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19041por Anisimova, Veronika E, Rebrikov, Denis V, Shagin, Dmitry A, Kozhemyako, Valery B, Menzorova, Natalia I, Staroverov, Dmitry B, Ziganshin, Rustam, Vagner, Laura L, Rasskazov, Valery A, Lukyanov, Sergey A, Shcheglov, Alex S“…RESULTS: Using degenerative primers and the rapid amplification of cDNA ends (RACE) procedure, we cloned the Duplex-Specific Nuclease (DSN) gene from the hepatopancreas of the Kamchatka crab and determined its full primary structure. …”
Publicado 2008
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19042“…METHODS: Methylation-specific primers were designed based on the methylation profiles of the TGFBI promoter in human tumor cell lines, and MSP conditions were optimized for accurate and efficient amplification. …”
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19043por Expósito-Rodríguez, Marino, Borges, Andrés A, Borges-Pérez, Andrés, Pérez, José A“…First, we designed, tested and optimized amplification primers for real-time RT-PCR. Then, expression data from each candidate gene were evaluated with three complementary approaches based on different statistical procedures. …”
Publicado 2008
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19044por de Souza, Danival J, Bézier, Annie, Depoix, Delphine, Drezen, Jean-Michel, Lenoir, Alain“…Efficiency of the treatment was estimated by quantitative polymerase chain reaction and Fluorescent in situ hybridization (FISH), using Blochmannia specific primers (qPCR) and two fluorescent probes (one for all Eubacterial and other specific for Blochmannia). …”
Publicado 2009
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19045Gene Composer: database software for protein construct design, codon engineering, and gene synthesispor Lorimer, Don, Raymond, Amy, Walchli, John, Mixon, Mark, Barrow, Adrienne, Wallace, Ellen, Grice, Rena, Burgin, Alex, Stewart, Lance“…The gene-to-oligo algorithm of the Gene Design Module plans out all of the required overlapping oligonucleotides and mutagenic primers needed to synthesize the desired gene constructs by PCR, and for physically cloning them into selected vectors by the most popular subcloning strategies. …”
Publicado 2009
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19046por Naka, Shuhei, Yamana, Aki, Nakano, Kazuhiko, Okawa, Rena, Fujita, Kazuyo, Kojima, Ayuchi, Nemoto, Hirotoshi, Nomura, Ryota, Matsumoto, Michiyo, Ooshima, Takashi“…Bacterial DNA was extracted from the specimens and PCR analyses were carried out to detect 10 selected periodontopathic species using specific primers for each. In addition, statistical analyses were performed to analyze the correlations among clinical parameters and the detected species. …”
Publicado 2009
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19047por Finkbeiner, Stacy R, Holtz, Lori R, Jiang, Yanfang, Rajendran, Priya, Franz, Carl J, Zhao, Guoyan, Kang, Gagandeep, Wang, David“…In this study, we used consensus astrovirus primers targeting the RNA polymerase to define the diversity of astroviruses present in pediatric patients with diarrhea on two continents. …”
Publicado 2009
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19048“…Real-time PCR (RT-PCR) has become the standard method to detect and quantify virus infections, including enteroviruses, in clinical samples. For instance, primers directed to the highly conserved 5' untranslated region (5'UTR) of the enterovirus genome enable detection of a wide spectrum of enteroviruses. …”
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19049por Sokolowska, Milena, Wodz-Naskiewicz, Karolina, Cieslak, Malgorzata, Seta, Karolina, Bednarek, Andrzej K, Pawliczak, Rafal“…Real-time PCR was performed with specific primers for transcript I [GenBank:DQ131799] and II [GenBank:DQ131800]. …”
Publicado 2009
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19050“…BACKGROUND: DNA signatures are distinct short nucleotide sequences that provide valuable information that is used for various purposes, such as the design of Polymerase Chain Reaction primers and microarray experiments. Biologists usually use a discovery algorithm to find unique signatures from DNA databases, and then apply the signatures to microarray experiments. …”
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19051por Hejazi, Mohammad A, Barzegari, Abolfazl, Gharajeh, Nahid Hosseinzadeh, Hejazi, Mohammad S“…PCR amplification with genus-specific primers resulted in production of a ~2170 bp DNA band, which is similar to that of D. salina 18S rDNA gene containing only one intron near 5' terminus. …”
Publicado 2010
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19052por Lee, Vernon J, Yap, Jonathan, Tay, Joshua K, Barr, Ian, Gao, Qiuhan, Ho, Hanley J, Tan, Boon Huan, Kelly, Paul M, Tambyah, Paul A, Kelso, Anne, Chen, Mark I“…The entire cohort was screened by RT-PCR (with HA gene primers) using nasopharyngeal swabs three times a week. …”
Publicado 2010
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19053por Ben Mansour, Khansa, Burucoa, Christophe, Zribi, Meriem, Masmoudi, Afef, Karoui, Sami, Kallel, Lamia, Chouaib, Soufiène, Matri, Samira, Fekih, Monia, Zarrouk, Sonia, Labbene, Mounir, Boubaker, Jalel, Cheikh, Imed, Hriz, Mongi Ben, Siala, Nadia, Ayadi, Abdelkarim, Filali, Azza, Mami, Nabil Ben, Najjar, Taoufik, Maherzi, Ahmed, Sfar, Mohamed Tahar, Fendri, Chedlia“…The real-time PCR using Scorpion primers was performed in all cases to assess clarithromycin primary resistance and point mutations involved. …”
Publicado 2010
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19054por Abdelwhab, El-Sayed M, Erfan, Ahmed M, Grund, Christian, Ziller, Mario, Arafa, Abdel-Satar, Beer, Martin, Aly, Mona M, Hafez, Hafez M, Harder, Timm C“…Viruses of the 2.2.1v lineage represent drift variants escaping from conventional vaccine-induced immunity and some of these strains also escaped detection by commercial real time reverse transcriptase PCR (RT-qPCR) protocols due to mismatches in the primers/probe binding sites. RESULTS: We developed therefore a versatile, sensitive and lineage-specific multiplex RT-qPCR for detection and typing of H5N1 viruses in Egypt. …”
Publicado 2010
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19055por Ma, Liang, Jensen, Jørgen S., Mancuso, Miriam, Hamasuna, Ryoichi, Jia, Qiuyao, McGowin, Chris L., Martin, David H.“…When applying our sequence data to evaluate published MgPa operon-based diagnostic PCR assays and genotyping systems, we found that 11 of 19 primers contain up to 19 variable nucleotides and that the target for one of two typing systems is located in a hypervariable repeat region, suggesting the likelihood of false results with some of these assays. …”
Publicado 2010
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19056por Wernery, Ulrich, Liu, Chunhai, Baskar, Vijay, Guerineche, Zhor, Khazanehdari, Kamal A., Saleem, Shazia, Kinne, Jörg, Wernery, Renate, Griffin, Darren K., Chang, Il-Kuk“…The incorporation and differentiation of Houbara gPGCs in chimeric chicken testis were assessed by PCR with Houbara-specific primers and 31.3% (5/16) gonads collected from the injected chicken embryos showed the presence of donor Houbara cells. …”
Publicado 2010
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19057por Fridjonsson, Olafur, Olafsson, Kristinn, Tompsett, Scott, Bjornsdottir, Snaedis, Consuegra, Sonia, Knox, David, de Leaniz, Carlos Garcia, Magnusdottir, Steinunn, Olafsdottir, Gudbjorg, Verspoor, Eric, Hjorleifsdottir, Sigridur“…A unique combination of barcoded primers and a partitioned sequencing plate was employed to designate each sequence read to its original sample. …”
Publicado 2011
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19058por Diaz-Badillo, Alvaro, Bolling, Bethany G, Perez-Ramirez, Gerardo, Moore, Chester G, Martinez-Munoz, Jorge P, Padilla-Viveros, America A, Camacho-Nuez, Minerva, Diaz-Perez, Alfonso, Beaty, Barry J, de Lourdes Munoz, Maria“…Members of the Culex pipiens complex were separated by measuring the ratio of the dorsal and ventral arms (DV/D ratio) of the male genitalia and also by using diagnostic primers designed for the Ace.2 gene. Culex pipiens quinquefasciatus was the most abundant form collected. …”
Publicado 2011
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19059“…Total RNA was extracted and reverse transcribed before amplification in a TaqMan qPCR reaction using primers and probes specific for MIG (CXCL9), IP-10 (CXCL10) and HPRT. …”
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19060por Sobolewski, Ireneusz, Polska, Katarzyna, Żylicz-Stachula, Agnieszka, Jeżewska-Frąckowiak, Joanna, Rak, Janusz, Skowron, Piotr“…These sites are introduced using synthetic DNA primers or are naturally present in the sequence used. …”
Publicado 2011
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