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7021por Lokwani, Deepak K., Sarkate, Aniket P., Karnik, Kshipra S., Nikalje, Anna Pratima G., Seijas, Julio A.“…Herein, we demonstrated and compared the ability of the Glide extra precision (XP) and Induced Fit docking (IFD) tool of Schrodinger software suite to reproduce the binding mode of co-crystallized ligands into six X-ray crystallographic structures. …”
Publicado 2020
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7022por Giacomelli, Elena, Dorigo, Walter, Fargion, Aaron, Calugi, Gianmarco, Cianchi, Giovanni, Pratesi, Carlo“…An urgent angio-computed tomography scan for revascularization purpose was requested, but the patient died on the arrival in the radiological suite. CONCLUSIONS: Acute thrombosis of vascular prosthetic grafts is a possible, catastrophic complication of COVID-19 infection. …”
Publicado 2020
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7023por Magee, Laura A., Strang, Amber, Li, Larry, Tu, Domena, Tumtaweetikul, Warancha, Craik, Rachel, Daniele, Marina, Etyang, Angela Koech, D’Alessandro, Umberto, Ogochukwu, Ofordile, Roca, Anna, Sevene, Esperança, Chin, Paulo, Tchavana, Corssino, Temmerman, Marleen, von Dadelszen, Peter“…In addition, the database has a suite of additional modules for ‘deep phenotyping’ based on established tools. …”
Publicado 2020
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7024por Feldmann, Mitchell J, Hardigan, Michael A, Famula, Randi A, López, Cindy M, Tabb, Amy, Cole, Glenn S, Knapp, Steven J“…We extracted 68 quantitative features from digital images of strawberries using a suite of morphometric analyses and multivariate statistical approaches. …”
Publicado 2020
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7025“…Docking study was performed using Maestro interface (Schrödinger Suite, LLC, NY). KEY FINDINGS: Out of these 61 molecules, 37 molecules were found to interact with >2 protein structures of COVID-19. …”
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7026por Koehler Leman, Julia, Weitzner, Brian D., Renfrew, P. Douglas, Lewis, Steven M., Moretti, Rocco, Watkins, Andrew M., Mulligan, Vikram Khipple, Lyskov, Sergey, Adolf-Bryfogle, Jared, Labonte, Jason W., Krys, Justyna, Bystroff, Christopher, Schief, William, Gront, Dominik, Schueler-Furman, Ora, Baker, David, Bradley, Philip, Dunbrack, Roland, Kortemme, Tanja, Leaver-Fay, Andrew, Strauss, Charlie E. M., Meiler, Jens, Kuhlman, Brian, Gray, Jeffrey J., Bonneau, Richard“…Rosetta is one of the largest software suites for macromolecular modeling, with 3.1 million lines of code and many state-of-the-art applications. …”
Publicado 2020
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7027“…The pathogenic yeast Candida glabrata is reliant on a suite of cell surface adhesins that play a variety of roles necessary for transmission, establishment and proliferation during infection. …”
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7028“…All doctors in training (DITs) (N = 28) and midwives (N = 69) working in the delivery suite were invited to participate. Wellbeing was assessed by measuring burnout, compassion fatigue, and perceived stress using validated questionnaires. …”
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7029“…We propose that this Triassic fault system acted as a suite of methane migration conduits and was the prerequisite step for further seafloor deformations triggered by rapid gas hydrate dissociation some 15–12 ka BP. …”
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7030por Cantu, Daniel A., Wang, Bo, Gongwer, Michael W., He, Cynthia X., Goel, Anubhuti, Suresh, Anand, Kourdougli, Nazim, Arroyo, Erica D., Zeiger, William, Portera-Cailliau, Carlos“…Although the panorama is changing with recent tools like CaImAn, Suite2P, and others, there is still a barrier for many laboratories to adopt these packages, especially for potential users without sophisticated programming skills. …”
Publicado 2020
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7031por Patnaik, Debasis“…DATA DESCRIPTION: Nearly 2.4 million molecules from various chemical libraries were screened with the SRA domain of UHRF1 using Schrodinger’s Small Molecule Drug Discovery Suite. The data is available in the form of a methodology presentation, MS Excel files listing the top hits, and Maestro pose viewer files that provide visualization of how the identified ligands interact with the SRA domain.…”
Publicado 2020
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7032por Goenka, Mahesh K., Afzalpurkar, Shivaraj, Ghoshal, Uday C., Guda, Nalini, Reddy, Nageshwar“…Only 18.3 % of respondents had access to negative pressure rooms either within (5.4 %) or outside (12.9 %) the usual endoscopy suite. Conclusion Endoscopy units in India are performing fewer than 10 % of their usual volumes due to current restrictions. …”
Publicado 2020
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7033“…The data also revealed cultivar specific effects of AMF symbiosis that increase understanding of genotype related differences. Additionally, a suite of proteins and secondary metabolites are presented, induced in seeds of P. sativum upon AMF-colonization and pathogen attack, and possibly involved in induced systemic resistance against D. pinodes, useful for modern breeding strategies implementing microsymbionts toward increased pathogen resistance.…”
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7034por Wilson, Abbey E, Michaud, Sarah A, Jackson, Angela M, Stenhouse, Gordon, Coops, Nicholas C, Janz, David M“…We hypothesized that a suite of target proteins could be measured using this technique and that the expression of these proteins would be associated with biological (sex, age, sample location on body) and environmental (geographic area, season, sample year) variables. …”
Publicado 2020
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7035por Matos, Felipe de Souza, da Silva, Fabrício Rutz, Paranhos, Luiz Renato, Moura, Camilla Christian Gomes, Bresciani, Eduardo, Valera, Marcia Carneiro“…Images were assessed at distances of 2 mm (apical), 5 mm (middle), and 8 mm (coronal) from the apex with the Leica Application Suite V4.10 software. The EDTA + PUI and QMiX + PUI protocols presented higher rates of debris/smear layer removal in the apical and middle thirds. …”
Publicado 2020
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7036por Becker, Elizabeth A., Carretta, James V., Forney, Karin A., Barlow, Jay, Brodie, Stephanie, Hoopes, Ryan, Jacox, Michael G., Maxwell, Sara M., Redfern, Jessica V., Sisson, Nicholas B., Welch, Heather, Hazen, Elliott L.“…We compared both the explanatory power (i.e., model goodness of fit) and predictive power (i.e., performance on a novel dataset) of the GAMs and BRTs for a taxonomically diverse suite of cetacean species using a robust set of systematic survey data (1991–2014) within the California Current Ecosystem. …”
Publicado 2020
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7037por Sutcliffe, Rachel L., Li, Shaorong, Gilbert, Matthew J. H., Schulte, Patricia M., Miller, Kristi M., Farrell, Anthony P.“…Using this serendipitous opportunity, we compared mRNA expression changes of a suite of proteins in sinoatrial node (SAN), atrial and ventricular tissues after both 1 h and longer than 3 weeks for both experimental acclimation groups to identify those changes only associated with pacemaker rate resetting. …”
Publicado 2020
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7038por Ren, Dandan, Nemati, Zahra, Lee, Chia-Hung, Li, Jinfeng, Haddadi, Kamel, Wallace, Douglas C., Burke, Peter J.“…The interface could have a variety of applications in interfacing life sciences to nano-electronics, including electronic assays of membrane potential dynamics, nano-electronic actuation of cellular activity, and tomographic, nano-radar imaging of the morphology of vital organelles in the cytoplasm, during all phases of the cell life cycle (from development to senescence), under a variety of physiological environments, and under a broad suite of pharmacological manipulations.…”
Publicado 2020
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7039“…We develop a method to quantify this behavioural variation, describing the key drivers and providing a tool to account for biases in models that use these data. We used a suite of metrics to describe the temporal and spatial behaviour of participants, as well as variation in the data they collected. …”
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7040por Daood, Umer, Matinlinna, Jukka P., Pichika, Malikarjuna Rao, Mak, Kit-Kay, Nagendrababu, Venkateshbabu, Fawzy, Amr S.“…Small-molecule drug discovery-suite was used to analyze QAS/Sortase-A active site. …”
Publicado 2020
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