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4301“…We used laboratory experiments to examine the impact of tail autotomy on locomotor performance, activity and basking site selection in two lizard species, the delicate skink (Lampropholis delicata) and garden skink (L. guichenoti), that occur sympatrically throughout southeastern Australia and are exposed to an identical suite of potential predators. Post-autotomy tail movement did not differ between the two Lampropholis species, although a positive relationship between the shed tail length and distance moved, but not the duration of movement, was observed. …”
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4302“…The cosmopolitan nature of the macroalgae studied, and their ability to grow and concentrate a suite of heavy metals from industrial wastes, highlights a clear benefit in the practical application of waste water bioremediation.…”
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4303por Cretoiu, Mariana Silvia, Kielak, Anna Maria, Al-Soud, Waleed Abu, Sørensen, Søren J., van Elsas, Jan Dirk“…Conversely, there were habitat-specific differences. In addition, a suite of sequences were obtained that are as yet unregistered in the chitinase database. …”
Publicado 2012
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4304por Bron, Peter A., Wels, Michiel, Bongers, Roger S., van Bokhorst-van de Veen, Hermien, Wiersma, Anne, Overmars, Lex, Marco, Maria L., Kleerebezem, Michiel“…A data-storage and -mining suite designated FermDB was constructed and exploited to identify correlations between fermentation conditions and industrially relevant physiological characteristics of L. plantarum, as well as the associated transcriptome signatures. …”
Publicado 2012
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4305por Doyle, Erin L., Booher, Nicholas J., Standage, Daniel S., Voytas, Daniel F., Brendel, Volker P., VanDyk, John K., Bogdanove, Adam J.“…A TAL effector-nucleotide binding code that links repeat type to specified nucleotide enables prediction of genomic binding sites for TAL effectors and customization of TAL effectors for use in DNA targeting, in particular as custom transcription factors for engineered gene regulation and as site-specific nucleases for genome editing. We have developed a suite of web-based tools called TAL Effector-Nucleotide Targeter 2.0 (TALE-NT 2.0; https://boglab.plp.iastate.edu/) that enables design of custom TAL effector repeat arrays for desired targets and prediction of TAL effector binding sites, ranked by likelihood, in a genome, promoterome or other sequence of interest. …”
Publicado 2012
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4306por Cutts, Rosalind J., Dayem Ullah, Abu Z., Sangaralingam, Ajanthah, Gadaleta, Emanuela, Lemoine, Nicholas R., Chelala, Claude“…It provides a strong analytical suite able to overlay and harness large, complicated, raw and heterogeneous sets of profiles with biological/clinical data. …”
Publicado 2012
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4307por Badve, Sunil, Goswami, Chirayu, Gökmen–Polar, Yesim, Nelson, Robert P., Henley, John, Miller, Nick, Zaheer, Narjis A., Sledge, George W., Li, Lang, Kesler, Kenneth A., Loehrer, Patrick J.“…Using the Illumina BeadStudio® platform and Human Ref-8 Beadchip, gene expression data was analyzed with Partek Genomics Suite®, and Ingenuity Pathways Analysis (IPA). Unsupervised clustering of gene expression data, representing one of the largest series in literature, resulted in identification of four molecular clusters of tumors (C1–C4), which correlated with histology (P = 0.002). …”
Publicado 2012
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4308“…RESULTS: We developed a software application suite, NetWalker, as a one-stop platform featuring a number of novel holistic (i.e. assesses the whole data distribution without requiring data cutoffs) data integration and analysis methods for network-based comparative interpretations of genome-scale data. …”
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4309por Mander, Luke, Wesseln, Cassandra J., McElwain, Jennifer C., Punyasena, Surangi W.“…The interpretation of biotic changes in the geological past relies on the assumption that samples from different time intervals represent an equivalent suite of natural sampling conditions. As a result, detailed investigations of taphonomic regimes during intervals of major biotic upheaval, such as mass extinctions, are crucial. …”
Publicado 2012
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4310“…Its closest allies are a suite of Asian Dryopteris Adans. species including Dryopteris labordei, Dryopteris gymnosora, Dryopteris erythrosora and Dryopteris cystolepidota; maintaining Revwattsia renders Dryopteris paraphyletic. …”
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4311“…Thirty-seven women (aged 19–85) living in a disadvantaged neighborhood, and five key stakeholders, received a suite of potential intervention materials and completed a qualitative questionnaire assessing the perceived feasibility of strategies aimed to increase physical activity and reduce sedentary behavior. …”
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4312por Voigt, Jörn, Krause, Christopher, Rohwäder, Edda, Saschenbrecker, Sandra, Hahn, Melanie, Danckwardt, Maick, Feirer, Christian, Ens, Konstantin, Fechner, Kai, Barth, Erhardt, Martinetz, Thomas, Stöcker, Winfried“…Therefore, the EUROPattern Suite has been developed as a comprehensive automated processing and interpretation system for standardized and efficient ANA detection by HEp-2 cell-based IIF. …”
Publicado 2012
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4313“…Plants use light as a source of information via a suite of photomorphogenic photoreceptors to optimize growth in response to their light environment. …”
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4314por Lautenschlager, Stephan, Rayfield, Emily J., Altangerel, Perle, Zanno, Lindsay E., Witmer, Lawrence M.“…BACKGROUND: Therizinosauria is one of the most enigmatic and peculiar clades among theropod dinosaurs, exhibiting an unusual suite of characters, such as lanceolate teeth, a rostral rhamphotheca, long manual claws, and a wide, opisthopubic pelvis. …”
Publicado 2012
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4315Publicado 2013“…NCBI resources include Entrez, the Entrez Programming Utilities, MyNCBI, PubMed, PubMed Central, Gene, the NCBI Taxonomy Browser, BLAST, BLAST Link (BLink), Primer-BLAST, COBALT, Splign, RefSeq, UniGene, HomoloGene, ProtEST, dbMHC, dbSNP, dbVar, Epigenomics, the Genetic Testing Registry, Genome and related tools, the Map Viewer, Model Maker, Evidence Viewer, Trace Archive, Sequence Read Archive, BioProject, BioSample, Retroviral Genotyping Tools, HIV-1/Human Protein Interaction Database, Gene Expression Omnibus, Probe, Online Mendelian Inheritance in Animals, the Molecular Modeling Database, the Conserved Domain Database, the Conserved Domain Architecture Retrieval Tool, Biosystems, Protein Clusters and the PubChem suite of small molecule databases. Augmenting many of the web applications are custom implementations of the BLAST program optimized to search specialized data sets. …”
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4316por Raynaud, Christophe M., Halabi, Najeeb, Elliott, David A., Pasquier, Jennifer, Elefanty, Andrew G., Stanley, Edouard G., Rafii, Arash“…Gene profiling experiments revealed that, although hESC-MP derived cells expressed a suite of cardiac related genes, they lacked the complete repertoire of genes associated with bona fide cardiomyocytes. …”
Publicado 2013
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4317por Ramachandran, Parameswaran, Palidwor, Gareth A., Porter, Christopher J., Perkins, Theodore J.“…We analyze the computational complexity of this approach, and evaluate its performance on a test suite of NGS datasets, demonstrating its superiority to traditional cross-correlation analysis. …”
Publicado 2013
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4318“…Upon applying this strategy to 47,524 mammalian CoxI sequences, we resolve a suite of potentially problematic sequences. Our study reveals that erroneous sequences are not rare in GenBank and that the DNA barcoding can serve to confirm sequencing accuracy and discover problems such as misidentified species, inaccurate taxonomies, contamination, and potential errors in sequencing.…”
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4319por Nilsen, Gro, Liestøl, Knut, Loo, Peter Van, Moen Vollan, Hans Kristian, Eide, Marianne B, Rueda, Oscar M, Chin, Suet-Feung, Russell, Roslin, Baumbusch, Lars O, Caldas, Carlos, Børresen-Dale, Anne-Lise, Lingjærde, Ole Christian“…CONCLUSIONS: The R package copynumber is a software suite for segmentation of single- and multi-track copy number data using algorithms based on coherent least squares principles.…”
Publicado 2012
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4320“…The plug-in was tested using a suite of 53 different test cases that covers almost all possible entities, shapes, and connections. …”
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