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2341“…However, most PLMs are trained only on sequence data and lack protein 3D structure information. The lack of such crucial 3D structure information hampers the prediction capacity of PLMs in various applications, especially those heavily depending on the 3D structure. …”
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2342“…The ray tracing method is evaluated against a number of example cases representing structural details such as thickness changes, stringers, or simulated damage, and the significance of ray tracing to study wave propagation under these conditions and how it can serve as a valuable tool for structural health monitoring are highlighted. …”
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2343por Goel, Kapil Kumar, Thapliyal, Somesh, Kharb, Rajeev, Joshi, Gaurav, Negi, Arvind, Kumar, Bhupinder“…The focus of the study is to provide structural insights into imidazole-based derivatives as serotonergic system modulators for the treatment of depression.…”
Publicado 2023
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2344“…The structures of four salt forms of dopamine are reported. …”
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2345“…In this work, we analyse the potential for using structural knowledge to improve the detection of the DNA-binding helix–turn–helix (HTH) motif from sequence. …”
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2346por von Grotthuss, Marcin, Plewczynski, Dariusz, Ginalski, Krzysztof, Rychlewski, Leszek, Shakhnovich, Eugene I“…BACKGROUND: The number of protein structures from structural genomics centers dramatically increases in the Protein Data Bank (PDB). …”
Publicado 2006
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2347“…BACKGROUND: Structural properties of proteins such as secondary structure and solvent accessibility contribute to three-dimensional structure prediction, not only in the ab initio case but also when homology information to known structures is available. …”
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2348por Delatorre, Plínio, Rocha, Bruno AM, Souza, Emmanuel P, Oliveira, Taianá M, Bezerra, Gustavo A, Moreno, Frederico BMB, Freitas, Beatriz T, Santi-Gadelha, Tatiane, Sampaio, Alexandre H, Azevedo, Walter F, Cavada, Benildo S“…Analysis of the electron density maps of the CGL structure shows clearly the presence of Abu, which was confirmed by mass spectrometry. …”
Publicado 2007
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2349
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2350“…Peptide maps indicated that the light chains had an entirely different primary structure than the heavy chains, but that the corresponding chains of 7S and 17S dogfish serum immunoglobulins were similar in primary structure. …”
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2351por Rebhun, Lionel I.“…The electron microscope shows many of these structures to be composed of double walled lamellae arranged in space, in various ways. …”
Publicado 1956
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2352PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotationpor Montgomerie, Scott, Cruz, Joseph A., Shrivastava, Savita, Arndt, David, Berjanskii, Mark, Wishart, David S.“…PROTEUS2 is a web server designed to support comprehensive protein structure prediction and structure-based annotation. …”
Publicado 2008
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2353“…Although few computational methods are available for the prediction of structurally conserved residues from protein structure, almost all methods require homologous structural information and structure-based alignments, which still prove to be a bottleneck in protein structure comparison studies. …”
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2354
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2355“…Motivation: Exploitation of locally similar 3D patterns of physicochemical properties on the surface of a protein for detection of binding sites that may lack sequence and global structural conservation. Results: An algorithm, ProBiS is described that detects structurally similar sites on protein surfaces by local surface structure alignment. …”
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2356por Marsico, Annalisa, Henschel, Andreas, Winter, Christof, Tuukkanen, Anne, Vassilev, Boris, Scheubert, Kerstin, Schroeder, Michael“…RESULTS: We introduce a technique called structural fragment clustering, which learns sequential motifs from 3D structural fragments. …”
Publicado 2010
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2357“…Therefore, to understand the cause of pathogenicity of H1N1 virus, we have studied the structure-function relationship of different domains of NP. …”
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2358por Bryan, Allen W, O’Donnell, Charles W, Menke, Matthew, Cowen, Lenore J, Lindquist, Susan, Berger, Bonnie“…A dynamic program computes the top 50 structures and returns both the highest scoring structure and a consensus structure taken by polling this list for common discrete elements. …”
Publicado 2012
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2359“…Recent work has shown that NMR structures can be determined by integrating sparse NMR data with structure prediction methods such as Rosetta. …”
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2360por Fiorillo, Annarita, Colotti, Gianni, Boffi, Alberto, Baiocco, Paola, Ilari, Andrea“…Structural analyses bring out key structural features to elucidate LmTXN and LmTXNPx function. …”
Publicado 2012
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