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20401por Zou, Jianwen, Liu, Huaicheng, Chen, Jing, Zhang, Jin, Li, Xiaohan, Long, Yunfeng, Jiang, Yan, Li, Wenliang, Zhou, Bin“…In this study, four pairs of specific primers and the corresponding probes for PCV 2, -3, and -4, and porcine endogenous gene β-Actin as the positive internal reference index, were designed to establish a TaqMan multiplex real-time PCR (qPCR) assay for the simultaneous differential diagnosis of different types of viruses. …”
Publicado 2022
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20402por Brown, Phillip, Kucerova, Zuzana, Gorski, Lisa, Chen, Yi, Ivanova, Mirena, Leekitcharoenphon, Pimlapas, Parsons, Cameron, Niedermeyer, Jeffrey, Jackson, James, Kathariou, Sophia“…The multiplex PCR scheme developed by Doumith and collaborators employs primers targeting specific lineages (e.g., lineage II-specific lmo0737, lineage I-specific LMOf2365_2059) or serotypes (e.g., serotype 4b-specific LMOf2365_1900). …”
Publicado 2022
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20403por Jeon, Gyu-Tae, Kim, Hye-Ryung, Kim, Jong-Min, Baek, Ji-Su, Shin, Yeun-Kyung, Kwon, Oh-Kyu, Kang, Hae-Eun, Cho, Ho-Seong, Cheon, Doo-Sung, Park, Choi-Kyu“…Therefore, we developed a multiplex RT-qPCR (mRT-qPCR) using newly designed primers and probes targeting RdRp and N genes of all currently circulating SARS-CoV-2 variants as well as the canine or feline 16S rRNA gene as an endogenous internal positive control (EIPC) for reliable diagnosis of SARS-CoV-2 infection from suspected dogs and cats. …”
Publicado 2023
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20404por Cuénod, Aline, Agnetti, Jessica, Seth-Smith, Helena M. B., Roloff, Tim, Wälchli, Denise, Shcherbakov, Dimitri, Akbergenov, Rashid, Tschudin-Sutter, Sarah, Bassetti, Stefano, Siegemund, Martin, Nickel, Christian H., Moran-Gilad, Jacob, Keys, Timothy G., Pflüger, Valentin, Thomson, Nicholas R., Egli, Adrian“…Finally, we designed qPCR primers and probes to detect papGII-positive E. coli strains and prospectively screened E. coli from urine samples (n = 1657) at two healthcare centres. …”
Publicado 2023
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20405por Gafen, Hannah B., Liu, Chin-Chi, Ineck, Nikole E., Scully, Clare M., Mironovich, Melanie A., Taylor, Christopher M., Luo, Meng, Leis, Marina L., Scott, Erin M., Carter, Renee T., Hernke, David M., Paul, Narayan C., Lewin, Andrew C.“…Modeling of RT-PCR values reliably categorized the microbiome of IBK and Normal eyes; primers for Moraxella bovoculi, Moraxella bovis, and Staphylococcus spp. were consistently the most significant canonical variables in these models. …”
Publicado 2023
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20406“…METHODS: In this study, a type I pullulanase gene (pulN) was obtained from the strain P. polymyxa Nws-pp2 by degenerate primers. Through optimization of induced conditions, the recombinant PulN achieved functional soluble expression by low temperature induction. …”
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20407por Jamshed, Muhammad, Jia, Fei, Gong, Juwu, Palanga, Koffi Kibalou, Shi, Yuzhen, Li, Junwen, Shang, Haihong, Liu, Aiying, Chen, Tingting, Zhang, Zhen, Cai, Juan, Ge, Qun, Liu, Zhi, Lu, Quanwei, Deng, Xiaoying, Tan, Yunna, or Rashid, Harun, Sarfraz, Zareen, Hassan, Murtaza, Gong, Wankui, Yuan, Youlu“…A total of 851 polymorphic primers were finally selected and used to genotype 196 recombinant inbred lines (RIL) derived from a cross between 0 and 153 and sGK9708 and used to construct a linkage map. …”
Publicado 2016
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20408por Mir, Mohd Amin, Chaudhary, Saransh, Chaudhary, Manu, Pyasi, Anurag, Patil, N S, Girotra, Ruchi, Narang, Salil, Fatima, Nazish“…Bacterial DNA was extracted by the alkaline lysis method. β-Lactamase (BL) genes were amplified in single PCRs using a panel of primers for detection of most β-lactamase enzymes, including extended-spectrum β-lactamases (ESBLs) (bla(TEM), bla(SHV), bla(CTX-M)), metallo-β-lactamases (MBLs) (bla(VIM), bla(NDM), bla(IMP)), carbapenemases (bla(OXA), bla(KPC)) and class C cephalosporinases (bla(AmpC)). …”
Publicado 2018
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20409por Salinas, Ana María, Osorio, Verónica Gabriela, Pacha-Herrera, David, Vivanco, Juan S., Trueba, Ana Francisca, Machado, António“…The microbiological examination was done through Gram-stain, wet mount smears, and polymerase chain reaction (PCR) assays using primers for target genes, such as 16S rRNA (Atopobium vaginae, Mobiluncus mulieris, and Gardnerella species), ddl (Enterococcus faecalis), adk (Escherichia coli) and KER1 (Candida albicans) genes. …”
Publicado 2020
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20410por Fall, Abdou Khadre Dit Jadir, Dechavanne, Celia, Sabbagh, Audrey, Guitard, Evelyne, Milet, Jacqueline, Garcia, André, Dugoujon, Jean-Michel, Courtin, David, Migot-Nabias, Florence“…FcgRIIA 131R/H and FcgRIIIA 176F/V genotypes were determined using the TaqMan method and FcgRIIIB NA1/NA2 genotypes were assessed by polymerase chain reaction using allele-specific primers. Association analyses between the number of malaria infections during the follow-up and polymorphisms in IgG G3m allotypes and FcgR were studied independently by zero inflated binomial negative regression. …”
Publicado 2020
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20411por Du, Yuping, Liu, Xin, Zhang, Song, Chen, Shuo, Guan, Xue, Li, Qianhui, Chen, Xi, Zhao, Yang“…METHODS: We designed divergent and convergent primers, used sanger sequencing and RNase R digestion to verify the source of circCRIM1. …”
Publicado 2021
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20412“…The essential genes (Emt1, Mac1, Mac2, Mmf1) of the MEL BGC were detected with gene-specific primers. Emt1p, Mac1p and Mmf1p sequence analyses confirmed that the Trinidad strains harboured novel synonymous amino acid (aa) substitutions and structural comparisons revealed different regions of disorder, specifically for the Emt1p sequence. …”
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20413por Dantas, Priscila Pereira, Monteiro, Jussimara, Barbosa, Angélica Tapia Lima, Jatene, Ana Paula Lobo, Tierno, Paulo Fernando Guimarães Morando Marzocchi, de Medeiros, Eduardo Alexandrino Servolo, Beirão, Elisa Maria“…Pesquisas dos genes de resistência a ESβL e carbapenemases foram determinadas por PCR utilizando primers específicos. Resultados: 86 pacientes foram avaliados com culturas de vigilância. …”
Publicado 2022
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20414por Pan, Yangyang, Qiu, Shantong, Chen, Rui, Zhang, Tiantian, Liang, Linfeng, Wang, Meng, Baloch, Abdul Rasheed, Wang, Libin, Zhang, Qian, Yu, Sijiu“…The conserved regions of the PCV3 gene were analyzed with MEGA 7.1 software to design specific primers to sequence entire Cap genes in PCV3 strains, and the sequences were then used to confirm the subtypes of PCV3 in the positive samples. …”
Publicado 2022
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20415“…The xylanase (xynA)-encoding gene (650 bp) cloned from both the strains using specific primers showed 98 to 99% homology to β-1,4-endoxylanase gene. …”
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20416por Ma, Liang, Qin, Geng, Gai, Fei, Jiang, Yongwei, Huang, Zhan, Yang, Hui, Yao, Shukun, Du, Shiyu, Cao, Yongtong“…Stool DNA was extracted and bisulfite-converted, followed by qPCR assay, which contained two pairs of primers for the methylation detection of two fragments of the SDC2 gene (named SDC2-A and SDC2-B). …”
Publicado 2022
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20417por Talarico, Ernest F.“…METHODS: Reverse transcriptase PCR using PMCA4 isoform gene-specific primers that flanked alternative splice site A was used to examine the presence of PMCA4 mRNA in rbCE. …”
Publicado 2010
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20418por Byrne, Guerard W, Du, Zeji, Stalboerger, Paul, Kogelberg, Heide, McGregor, Christopher G A“…METHODS: The porcine B4GALNT2 cDNA was recovered from the original library isolate, subcloned, sequenced, and used to identify a bacterial artificial chromosome (BAC) containing the entire B4GALNT2 locus from the Children's Hospital Oakland Research Institute BACPAC Resource Centre (#AC173453). PCR primers were designed to map the intron/exon genomic organization in the BAC clone. …”
Publicado 2014
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20419por Murakami, Naoya, Kühnel, Annett, Schmid, Thomas E., Ilicic, Katarina, Stangl, Stefan, Braun, Isabella S., Gehrmann, Mathias, Molls, Michael, Itami, Jun, Multhoff, Gabriele“…Cytosolic and mHsp70 was quantified by Western blot analysis/ELISA and flow cytometry; double strand breaks (DSBs) and apoptosis were measured by flow cytometry using antibodies against γH2AX and real-time PCR (RT-PCR) using primers and antibodies directed against apoptosis related genes; and radiation sensitivity was determined using clonogenic cell surviving assays. …”
Publicado 2015
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20420por Lamos, Cristina, Mihaljevic, Charlotte, Aulmann, Sebastian, Bruckner, Thomas, Domschke, Christoph, Wallwiener, Markus, Paringer, Carmen, Fluhr, Herbert, Schott, Sarah, Dinkic, Christine, Brucker, Janina, Golatta, Michael, Gensthaler, Lisa, Eichbaum, Michael, Sohn, Christof, Rom, Joachim“…Eighteen pairs of type-specific nested PCR primers were assessed to detect the following "high-risk" HPV genotypes: 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and 68, as well as the "low-risk" genotypes 6/11, 42, 43 and 44. …”
Publicado 2016
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