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18361por Herrero, Salvador, Gechev, Tsanko, Bakker, Petra L, Moar, William J, de Maagd, Ruud A“…Using sequences obtained from the three APN cDNA fragments and degenerate primers for a fourth APN (APN3), the full length sequences of four S. exigua APN cDNAs were obtained. …”
Publicado 2005
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18362por Ryan, Aideen E, Lane, Sinead, Shanahan, Fergus, O'Connell, Joe, Houston, Aileen M“…FasL expression was detected at the mRNA level by RT-PCR, using intron spanning primers, and at the protein level by Western Blotting and immunofluorescence, using a polyclonal FasL- specific antibody. …”
Publicado 2006
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18363por Yenugu, Suresh, Chintalgattu, Vishnu, Wingard, Christopher J, Radhakrishnan, Yashwanth, French, Frank S, Hall, Susan H“…RNAs isolated from male reproductive tract tissues of rat were reverse transcribed and PCR amplified using gene specific primers for defensins. PCR products were sequenced to confirm their identity. …”
Publicado 2006
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18364“…Based on a multiple allele alignment, locus-specific primers are designed in conserved regions, minimizing 'null' alleles. …”
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18365por Alsmadi, Osama A, Bornarth, Carole J, Song, Wanmin, Wisniewski, Michele, Du, Jing, Brockman, Joel P, Faruqi, A Fawad, Hosono, Seiyu, Sun, Zhenyu, Du, Yuefen, Wu, Xiaohong, Egholm, Michael, Abarzúa, Patricio, Lasken, Roger S, Driscoll, Mark D“…In each assay, the probes for both normal and mutant alleles were combined in a single reaction. Multiple ERCA primers combined with a quenched-peptide nucleic acid (Q-PNA) fluorescent detection system greatly accellerated the appearance of signal. …”
Publicado 2003
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18366por Moyo, Sabrina J, Maselle, Samwel Y, Matee, Mecky I, Langeland, Nina, Mylvaganam, Haima“…CONCLUSION: The results show a high proportion of DEC among Tanzanian children with diarrhea, with typical EAEC and typical EPEC predominating. The use of primers for both variants of ST1 (st1a and st1b) increased the sensitivity for detection of ETEC strains.…”
Publicado 2007
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18367por Krypuy, Michael, Ahmed, Ahmed Ashour, Etemadmoghadam, Dariush, Hyland, Sarah J, deFazio, Anna, Fox, Stephen B, Brenton, James D, Bowtell, David D, Dobrovic, Alexander“…Sequence changes were also introduced into some of the primers to improve the melting characteristics of the amplicon. …”
Publicado 2007
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18368“…A panel of 18 V alpha- and 21 V beta-specific primers was used to detect the TCR gene use from cDNA. …”
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18369“…Thereafter, 95 colorectal cancer patients and a control group including healthy subjects (n=11), patients with other gastrointestinal neoplasms (n=11) or inflammatory bowel disease (n=9) were analysed. Specific cDNA primers for CEA transcripts were used to apply RT-PCR to peripheral blood samples. …”
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18370por van Doorn, Ronald, Szemes, Marianna, Bonants, Peter, Kowalchuk, George A, Salles, Joana F, Ortenberg, Elen, Schoen, Cor D“…Upon perfect target hybridization, the PRI-lock probes are circularized via enzymatic ligation, subsequently serving as template for individual, standardized amplification via unique probe-specific primers. Adaptation to OpenArrays™, which can accommodate up to 3072 33 nl PCR amplifications, allowed high-throughput real-time quantification. …”
Publicado 2007
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18371por Bodor, Agnes, Elxnat, Bettina, Thiel, Verena, Schulz, Stefan, Wagner-Döbler, Irene“…Here, we surveyed its occurrence in a collection of 165 marine isolates belonging to abundant marine phyla using conserved degenerated PCR primers and sequencing of selected positive bands to determine if the presence of the luxS gene is phylogenetically conserved or dependent on the habitat. …”
Publicado 2008
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18372por Jin, Da-Zhi, Xu, Xiao-Jing, Chen, Su-Hong, Wen, Si-Yuan, Ma, Xue-En, Zhang, Zheng, Lin, Feng, Wang, Sheng-Qi“…The oligonucleotide microarray was composed of eight probes including negative control and positive control from 16S rDNA gene. The six primers were designed to amplify target fragments in two triplex PCR, and then hybridized with oligonucleotide microarray. …”
Publicado 2007
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18373por Langezaal, S M, Graadt van Roggen, J F, Cleton-Jansen, A M, Baelde, J J, Hogendoorn, P C W“…Using RT-PCR and FISH, a series of metastases from 25 known cutaneous melanomas and 8 melanoma cell lines (5 uveal and 3 cutaneous) were screened for the t(12;22)(q13;q13) translocation. Primers for RT-PCR were chosen based upon published breakpoint sequences. …”
Publicado 2001
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18374por Kim, H, Scorilas, A, Katsaros, D, Yousef, G M, Massobrio, M, Fracchioli, S, Piccinno, R, Gordini, G, Diamandis, E P“…KLK5 was amplified by PCR using gene specific primers, and the identity of the PCR product was verified by sequencing. …”
Publicado 2001
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18375“…Hence, in the current study, we investigated p53 exon 4 codon 72 polymorphism using Proline or Arginine specific primers from the peripheral blood cells (PBC) representing constitutional DNA from 72 oral cancer patients. …”
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18376“…The sequence was rapidly determined using a previously described approach that utilized a PCR-based method and employed universal primers, designed on the scaffold of multiple sequence alignment of chloroplast genomes. …”
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18377“…METHODS: P. falciparum field samples from 161 volunteers were genotyped by nested PCR using polymorphic MSP2 family-specific primers. Data were analysed to determine variability of band size measurements between identical MSP2 alleles randomized into different agarose lanes. …”
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18378por Magistrado, Pamela A, Staalsoe, Trine, Theander, Thor G, Hviid, Lars, Jensen, Anja TR“…The serological phenotype of the 3D7(SM )parasites was determined by flow cytometry using malaria semi-immune and immune plasma and transcription of the 59 var genes in 3D7 were analysed by real-time quantitative reverse transcriptase-polymerase chain reaction (RT-PCR) using var-specific primers. RESULTS: A selection-induced increased adhesion of 3D7(SM )iRBC to CD36 resulted in a reduced var4 transcription and VAR4 surface expression. …”
Publicado 2008
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18379“…CONCLUSION: Simulation revealed that sequential digestion of immobilized cDNA followed by the partitioning of released fragments into mutually exclusive pools outperformed other cDNA-AFLP protocols in terms of coverage, redundancy, fragment length, and the total number of PCRs. Primers generating 30 to 70 amplicons per PCR provided the highest fraction of electrophoretically distinguishable fragments suitable for normalization. …”
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18380por Hong, Yang, Liu, Tongrui, Lee, Margie D, Hofacre, Charles L, Maier, Marie, White, David G, Ayers, Sherry, Wang, Lihua, Berghaus, Roy, Maurer, John J“…RESULTS: By analyzing the nucleotide sequences of the genes for O-antigen biosynthesis including wba operon and the central variable regions of the H1 and H2 flagellin genes in Salmonella, designated PCR primers for four multiplex PCR reactions were used to detect and differentiate Salmonella serogroups A/D1, B, C1, C2, or E1; H1 antigen types i, g, m, r or z(10); and H2 antigen complexes, I: 1,2; 1,5; 1,6; 1,7 or II: e,n,x; e,n,z(15). …”
Publicado 2008
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