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19541“…The aim of this work was to develop a panel of markers for these genes, which could be used for a rapid and eff icient genotyping of domestic soybean cultivars and selection of plant material based on sensitivity to photoperiod and the duration of vegetation. Combinations of 10 primers, both previously developed and our own, were tested to identify different alleles of the E1–E4, GmFT2a, and GmFT5a genes using 10 soybean cultivars from different maturity groups. …”
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19542por Gupta, Renu, Kumari, Anshu, Sharma, Shiwali, Alzahrani, Othman M., Noureldeen, Ahmed, Darwish, Hadeer“…Four distinct isolates were amplified, cloned and sequenced for taxonomic identification using 16S primers. The results indicated that PS 1, PS 2, PS 3, PS 4 were related to Pseudomonas aeruginosa, Bacillus subtilis strain 1, B. subtilis strain 2, B. subtilis strain 3, respectively. …”
Publicado 2022
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19543por Geng, Xiaoge, Wang, Jingya, Zhang, Chenjing, Zhou, Xiaolu, Jing, Jiyong, Pan, Wensheng“…The purpose of this study was to investigate the role of circular RNA COL6A3_030 (circBase ID: hsa_circ_0006401; circRNADb ID: hsa_circ_28198; circBank ID: hsa_circCOL6A3_030) in GC metastasis. qRT-PCR analysis using back-splicing primers and Sanger sequencing of PCR products were performed to identify circCOL6A3_030 in GC tissues and cell lines; RNA-FISH assay was performed to validate the subcellular localization of circCOL6A3_030. …”
Publicado 2021
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19544por Ikram, Muhammad, Raja, Naveed Iqbal, Mashwani, Zia-Ur-Rehman, Omar, Ahmad Alsayed, Mohamed, Azza H., Satti, Seema Hassan, Zohra, Efat“…Polymerase chain reactions (PCRs) with specific primers were used to detect HLB disease in ‘Kinnow’ mandarin plants, and PCR products were sequenced to identify Candidatus Liberibacter asiaticus (CLas), and accession numbers for CLas1 and CLas2, MZ851933 and MZ851934, respectively, were obtained. …”
Publicado 2022
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19545por Mukhtar, Maryam, Sheikh, Nadeem, Batool, Andleeb, Khawar, Muhammad Babar, Fatima, Naz, Mehmood, Rabia“…Patients were tested for rs874881, rs11203366, rs11203367, rs2240336, rs2240337, rs2240339, rs1748033 and rs2240340 polymorphic sites by amplifying targeted regions through PCR with site-specific primers. Genotyping was performed by Restriction Fragment Length Polymorphism and direct sequencing method. …”
Publicado 2022
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19546por Scales, N. C., Chase, A. B., Finks, S. S., Malik, A. A., Weihe, C., Allison, S. D., Martiny, A. C., Martiny, J. B. H.“…We first developed and validated Curtobacterium-specific primers of the groEL gene to assess microdiversity within this lineage. …”
Publicado 2022
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19547“…To evaluate relative expression, qRT-PCR was performed using specific primers for β-expansin and reference genes. Physiological characteristics of treated and untreated maize and rice: plant height; fresh weight of anthers; number of inflorescences, anthers, and pollen grains were also recorded. …”
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19548“…DNA was isolated and screened using spectrophotometry for quality (A260:A280 ratio > 1.70) and quantity (concentration > 100 ng). Validated qPCR primers were used to screen repository samples for high-risk HPV strains HPV16 and HPV18. …”
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19549“…Total RNA of Der p was extracted and used to amplify Der p 39 cDNA with specific primers. Recombinant Der p 39 protein was expressed with a pET-His prokaryotic expression system and purified with Ni-NTA resins. …”
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19550por Myczka, Anna W., Kaczor, Stanisław, Filip-Hutsch, Katarzyna, Czopowicz, Michał, Plis-Kuprianowicz, Elwira, Laskowski, Zdzisław“…Bison and moose tissue samples were subjected to 16S rDNA, groEL and ankA partial gene marker amplification with specific primers using various variants of PCR. Out of 42 examined individuals, Anaplasma sp. were detected in 4/13 Eurasian moose (31%) and 7/29 European bison (24%). …”
Publicado 2022
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19551por Klimenko, I.A., Volovik, V.T., Antonov, A.A., Dushkin, V.A., Shamustakimova, A.O., Yu.M. Mavlyutov, Yu.M.“…To genotype 18 gDNA samples, 42 and 25 combinations of respective SSR and SRAP primers were used. The results obtained demonstrate that SRAP markers were more effective for polymorphism analysis: 36 % of the tested markers revealed genetic polymorphism compared with only 16.7 % of microsatellite loci. …”
Publicado 2022
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19552por Wang, Chufang, Ye, Qinghua, Ding, Yu, Zhang, Jumei, Gu, Qihui, Pang, Rui, Zhao, Hui, Wang, Juan, Wu, Qingping“…This study established a real-time PCR method for identifying P. aeruginosa serogroup G strains using novel target gene primers based on comparative genomic analysis. A total of 343 genome sequences, including 16 P. aeruginosa serogroups and 67 other species, were analyzed. …”
Publicado 2022
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19553por Mohamadou, Mansour, Essama, Sarah Riwom, Ngonde Essome, Marie Chantal, Akwah, Lillian, Nadeem, Nudrat, Gonsu Kamga, Hortense, Sattar, Sadia, Javed, Sundus“…Identification of S. aureus was confirmed via 16s rRNA amplification using S. aureus specific primers. Molecular characterisation was performed through mecA gene, Luk PV gene screening and SCCmec typing. …”
Publicado 2022
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19554por Yaraguppi, Deepak A., Bagewadi, Zabin K., Mahanta, Nilkamal, Singh, Surya P., Khan, T. M. Yunus, Deshpande, Sanjay H., Soratur, Chaitra, Das, Simita, Saikia, Dimple“…An iturin A gene sequence was codon-optimized, amplified with gene-specific primers, and ligated into the pET-32A expression vector to achieve high-level protein expression. …”
Publicado 2022
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19555“…In this study, we propose a novel drug delivery system based on HCV-LPs engineered with SP94 and RGD peptides mediated by a specific molecular chaperone (Grp78) associated with cancer drug resistance. The PCR primers were designed for engineering two constructs, SP94-EGFP-CORE-HIS and RGD-EGFP-CORE-HIS, by sequential PCR reactions. …”
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19556por Afsharzadeh, Fatemeh, Zarrinfar, Hossein, Fata, Abdolmajid, Najafzadeh, Mohammad Javad“…The dermatophyte isolates were subjected to a partial polymerase chain reaction (PCR)-sequencing of Tef-1α gene by using specific pan-dermatophyte primers. The data were analysed by SeqMan software, the sequences were compared and aligned with the GenBank database and the isolates were identified. …”
Publicado 2022
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19557por Ott, Pauline, Araúzo-Bravo, Marcos J., Hoffmann, Michèle J., Poyet, Cedric, Bendhack, Marcelo L., Santourlidis, Simeon, Erichsen, Lars“…Conclusions: These findings precisely define the most differentially methylated CpGs of THOR in early urothelial cancer, enabling optimal design of Methylation-Specific PCR (MSPCR) primers to reliably probe these methylation differences for diagnostic and prognostic purposes. …”
Publicado 2022
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19558por Gonzalez, Camille, Oueslati, Saoussen, Biez, Laura, Dortet, Laurent, Naas, Thierry“…The converted bacterial DNA is then added to the 6 PCR mixes, with primers for three targets plus one internal control. …”
Publicado 2022
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19559por Premjet, Duangporn, Boonsrangsom, Thanita, Sujipuli, Kawee, Rattanasut, Kumrop, Kongbungkerd, Anupan, Premjet, Siripong“…To determine genetic variation, nine ‘Nam Wa Mali-Ong’ clones were compared with 10 samples of Musa ABB, AA, and BB cultivars by fingerprinting using seven pairs of sequence-related amplified polymorphism (SRAP) and eight inter simple sequence repeat (ISSR) markers. The SRAP and ISSR primers generated 65 and 76 amplicons, respectively, of which 57 (87.7%) and 62 (81.6%) amplicons, respectively, were polymorphic; the polymorphic information content was 0.28–0.49. …”
Publicado 2022
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19560“…DNA was extracted from potato substrates on both days and sequenced to assess bacterial and fungal diversity using 515F/806R and internal transcribed spacer (ITS) 1/2 primers, respectively, and QIIME 2.0 software. Both total bacterial and MRSA-specific CFU were reduced in the presence of black soldier fly larvae, with a larger reduction for the latter. …”
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