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19781por Aragão, Glicélia Cruz, Mascarenhas, Joana D'Arc Pereira, Kaiano, Jane Haruko Lima, de Lucena, Maria Silvia Sousa, Siqueira, Jones Anderson Monteiro, Fumian, Túlio Machado, Hernandez, Juliana das Mercês, de Oliveira, Consuelo Silva, Oliveira, Darleise de Souza, Araújo, Eliete da Cunha, Soares, Luana da Silva, Linhares, Alexandre Costa, Gabbay, Yvone Benchimol“…Of the 16 NoV-positive samples, 14 were sequenced with primers targeting the B region of the polymerase (ORF1) and the D region of the capsid (ORF2). …”
Publicado 2013
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19782por Kezic, Sanja, O’Regan, Gráinne M., Lutter, René, Jakasa, Ivone, Koster, Ellen S., Saunders, Sean, Caspers, Peter, Kemperman, Patrick M.J.H., Puppels, Gerwin J., Sandilands, Aileen, Chen, Huijia, Campbell, Linda E., Kroboth, Karin, Watson, Rosemarie, Fallon, Padraic G., McLean, W. H. Irwin, Irvine, Alan D.“…RT-PCR was performed using primers specific for murine IL-1α, IL-1β, and IL-1RA. …”
Publicado 2012
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19783por Ma, Qilin, An, Xingkai, Li, Zhiming, Zhang, Huanjing, Huang, Wenqing, Cai, Liangliang, Hu, Peng, Lin, Qing, Tzeng, Chi-Meng“…Genotyping was performed by jointly using primers overlapping polymerase chain reaction (PCR) site-directed mutagenesis, restriction fragment length polymorphism (RFLP), and capillary electrophoresis (CE). …”
Publicado 2013
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19784por Griffiths, Andrew G, Barrett, Brent A, Simon, Deborah, Khan, Anar K, Bickerstaff, Paul, Anderson, Craig B, Franzmayr, Benjamin K, Hancock, Kerry R, Jones, Chris S“…Gene-targeted SSR markers were discovered in a GeneThresher® (TrGT) methyl-filtered database of 364,539 sequences, which yielded 15,647 SSR arrays. Primers were designed for 4,038 arrays and of these, 465 TrGT-SSR markers were used for parental consensus genetic linkage analysis in an F(1) mapping population (MP2). …”
Publicado 2013
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19785por Aliotta, Jason M., Pereira, Mandy, Li, Ming, Amaral, Ashley, Sorokina, Arina, Dooner, Mark S., Sears, Edmund H., Brilliant, Kate, Ramratnam, Bharat, Hixson, Douglas C., Quesenberry, Peter J.“…WBM was harvested at 2-week intervals for real-time RT-PCR analysis, using species-specific surfactant primers, and for Western Blot analysis. Proteomic and microRNA microarray analyses were also performed on cells. …”
Publicado 2012
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19786por Nageswara-Rao, Madhugiri, Kwit, Charles, Agarwal, Sujata, Patton, Mariah T, Skeen, Jordan A, Yuan, Joshua S, Manshardt, Richard M, Stewart, C Neal“…Incorporation of subtle differences in primers and probes for variations in cp worldwide should allow this method to be utilized elsewhere when and if deregulation of transgenic papaya occurs.…”
Publicado 2013
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19787“…A large deletion was detected with real-time quantitative PCR (RQ-PCR) using a panel of primers from regions around the PRPF31 gene. Long-range PCR, followed by DNA sequencing, was used to define the breakpoints. …”
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19788por Sanjuan-Jimenez, Rocio, Morata, Pilar, Bermúdez, Pilar, Bravo, M. José, Colmenero, Juan D.“…CONCLUSIONS/SIGNIFICANCE: In this study, a M RT-PCR strategy with species-specific primers based on senX3-regX3+IS711 sequences proved to be a sensitive and specific test, useful for the highly efficient detection of M. tuberculosis and Brucella spp in very different clinical samples. …”
Publicado 2013
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19789por Nishizawa, Masako, Hattori, Junko, Shiino, Teiichiro, Matano, Tetsuro, Heneine, Walid, Johnson, Jeffrey A., Sugiura, Wataru“…To detect minority populations with drug resistance, we used AS-PCR with mutation-specific primers designed for seven reverse transcriptase inhibitor resistance mutations, M41L, K65R, K70R, K103N, Y181C, M184V, and T215F/Y, and for three protease inhibitor resistance mutations, M46I/L and L90M. …”
Publicado 2013
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19790por Balmer, Jasmin, Ji, Rui, Ray, Thomas A., Selber, Fabia, Gassmann, Max, Peachey, Neal S., Gregg, Ronald G., Enzmann, Volker“…The Gpr179(nob5) allele can be added to the list of background alleles that impact retinal function in commonly used mouse lines. By providing primers to distinguish between Gpr179 mutant and wild-type alleles, this study allows investigators to monitor for the presence of the Gpr179(nob5) mutation in other mouse lines derived from C3H.…”
Publicado 2013
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19791“…Partial coding sequences of 24 sex-related genes were cloned using degenerate primers and were sequenced. Additional 13 cDNA sequences were obtained through next-generation sequencing. …”
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19792por Das, Dhanjit Kumar, Rahate, Subodh G, Mehta, Bhakti P, Gawde, Harshavardhan M, Tamhankar, Parag M“…MATERIALS AND METHODS: The entire coding regions of MAP3K1 were amplified and sequenced using the gene specific primers. RESULTS AND DISCUSSIONS: Sequence analysis of MAP3K1 gene has revealed four variants including one missense, two silent and one deletion mutation. …”
Publicado 2013
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19793“…Fragments of the 18S rRNA gene were amplified by PCR using trypanosome-specific primers and sequenced. Resulting sequence data were compared with each other and with published trypanosome 18S rDNA sequences, and used for phylogenetic analysis. …”
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19794por Dupouey, Julien, Ninove, Laetitia, Ferrier, Vanessa, Py, Odile, Gazin, Céline, Thirion-Perrier, Laurence, de Lamballerie, Xavier“…A sample of 500 BOXTO-positive samples were further tested using the same probe assay (without BOXTO), and a SYBR Green assay (using the same amplification primers). The specific amplification of HRV sequences was assessed by NGS amplicon sequencing. …”
Publicado 2014
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19795por Zeng, Yongbin, Li, Dezhong, Wang, Wei, Su, Mingkuan, Lin, Jinpiao, Chen, Huijuan, Jiang, Ling, Chen, Jing, Yang, Bin, Ou, Qishui“…Real time allele specific locked nucleic acid quantitative PCR (RT-AS-LNA-qPCR) with SYBR Green I was established by LNA-modified primers and evaluated with standard recombinant plasmids, clinical templates (the clinical wild type and mutant HBV DNA mixture) and 102 serum samples from nucleos(t)ide analogues-experienced patients. …”
Publicado 2014
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19796por Akinwale, Olaoluwa P, Hock, Tang T, Chia-Kwung, Fan, Zheng, Qi, Haimo, Shen, Ezeh, Charles, Gyang, Pam V“…MATERIALS AND METHODS: Thus in this study, we developed a new PCR assay using a pair of primers, ShND-1/ShND-2, to amplify a target sequence of 1117 bp (GenBank accession number KF834975) from S. haematobium mitochondrion complete genome (GenBank accession number DQ157222). …”
Publicado 2014
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19797por Berkinbayev, S, Rysuly, M, Mussayev, A, Blum, K, Baitasova, N, Mussagaliyeva, A, Dzhunusbekova, G, Makhatov, B, Mussayev, AA, Yeshmanova, A, Lesbekova, R, Marchuk, Y, Azhibekova, R, Oscar-Berman, M, Kulmaganbetov, M“…Genotyping was performed by polymerase chain reaction (PCR) using oligonucleotide primers identifying; ApoB; ApoC111; and APOE gene polymorphisms. …”
Publicado 2014
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19798“…To confirm their existence in genome, they were redetected with primers matching their variable regions. PCR systems aimed to roughly detect any eukaryotes and prokaryotes respectively were also applied to search for other pathogens in one of four patients. …”
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19799por Zhang, Huiming, Tang, Kai, Wang, Bangshing, Duan, Cheng-Guo, Lang, Zhaobo, Zhu, Jian-Kang“…An alternative approach is RT-qPCR that employs stem loop primers during reverse transcription; however, it requires a prerequisite that the exact sequences of siRNAs should be known. …”
Publicado 2014
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19800“…This study systematically investigated whether CD44 expression patterns are involved in pancreatic carcinoma metastasis and prognosis. METHODS: We applied primers specific for all CD44 variants and CD44s to analyze the expression patterns of CD44 (CD44v2-CD44v10 and CD44s) using quantitative real-time PCR (qRT-PCR). …”
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