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18761“…Twelve (12) RAPD and nine (9) ISSR primers developed a total of 104 and 91 scorable bands, respectively. …”
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18762por Azimi, Leila, Armin, Shahnaz, Samadi Kafil, Hossein, Abdollahi, Nafiseh, Ghazvini, Kiarash, Hasanzadeh, Sepide, Shahraki Zahedani, Shahram, Rafiei Tabatabaei, Sedigheh, Fallah, Fatemeh“…The frequency of genes encoding aminoglycoside-modifying enzymes (AMEs) was screened by the PCR method via specific primers. Among all pediatric and general hospitals, the predominant GNB isolates were Acinetobacter spp. …”
Publicado 2022
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18763“…To further simplify the protocol, asymmetric homology arms were produced by PCR in a single step with two primers and then purified using a desalting column. …”
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18764por Tabassum, Nazia, Lee, Ji-Hyun, Lee, Soo-Rin, Kim, Jong-U, Park, Hyun, Kim, Hyun-Woo, Kim, Jeong-Hoon“…Using metabarcoding analysis with dual universal primers (18Sv9 and miniFish), the overall diet composition and detailed information about piscine prey were clearly elucidated. …”
Publicado 2022
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18765“…With the CAPS marker, specific detection of Xfm isolates was possible from pure cultures, inoculated greenhouse-grown plant samples, and field infected blueberry samples by restriction digestion of the rpoD gene PCR product (amplified with primers RST31 and RST33) using the BtsI enzyme. The LAMP assay allowed for specific real-time amplification of a 204-bp portion of the Xfm rpoD gene from both pure bacterial cultures and infected plant material using the Genie(®) III system, a result further affirmed by gel electrophoresis and SYBR™ Green I DNA staining for visual observation. …”
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18766por Patil, Sandip, Liu, Xiaorong, Chen, Hongyu, Francisco, Ngiambudulu M, Wen, Feiqiu, Chen, Yixin“…Drug resistance genes were identified using targeted primers and Sanger sequencing. The transferability and genome location of mcr-1 was determined by performing conjugation, S1-PFGE and Southern blot hybridization analysis. …”
Publicado 2022
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18767por Van Poelvoorde, Laura A. E., Gand, Mathieu, Fraiture, Marie-Alice, De Keersmaecker, Sigrid C. J., Verhaegen, Bavo, Van Hoorde, Koenraad, Cay, Ann Brigitte, Balmelle, Nadège, Herman, Philippe, Roosens, Nancy“…First, we used all information offered by available whole-genome sequencing data for SARS-CoV-2 for the selection of the two PCR assays targeting two different regions in the genome, and to monitor the possible impact of virus evolution on the specificity of the primers and probes of the PCR assays during and after the development of the assays. …”
Publicado 2021
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18768por Cicculli, Vincent, Ayhan, Nazli, Luciani, Léa, Pezzi, Laura, Maitre, Apolline, Decarreaux, Dorine, de Lamballerie, Xavier, Paoli, Jean‐Christophe, Vial, Laurence, Charrel, Remi, Falchi, Alessandra“…METHODS: Ticks were tested using specific primers targeting conserved regions of sequences corresponding to two genera: parapoxvirus and orthopoxvirus. …”
Publicado 2022
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18769por Kooyman, F. N. J., Zweerus, H., Nijsse, E. R., Jongejan, F., Wagenaar, J. A., Broens, E. M.“…Ticks were identified based on morphology, and DNA was extracted and amplified by a panel of tick-borne pathogen-specific primers. Next, the amplicons were subjected to reverse line blot with specific probes for important pathogens to determine their presence or absence. …”
Publicado 2022
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18770por Shanmugam, Chandrakumar, Behring, Michael, Luthra, Vishwas, Leal, Sixto M, Varambally, Sooryanarayana, Netto, George J, Manne, Upender“…RESULTS: The RT-PCR tests exhibited heterogeneity in the primers and reagents used. Of 1957 positive RT-PCR COVID-19 participants, 1585 had positive serum antibody (IgM±IgG) tests (sensitivity 0.81, 95% CI 0.66 to 0.90). …”
Publicado 2022
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18771por Olivero, Antonella, Rosso, Chiara, Ciancio, Alessia, Abate, Maria Lorena, Nicolosi, Aurora, Troshina, Giulia, Armandi, Angelo, Ribaldone, Davide Giuseppe, Saracco, Giorgio Maria, Bugianesi, Elisabetta, Rizzetto, Mario, Caviglia, Gian Paolo“…Our aim was to develop a ddPCR assay for Hepatitis Delta virus (HDV)-RNA viremia quantification and then evaluate its performance in relation to real-time PCR methods. Primers and probe were designed from conserved regions of HDV genome to detect all the 8 HDV genotypes; the World Health Organization (WHO)-HDV international standard was used to calculate the conversion factor transforming results from copies/mL to IU/mL. …”
Publicado 2022
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18772Investigation of many bacterial and viral infections circulating in pigeons showing nervous symptomspor Badr, Heba, AbdelMenamm Shosha, Eman, Roshdy, Heba, Abd El-Halem Mohammed, Ahmed, saad, Noha, Mostafa Aboelenin, Salama, Mohamed Soliman, Mohamed, El-Tahan, Amira M., El-Saadony, Mohamed T., Yehia, Nahed“…For viral identification, RT-PCR specific oligonucleotide primers were used for distinguishing of Avian influenza virus, PPMV-1 and PPMV-3. …”
Publicado 2022
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18773por Ma, Hongying, Zhang, Han, Deng, Jie, Zhao, Hu, Kong, Fei, Jiang, Wei, Zhang, Hongxing, Dong, Xianggui, Wang, Qijun“…We have designed a specific set of primers for the genus Batrachuperus to amplify a 160 bp fragment of Cytb. …”
Publicado 2022
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18774“…RESULTS: The results showed that 12 (16%) samples were positive for OPA, based on env gene-specific primers. Nucleotide sequences of partial 545 bp of the env gene showed (0.07–0.12) variations from global strains presented in the NCBI database. …”
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18775por Radvánszka, Monika, Paul, Evan D., Hajdu, Roman, Boršová, Kristína, Kováčová, Viera, Putaj, Piotr, Bírová, Stanislava, Čirková, Ivana, Čarnecký, Martin, Buranovská, Katarína, Szobi, Adrián, Vojtaššáková, Nina, Drobná, Diana, Čabanová, Viktória, Sláviková, Monika, Ličková, Martina, Vaňová, Veronika, Fumačová Havlíková, Sabína, Lukáčiková, Ľubomíra, Kajanová, Ivana, Koči, Juraj, Rusňáková, Diana, Sedláčková, Tatiana, Max, Klaas E. A., Tuschl, Thomas, Szemes, Tomáš, Klempa, Boris, Čekan, Pavol“…Here, we describe a series of SARS‐CoV‐2 RT‐qPCR tests that are originally based on the protocol targeting regions of the RNA‐dependent RNA polymerase (RdRp) and envelope (E) coding genes developed by the Charité Berlin. We redesigned the primers/probes, utilized locked nucleic acid nucleotides, incorporated dual probe technology and conducted extensive optimizations of reaction conditions to enhance the sensitivity and specificity of these tests. …”
Publicado 2022
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18776por Omooja, Jonah, Bbosa, Nicholas, Lule, Dan Bugembe, Nannyonjo, Maria, Lunkuse, Sandra, Nassolo, Faridah, Nabirye, Stella Esther, Suubi, Hamidah Namagembe, Kaleebu, Pontiano, Ssemwanga, Deogratius“…We recommend improvement in DBS handling, pre-genotyping viral load testing to screen samples to enhance genotyping success and the development of more sensitive assays with well-designed primers to genotype specimens with low or undetectable viral load, especially in this era where virological suppression rates are rising due to increased antiretroviral therapy roll-out.…”
Publicado 2022
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18777por Abd El-Jawad, Amira Mohamed, Ibrahim, Iman Hassan, Zaki, Moushira Erfan, Elias, Tahany Ramzy, Rasheed, Wafaa Ibrahim, Amr, Khalda Said“…As the MetS develops, an alteration in the expression of some genes regulated by circulating microRNAs may also develop as a consequence. TaqMan microRNA primers specific for both miR-27a and miR-320a were used to estimate their expression levels in plasma samples collected from two groups: obese females with metabolic syndrome (n = 49) and lean healthy female volunteers (n = 23), to detect if their expression levels were deregulated with MetS. …”
Publicado 2022
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18778por Akbarian, Fahimeh, Tavalaee, Marziyeh, Dattilio, Maurizio, Nasr-Esfahani, Mohammad Hossein“…RNA was extracted from sperm samples followed by cDNA synthesis and real-time polymerase chain reaction (PCR) using CBS, CSE, and GAPDH primers. RESULTS: Sperm concentration and motility in infertile and varicocele groups were significantly lower (P=0.001), while spermatoza normal morphology was higher than fertile group (P=0.05). …”
Publicado 2022
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18779“…The 5′-UTR and VP1 genes were interpreted using RT-nPCR with degenerate primers to confirm their genotypes. Following that, the entire genome sequences of each viral type were recovered, allowing for the interpretation of several molecular properties. …”
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18780por Siahpoush, Mohammad, Noorbazargan, Hassan, Kalantari, Shirin, Shayestehpour, Mohammad, Yazdani, Shaghayegh“…Then, nested polymerase chain reaction (Nested PCR) was performed for TTV using specific primers. RESULTS: Among 50 cervical specimens without HPV, 14 were TTV positive (28%); among 50 low-risk HPV cervical specimen, 23 were TTV positive (46%), and from 50 high-risk HPV cervical specimen, 48 were TTV positive (96%). …”
Publicado 2022
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