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3261por Mokrushina, Yuliana A., Golovin, Andrey V., Smirnov, Ivan V., Chatziefthimiou, Spyros D., Stepanova, Anastasia V., Bobik, Tatyana V., Zalevsky, Arthur O., Zlobin, Alexander S., Konovalov, Kirill A., Terekhov, Stanislav S., Stepanov, Alexey V., Pipiya, Sofiya O., Shamborant, Olga G., Round, Ekaterina, Belogurov, Alexey A., Bourenkov, Gleb, Makarov, Alexander A., Wilmanns, Matthias, Xie, Jia, Blackburn, G. Michael, Gabibov, Alexander G., Lerner, Richard A.“…Quantum mechanics/molecular mechanics (QM/MM) maturation of an immunoglobulin (Ig) powered by supercomputation delivers novel functionality to this catalytic template and facilitates artificial evolution of biocatalysts. …”
Publicado 2020
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3262por Khrennikov, Andrei“…As already pointed out by Einstein, the quantum paradoxes disappear if one adopts the purely statistical interpretation of quantum mechanics (QM). In the statistical interpretation of QM, if probabilities are considered to be objective properties of random experiments we show that the Lüders projection corresponds to the passage from joint probabilities describing all set of data to some marginal conditional probabilities describing some particular subsets of data. …”
Publicado 2020
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3263por Broser, Matthias, Spreen, Anika, Konold, Patrick E., Peter, Enrico, Adam, Suliman, Borin, Veniamin, Schapiro, Igor, Seifert, Reinhard, Kennis, John T. M., Bernal Sierra, Yinth Andrea, Hegemann, Peter“…Site-specific mutagenesis and hybrid quantum mechanics/molecular mechanics simulations support the idea that the unusual photochemical properties result from the rigidity of the retinal chromophore and a unique counterion triad composed of two glutamic and one aspartic acids. …”
Publicado 2020
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3264por Sowińska, Agata, Vasquez, Luis, Żaczek, Szymon, Manna, Rabindra Nath, Tuñón, Iñaki, Dybala-Defratyka, Agnieszka“…A detailed investigation of the conformational space of LinA substates has been accompanied by description of enzymatic catalytic steps carried out using a hybrid quantum mechanics/molecular mechanics (QM/MM) potential along with the computation of the potential of mean force (PMF) to estimate the free energy barriers for the studied transformations: dehydrochlorination of γ-, (−)-α-, and (+)-α-HCH by LinA-type I and -type II variants. …”
Publicado 2020
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3265“…[Image: see text] We report the transition metal quantum mechanics (tmQM) data set, which contains the geometries and properties of a large transition metal–organic compound space. tmQM comprises 86,665 mononuclear complexes extracted from the Cambridge Structural Database, including Werner, bioinorganic, and organometallic complexes based on a large variety of organic ligands and 30 transition metals (the 3d, 4d, and 5d from groups 3 to 12). …”
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3266por Machado, Teresa F. G., Purg, Miha, McMahon, Stephen A., Read, Benjamin J., Oehler, Verena, Åqvist, Johan, Gloster, Tracey M., da Silva, Rafael G.“…Here, a combination of kinetic isotope effects, protein crystallography, and quantum mechanics/molecular mechanics (QM/MM) calculations were employed to dissect the HBDH mechanism. …”
Publicado 2020
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3267por Skotnicki, Konrad, Ostrowski, Slawomir, Dobrowolski, Jan Cz., De la Fuente, Julio R., Cañete, Alvaro, Bobrowski, Krzysztof“…The optimized structures of the radical cations (7-R-3-MeQ)(●+), radicals (7-R-3-MeQ)(●) and N(3)(●) adducts at the C2 carbon atom in pyrazine moiety and their absorption spectra are reasonably well reproduced by density functional theory quantum mechanics calculations employing the ωB97XD functional combined with the Dunning’s aug-cc-pVTZ correlation-consistent polarized basis sets augmented with diffuse functions.…”
Publicado 2021
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3268por Phintha, Aisaraphon, Prakinee, Kridsadakorn, Jaruwat, Aritsara, Lawan, Narin, Visitsatthawong, Surawit, Kantiwiriyawanitch, Chadaporn, Songsungthong, Warangkhana, Trisrivirat, Duangthip, Chenprakhon, Pirom, Mulholland, Adrian, van Pée, Karl-Heinz, Chitnumsub, Penchit, Chaiyen, Pimchai“…Here, we investigated the reaction mechanisms and structures of tryptophan 6-halogenase (Thal) from Streptomyces albogriseolus using stopped-flow, rapid-quench flow, quantum/mechanics molecular mechanics calculations, crystallography, and detection of intermediate (hypohalous acid [HOX]) liberation. …”
Publicado 2020
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3269por Al-Wahaibi, Lamya H., Rahul, Bavanandan, Mohamed, Ahmed A. B., Abdelbaky, Mohammed S. M., Garcia-Granda, Santiago, El-Emam, Ali A., Percino, M. Judith, Thamotharan, Subbiah“…The title compound possesses selective inhibitory activity against human COX-2 enzyme rather than COX-1. The quantum mechanics (QM) polarized ligand docking analysis was used to predict the binding pose and study the title compound’s selectivity against COX-1/2 enzymes.…”
Publicado 2021
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3270“…Entangled photon pairs are a fundamental component for testing the foundations of quantum mechanics, and for modern quantum technologies such as teleportation and secured communication. …”
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3271por Röllen, Katrin, Granzin, Joachim, Remeeva, Alina, Davari, Mehdi D., Gensch, Thomas, Nazarenko, Vera V., Kovalev, Kirill, Bogorodskiy, Andrey, Borshchevskiy, Valentin, Hemmer, Stefanie, Schwaneberg, Ulrich, Gordeliy, Valentin, Jaeger, Karl-Erich, Batra-Safferling, Renu, Gushchin, Ivan, Krauss, Ulrich“…Using spectroscopy, X-ray crystallography, and quantum mechanics molecular mechanics calculations, we provide a firm structural and functional understanding of spectral tuning in FbFPs. …”
Publicado 2021
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3272por Massillon-JL, G.“…This paper presents some methodologies based on fundamental quantum mechanics which can be considered useful for dealing with low-energy interactions.…”
Publicado 2021
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3273por Yañez, Osvaldo, Osorio, Manuel Isaías, Areche, Carlos, Vasquez-Espinal, Alejandro, Bravo, Jessica, Sandoval-Aldana, Angélica, Pérez-Donoso, José M., González-Nilo, Fernando, Matos, Maria João, Osorio, Edison, García-Beltrán, Olimpo, Tiznado, William“…Using molecular docking and quantum mechanics calculations, the chemical properties and binding efficiency of each ligand was evaluated, which allowed the selection of 5 compounds of this series. …”
Publicado 2021
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3274“…In this work, we demonstrate a multiscale quantum mechanics/molecular mechanics (QM/MM) approach utilizing full time-dependent density functional theory with modern range-separated functionals to compute for the first time the excitation energies of all CP47 chlorophylls in a complete membrane-embedded cyanobacterial PSII dimer. …”
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3275“…Quantum channels in free-space, an essential prerequisite for fundamental tests of quantum mechanics and quantum technologies in open space, have so far been based on direct line-of-sight because the predominant approaches for photon-encoding, including polarization and spatial modes, are not compatible with randomly scattered photons. …”
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3276por Soto-Ospina, Alejandro, Araque Marín, Pedronel, Bedoya, Gabriel, Sepulveda-Falla, Diego, Villegas Lanau, Andrés“…For this, we used a quantum mechanics/molecular mechanics (QM/MM) hybrid method, evaluating modifications in the topology, potential surface density, and electrostatic potential map of mutated PS1 proteins. …”
Publicado 2021
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3277por Ball, Philip“…For many decades since its inception in the early twentieth century, quantum mechanics seemed to be an exotic and peculiarly non-intuitive kind of physics that applied to matter at the smallest scales: the laws that govern atoms, photons and subatomic particles. …”
Publicado 2019
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3278por Umar, Haruna Isiyaku, Ajayi, Adeola, Bello, Ridwan Opeyemi, Alabere, Hafsat Olateju, Sanusi, Afees Akinbode, Awolaja, Olamide Olusegun, Alshehri, Mohammed Mansour, Chukwuemeka, Prosper Obed“…The in silico pharmacokinetic features were predicted and finally, quantum mechanics/molecular mechanics (QM/MM) study was carried out using Molecular Orbital Package 2016 (MOPAC2016) on the overall hit compound with controls to determine the stability and reactivity of the lead molecule. …”
Publicado 2021
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3279“…Multiphoton interference is an important phenomenon in modern quantum mechanics and experimental quantum optics, and it is fundamental for the development of quantum information science and technologies. …”
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3280“…Consequently, BVPs frequently emerge in nearly every engineering discipline and span problem domains including fluid mechanics, electromagnetics, quantum mechanics, and elasticity. The fundamental solution, or Green’s function, is a leading method for solving linear BVPs that enables facile computation of new solutions to systems under any external forcing. …”
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