or ‘district hospital-level critical care’ using coronavirus disease 2019 (COVID-19) as a tracer condition. We developed an open-source Markov model (https://github.com/EECCnetwork/POETIC_CEA) to estimate costs and disability-adjusted life-years (DALYs) averted, using a provider perspective, a 28-day time horizon, patient outcomes obtained from an elicitation method involving a seven-member expert group, a normative costing study, and published literature. …”
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“…Here, we demonstrate the power of citizen science, online databases, and open-source tools by using citizen-derived jellyfish reports from iNaturalist.org (accessed on 3 November 2022) in conjunction with publicly available environmental data to predict the distribution of the most conspicuous and economically relevant group of marine jellyfishes (Rhizostomeae). …”
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“…BACKGROUND: Virtual patients provide a safe way to simulate authentic clinical practice. Twine is an open-source software that can be used to create intricate virtual patient games, including elements like non-linear free text history taking and time-related changes to the game’s narrative. …”
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“…METHODS: A total of 81 patients from an open-source COVID database with confirmed COVID-19 infection were included in the study. …”
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“…We are capturing digital evidence and social media posts; we are collecting and organizing key threads using a free open-source research tool, Zotero, to trace the digital evidence of the pandemic in Saskatchewan. …”
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“…In addition, we use the summary of QC measures from 342 human and mouse shallow-sequenced gene expression profiles to specify optimal sequencing requirements to run a cell-type enrichment analysis function. CONCLUSIONS: The open-source R tool will allow examining biases and outliers over biological and technical measures, and objective selection of optimal cluster numbers before downstream analysis. scQCEA is available at https://isarnassiri.github.io/scQCEA/ as an R package. …”
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“…ForestSubtype outperforms the other two methods in terms of the distribution of clusters, internal and external metric results. The open-source code is available at https://github.com/lffyd/ForestSubtype. …”
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“…Data analysis was done by the OpenMeta Analyst open-source app, version Windows 10. RESULTS: A total of 1385 studies were identified. …”
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“…Several angleswere measured with an open-source 3D Slicer plugin using vector calculations. …”
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“…Moreover, we implement models in an open-source software tool to simultaneously define and evaluate multiple policies. …”
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“…We did this for three alternative software architectures: integrating open-source Esper and RabbitMQ, integrating one instance of Esper enterprise edition with Apache Kafka, and integrating two distributed instances of Esper enterprise edition with Apache Kafka. …”
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“…This software tool can be used with Windows, Linux and macOS operating systems. The open-source software package and its user manual are available at https://github.com/suraiya14/BaPreS. …”
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“…By providing Bioconductor objects, BiocMAP’s output can be integrated with powerful analytical open source software for analyzing methylation data. …”
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“…Prior work has not examined the validity of such calculations when EE is estimated via open-source techniques for research-grade accelerometry devices. …”
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“…We built it using both open source and proprietary solutions, to produce data driven interactive maps, charts and tables to help to understand the epidemiology of wild animal diseases, their spread and trend. …”
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“…Institutional 200 patients’ data were included for training and internal validation and 100 patients’ data from The Cancer Image Archive (TCIA) open-source image repository for external validation. …”
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“…To facilitate research in the field, we released the GPT-2 generative model and inference code with open-source license of community use in GitHub.…”
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“…Also, it prioritized disease-associated variants, genes, and regulatory networks linked to different phenotypes, providing novel insights into the interpretation of gene regulatory mechanisms. DeepGAMI is open-source and available for general use. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13073-023-01248-6.…”
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