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18281“…In this work, P. aeruginosa isolates were collected from different clinical sources, and the three CRISPR/Cas subtypes (I-C, I-E, & I-F1) were detected via singleplex and multiplex PCR techniques using novel universal primers that were designed specifically in this study. …”
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18282por Lira, Sanny Marcele da Costa, Levi, Jose Eduardo, Bub, Carolina Bonet, Aravecchia, Maria Giselda, Altman, Silvia Nunez, Sakashita, Araci Massami, Kutner, Jose Mauro“…After extraction, the NAT set-up is performed in the robotic pipettor, in which an amplification mixture containing primers and probes for ZIKV and Polio vaccine virus (PV) are added in duplex as an internal control. …”
Publicado 2022
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18283por Djokic, Milica, Radic, Tanja, Santric, Veljko, Dragicevic, Dejan, Suvakov, Sonja, Mihailovic, Smiljana, Stankovic, Vesna, Cekerevac, Milica, Simic, Tatjana, Nikitovic, Marina, Coric, Vesna“…Gene polymorphisms were determined by quantitative polymerase chain reaction (qPCR) and polymerase chain reaction with confronting two-pair primers (PCR-CTTP) methods. Multiple risk models were composed to inspect the separate and mutual effect of multiple genes and in combination with acquired contributory factors on the risk of PC development. …”
Publicado 2022
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18284por Piboon, Promporn, Poommouang, Anocha, Buddhachat, Kittisak, Kaewmong, Patcharaporn, Kittiwattanawong, Kongkiat, Nganvongpanit, Korakot“…A total of 17 and 16 ISSR primers that produced clear and polymorphic bands were selected for T. aduncus and S. attenuata, respectively. …”
Publicado 2022
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18285por Day, Jessica, Afshar, Baharak, Rowlands, Richard S, Umer, Taiba S, Windsor, Helena, Paukner, Susanne, Jensen, Jorgen S, Spiller, Owen B, Chalker, Victoria J, Beeton, Michael L“…Based on the consensus sequences from the genomic data, PCR primers were designed, and tested, for the amplification of the QRDR within the parC gene. …”
Publicado 2022
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18286por Aono, Daisuke, Demura, Masashi, Karashima, Shigehiro, Kometani, Mitsuhiro, Konishi, Seigo, Sawamura, Takashi, Takeda, Yoshimichi, Takeda, Yoshiyu, Yoneda, Takashi“…Isolated DNA was treated with bisulfite and amplified using primers specific for the humanHSD11B1promoter region. …”
Publicado 2022
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18287“…Here, a novel molecular diagnostic assay termed loop-mediated isothermal amplification combined with nanoparticles-based lateral flow biosensor (LAMP-LFB) was developed for C. albicans rapid detection. A set of six primers was designed based on the C. albicans species-specific internal transcribed spacer 2 (ITS2) gene. …”
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18288por Lizarazo-Zuluaga, Andrea P., Carvajal-Gamez, Bertha I., Wilkowsky, Silvina, Cravero, Silvio, Trangoni, Marcos, Mosqueda, Juan“…The aim of this work was to develop and standardize the LAMP technique for B. bigemina detection and its visualization using hydroxynaphtol blue. For this situation, primers were designed from the conserved sequences of the B. bigemina ama-1 gene. …”
Publicado 2022
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18289por Shafique, Shazia, Javed, Alina, Shafique, Sobiya, Hussain, Abrar, Rafique, Rubab, Mubarak, Ayesha“…The identification was executed morphologically as well as genetically by nucleotide sequencing of rDNA using Internal spacer region (ITS) and Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) primers. Morphological characters demonstrated a rapidly growing colony on MEA reaching 5.0–5.5 cm in diameter without zonation. …”
Publicado 2022
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18290“…A knockdown resistance (kdr) (L1014F) and Acetylcholinesterase (Ace-1) (G119S) mutations have been detected by using allele-specific primers and a polymerase chain reaction (PCR) amplification of specific alleles (PASA) diagnostic test was performed for detection of F290V mutation. …”
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18291por Basanagouda, Gonal, Ramesh, Sampangi, Siddu, Chindi Basavaraj, Chandana, Basalapura Rangegowda, Kalpana, Mugali Pundalik, Rotti, Kirankumar, Sathish, Hosakoti“…Taking cues from highly conserved domains in proteins coded by BADH genes, we isolated dolichos bean homolog (LpBADH2) of soybean GmBADH2 gene using reported degenerate primers designed to conserved domains. Analysis of the translated amino acid sequence of LpBADH2 showed high degree of similarity (97.30%) with those of soybean homolog (GmBADH2). …”
Publicado 2023
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18292“…This circumvents the trouble of pretreatment experiments in traditional methods, including complex enzymatic mixtures, specialized experimental equipment, many primers optimization as well as reverse transcriptase. …”
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18293Genetic variation of Cerastium alpinum L. from Babia Góra, a critically endangered species in Polandpor Milarska, Sylwia Eryka, Androsiuk, Piotr, Bednarek, Piotr Tomasz, Larson, Keith, Giełwanowska, Irena“…Genetic analysis of all C. alpinum samples using eight PBS primers identified 262 bands, 79.4% of which were polymorphic. iPBS markers revealed low genetic diversity (average H(e) = 0.085) and high population differentiation (F(ST) = 0.617). …”
Publicado 2022
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18294por Kero, Katja, Hieta, Niina, Kallonen, Teemu, Ahtikoski, Anne, Laine, Hanna K., Rautava, Jaana, Munukka, Eveliina“…Variable region 4 of bacterial 16S rRNA gene was amplified with single PCR by custom-designed dual-indexed primers and sequenced with Illumina MiSeq system. …”
Publicado 2023
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18295por Kandathil, Abraham J., Benner, Sarah E., Bloch, Evan M., Shrestha, Ruchee, Ajayi, Olivia, Zhu, Xianming, Caturegli, Patrizio P., Shoham, Shmuel, Sullivan, David, Gebo, Kelly, Quinn, Thomas C., Casadevall, Arturo, Hanley, Daniel, Pekosz, Andrew, Redd, Andrew D., Balagopal, Ashwin, Tobian, Aaron A. R.“…METHODS: The DNA virome was characterized in potential CCP donors (n = 30) using viral genome specific PCR primers to identify DNA plasma virome members of the Herpesviridae [Epstein Barr Virus (EBV), cytomegalovirus (CMV), human herpesvirus 6A/B, human herpesvirus 7] and Anelloviridae [Torque teno viruses (TTV), Torque teno mini viruses (TTMV), and Torque teno midi viruses (TTMDV)] families. …”
Publicado 2022
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18296por Abdulqadir, Mardin Othman, Rashid, Peshnyar Muhammad Atta, Hussain, Ali Hattem, Rahman, Heshu Sulaiman, Ezzaddin, Shahow Abdulrehman“…METHODS: Genotyping was carried out utilizing Polymerase Chain Reaction (PCR) type-specified primers. Thirty-three chronic HBV patients were included in the HBV genotyping assay. …”
Publicado 2023
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18297por Abuaku, Benjamin, Boateng, Paul, Peprah, Nana Yaw, Asamoah, Alexander, Duah-Quashie, Nancy Odurowah, Matrevi, Sena Adzoa, Amoako, Eunice Obeng, Quashie, Neils, Owusu-Antwi, Felicia, Malm, Keziah Laurencia, Koram, Kwadwo Ansah“…PCR genotyping distinguished between recrudescence and re-infection using merozoite surface protein 2 (MSP2)-specific primers for FC27 and 3D7 strains. Per protocol analyses showed day 28 efficacy of 100% in all three sentinel sites with day 42 PCR-corrected efficacy ranging between 90.3% (95% CI: 80.1 – 96.4%) in the savannah zone and 100% in the forest and coastal zones, yielding a national average of 97.0% (95% CI: 93.4 – 98.8). …”
Publicado 2023
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18298Molecular evaluation of Cryptosporidium spp. among breeding calves of Lorestan province Western Iranpor Talebi, Razieh, Javadi Mamaghani, Amirreza, Kheirandish, Farnaz, Karimi, Azadeh, Ebrahimzadeh, Farzad, Kazempour, Mohamad, Zebardast, Nozhat, Fallahi, Shirzad“…To detect Cryptosporidium species, specific primers targeting the SAM‐1 gene of Cryptosporidium and a commercial master mix were used for PCR. …”
Publicado 2022
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18299por Mena, Juan, Hidalgo, Christian, Estay-Olea, Daniela, Sallaberry-Pincheira, Nicole, Bacigalupo, Antonella, Rubio, André V., Peñaloza, Diego, Sánchez, Carolina, Gómez-Adaros, Javiera, Olmos, Valeria, Cabello, Javier, Ivelic, Kendra, Abarca, María José, Ramírez-Álvarez, Diego, Torregrosa Rocabado, Marisol, Durán Castro, Natalia, Carreño, Martina, Gómez, Gabriela, Cattan, Pedro E., Ramírez-Toloza, Galia, Robbiano, Sofía, Marchese, Carla, Raffo, Eduardo, Stowhas, Paulina, Medina-Vogel, Gonzalo, Landaeta-Aqueveque, Carlos, Ortega, René, Waleckx, Etienne, Gónzalez-Acuña, Daniel, Rojo, Gemma“…RNA was extracted from the samples and two different molecular assays were performed: first, a conventional RT-PCR with pan-coronavirus primers and a second SARS-CoV-2 qPCR targeting the N and S genes. …”
Publicado 2023
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18300por Mo, Xiao-Mei, Pan, Qing, Seifert, Harald, Xing, Xi-Wen, Yuan, Jing, Zhou, Zi-Yuan, Luo, Xing-Yu, Liu, Hou-Ming, Xie, Yong-Li, Yang, Liu-Qing, Hong, Xiao-Bing, Higgins, Paul G., Wong, Nai-Kei“…Herein, definitive identification by PCR was performed with universal and species-specific primers targeting 16S rDNA and rpoB genes, respectively, followed by Sanger sequencing and blast analysis. …”
Publicado 2022
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