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  1. 6561
    “…Linkage groups 1 and 2 had QTLs for a suite of traits including pod size, germination, seed size and lower stem length. …”
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    Genome Dissection of Traits Related to Domestication in Azuki Bean (Vigna angularis) and Comparison with other Warm-season Legumes
  2. 6562
    “…RESULTS: We describe here Gene ARMADA (Automated Robust MicroArray Data Analysis), a MATLAB implemented platform with a Graphical User Interface. This suite integrates all steps of microarray data analysis including automated data import, noise correction and filtering, normalization, statistical selection of differentially expressed genes, clustering, classification and annotation. …”
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    Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB
  3. 6563
    “…Genomes of myo- and podoviruses isolated on Prochlorococcus contain DNA replication machinery and virion structural genes homologous to those from coliphages T4 and T7 respectively. They also contain a suite of genes of cyanobacterial origin, most notably photosynthesis genes, which are expressed during infection and appear integral to the evolutionary trajectory of both host and phage. …”
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    The genome and structural proteome of an ocean siphovirus: a new window into the cyanobacterial ‘mobilome’
  4. 6564
    “…The objective of this study is to present a unified approach that can be used to characterize endemic and outbreak patterns of shigellosis using use a suite of epidemiologic and molecular techniques. …”
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    A unified approach to molecular epidemiology investigations: tools and patterns in California as a case study for endemic shigellosis
  5. 6565
    “…M. sexta larvae regulated transcripts in a diet-specific manner, while H. virescens larvae regulated a similar suite of transcripts across all diet types. CONCLUSIONS/SIGNIFICANCE: The observations are consistent with the expectation that specialists are better adapted than generalist herbivores to the defense responses elicited in their host plants by their feeding. …”
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    Unbiased Transcriptional Comparisons of Generalist and Specialist Herbivores Feeding on Progressively Defenseless Nicotiana attenuata Plants
  6. 6566
    “…NCBI resources include Entrez, the Entrez Programming Utilities, MyNCBI, PubMed, PubMed Central, Entrez Gene, the NCBI Taxonomy Browser, BLAST, BLAST Link (BLink), Electronic PCR, OrfFinder, Spidey, Splign, Reference Sequence, UniGene, HomoloGene, ProtEST, dbMHC, dbSNP, Cancer Chromosomes, Entrez Genomes and related tools, the Map Viewer, Model Maker, Evidence Viewer, Trace Archive, Sequence Read Archive, Retroviral Genotyping Tools, HIV-1/Human Protein Interaction Database, Gene Expression Omnibus, Entrez Probe, GENSAT, Online Mendelian Inheritance in Man, Online Mendelian Inheritance in Animals, the Molecular Modeling Database, the Conserved Domain Database, the Conserved Domain Architecture Retrieval Tool, Biosystems, Peptidome, Protein Clusters and the PubChem suite of small molecule databases. Augmenting many of the web applications are custom implementations of the BLAST program optimized to search specialized data sets. …”
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    Database resources of the National Center for Biotechnology Information
  7. 6567
    “…RESULTS: We developed a suite of software tools and resources (CNV Workshop) for automated, genome-wide CNV detection from a variety of SNP array platforms. …”
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    CNV Workshop: an integrated platform for high-throughput copy number variation discovery and clinical diagnostics
  8. 6568
    “…In addition, we developed PedHunter, a suite of query software that can solve pedigree-related problems automatically and systematically. …”
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    PedHunter 2.0 and its usage to characterize the founder structure of the Old Order Amish of Lancaster County
  9. 6569
    “…RESULTS: We present WATERS, an integrated approach for 16 S rDNA analysis that bundles a suite of publicly available 16 S rDNA analysis software tools into a single software package. …”
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    Introducing W.A.T.E.R.S.: a Workflow for the Alignment, Taxonomy, and Ecology of Ribosomal Sequences
  10. 6570
    “…FINDINGS: We have developed ANDES, a software library and a suite of applications, written in Perl and R, for the statistical ANalyses of DEep Sequencing. …”
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    ANDES: Statistical tools for the ANalyses of DEep Sequencing
  11. 6571
    “…Active recombination among these copies produces a suite of alternative genome configurations that appear to be at or near "recombinational equilibrium". …”
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    Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia
  12. 6572
    “…Our findings herein not only provide confirmatory evidences for previously findings, but also explore a suite of novel SNPs associated with milk production traits, and thus form a solid basis for eventually unraveling the causal mutations for milk production traits in dairy cattle.…”
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    Genome Wide Association Studies for Milk Production Traits in Chinese Holstein Population
  13. 6573
    “…SETTING: Patients attending flexible fibreoptic bronchoscopy appointments at the bronchoscopy suite, Respiratory Unit, Universiti Kebangsaan Malaysia Medical Centre (UKMMC), Cheras, Kuala Lumpur, Malaysia between March and September 2006. …”
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    Can a bronchoscopist reliably assess a patient's experience of bronchoscopy?
  14. 6574
    “…The LabelHash algorithm is available through a web server and as a suite of standalone programs at http://labelhash.kavrakilab.org. …”
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    The LabelHash algorithm for substructure matching
  15. 6575
    “…The availability of meta-association and haplotype-mining modules in our suite of Monte Carlo haplotype procedures adds further value to the approach.…”
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    Haplotype association analyses in resources of mixed structure using Monte Carlo testing
  16. 6576
    “…CONCLUSION: Apart from regulating a suite of circadian transcripts in a time-of-day dependent manner AtGRP7, both directly and indirectly, affects other transcripts including transcripts responsive to abiotic and biotic stimuli. …”
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    Global transcript profiling of transgenic plants constitutively overexpressing the RNA-binding protein AtGRP7
  17. 6577
    “…Our results show that P. mugo has moved into quite distinct habitats and is able to adapt a suite of ECM symbionts that sufficiently support growth and development of this tree and allow for natural seedling regeneration.…”
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    Ectomycorrhizal fungal communities on seedlings and conspecific trees of Pinus mugo grown on the coastal dunes of the Curonian Spit in Lithuania
  18. 6578
    “…Further work with longer-term sampling and a larger suite of analytes is advised in order to better elucidate the determinants of oxidative potential, and to fuller explore the contrasts between site types.…”
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    Increased Oxidative Burden Associated with Traffic Component of Ambient Particulate Matter at Roadside and Urban Background Schools Sites in London
  19. 6579
    “…We also report the availability of Datgan, the suite of scripts that was developed to construct GDP. …”
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    Datgan, a reusable software system for facile interrogation and visualization of complex transcription profiling data
  20. 6580
    “…The structure-based method via PolyPhen server indicated that 135 (40%) non-synonymous polymorphism may modify protein function and structure. The Pupa Suite software showed that the SNPs will have a phenotypic consequence on the structure and function of the altered protein. …”
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    In Silico Analysis of Single Nucleotide Polymorphism (SNPs) in Human β-Globin Gene
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